Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0128.Seq
         (459 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0655 - 19621717-19622594,19623186-19623227,19624323-196244...    29   1.4  
09_06_0180 - 21385655-21386017,21386399-21386623,21386859-21387305     28   4.2  

>10_08_0655 -
           19621717-19622594,19623186-19623227,19624323-19624479,
           19625333-19625405,19625483-19625595
          Length = 420

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 11  SLMALAASKSLFEKSCPENAHTTLNPCVPTCADPELKHT 127
           S +AL+ SK + E + PE     L  C+     P  +HT
Sbjct: 260 STVALSVSKVMGEDAKPETVSEALTACIEETCSPAYRHT 298


>09_06_0180 - 21385655-21386017,21386399-21386623,21386859-21387305
          Length = 344

 Score = 27.9 bits (59), Expect = 4.2
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -3

Query: 211 GNGHAFSLRVEEVSRITVAGCDEXRHATGVFQFR-VCTGRHAG 86
           GNG AF  + + V R+TV           +  F  VC GRH+G
Sbjct: 123 GNGEAFGAQKDGVWRLTVKDLKIGNIEVFLVDFLIVCIGRHSG 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,000,243
Number of Sequences: 37544
Number of extensions: 194990
Number of successful extensions: 360
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 360
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 907440304
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)