Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0128.Seq
         (459 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    25   0.45 
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   3.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   5.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   9.6  

>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 24.6 bits (51), Expect = 0.45
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -1

Query: 426 WIYVLLLRCMDELTAHLVLNSXWSP 352
           WI + L+R M ++T +LVL    SP
Sbjct: 308 WIVLHLIRLMYQVTTNLVLKLLTSP 332


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 3.2
 Identities = 8/33 (24%), Positives = 12/33 (36%)
 Frame = +2

Query: 65  NAHTTLNPCVPTCADPELKHTSCVTXFIATCHC 163
           N    +N C  +C           T F+  C+C
Sbjct: 51  NGEVAVNKCEGSCKSQVQPSVITPTGFLKECYC 83


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 423 IYVLLLRCMDELTAHLV 373
           +++L L C+D  T HL+
Sbjct: 191 MHLLFLLCLDYFTLHLL 207


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 152 TCHCDSGYLFNSEGKCV 202
           TCHC  GY     G+ V
Sbjct: 84  TCHCPYGYTGKDCGEYV 100


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +2

Query: 299 LETLELISQGAFYVVNGXG 355
           LET+  ++    Y +NG G
Sbjct: 254 LETVSALNGAFLYTINGQG 272


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,094
Number of Sequences: 336
Number of extensions: 1855
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)