Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0128.Seq
(459 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein. 44 3e-04
AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA 1... 40 0.003
D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein pr... 39 0.007
AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein. 36 0.051
AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein. 36 0.088
AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein. 35 0.15
AC006950-2|AAD15624.1| 735|Homo sapiens IgG Fc binding protein ... 34 0.20
AK127639-1|BAC87067.1| 394|Homo sapiens protein ( Homo sapiens ... 33 0.47
AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein. 33 0.47
AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein. 33 0.47
AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein. 33 0.47
AF053356-1|AAC78790.1| 2379|Homo sapiens zonadhesin protein. 33 0.62
BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA seq... 31 1.9
AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA seq... 31 1.9
AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA seq... 31 1.9
AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA seq... 31 1.9
AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA seq... 31 1.9
AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA seq... 31 1.9
AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA seq... 31 1.9
AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA seq... 31 1.9
AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein. 31 1.9
AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein. 31 1.9
X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for ... 31 2.5
X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA frag... 31 2.5
M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor pro... 31 2.5
DQ926035-1|ABI50700.1| 125|Homo sapiens immunoglobulin heavy ch... 30 3.3
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot... 30 3.3
AK131425-1|BAD18572.1| 302|Homo sapiens protein ( Homo sapiens ... 30 4.4
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 29 5.8
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 29 5.8
AJ556748-1|CAD89474.1| 120|Homo sapiens immunoglobulin gamma he... 29 5.8
AJ556747-1|CAD89473.1| 121|Homo sapiens immunoglobulin gamma he... 29 5.8
AJ556746-1|CAD89472.1| 121|Homo sapiens immunoglobulin gamma he... 29 5.8
AJ245053-1|CAB44186.1| 129|Homo sapiens immunoglobulin gamma he... 29 7.7
>AF055136-1|AAC26019.1| 2155|Homo sapiens alpha-tectorin protein.
Length = 2155
Score = 43.6 bits (98), Expect = 3e-04
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = +2
Query: 53 SCPENAH--TTLNPCVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKCVP 205
+CP N+H + ++ C P CA LK + C + CHCD+GY+ N + +P
Sbjct: 1371 TCPPNSHYESCVSVCQPRCAAIRLK-SDCSHYCVEGCHCDAGYVLNGKSCILP 1422
Score = 29.9 bits (64), Expect = 4.4
Identities = 19/54 (35%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
Frame = +2
Query: 56 CPENAH-TTLNPCVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
CPEN+H C TC L CV C CD GY +CV +E
Sbjct: 984 CPENSHFEECITCTETCETLTLGPI-CVDSCSEGCQCDEGYALLG-SQCVTRSE 1035
>AC007842-1|AAD39266.1| 2843|Homo sapiens Human Fc gamma BP [AA
1-2843] protein.
Length = 2843
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +2
Query: 47 EKSCPENAHTTL--NPCVPTCADPELKHTS--CVTXFIATCHCDSGYLFNSEGKCVPV 208
E +CPEN+H + +PC +C P T C + C CD+G++ +++ +CVP+
Sbjct: 1947 EITCPENSHYEVCGSPCPASCPSPAPLTTPAVCEGPCVEGCQCDAGFVLSAD-RCVPL 2003
Score = 37.5 bits (83), Expect = 0.022
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 56 CPENAHTTLNPCVPTCA---DPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
CP+N+H L C TC+ C C CDSG+L+N + CVP+ +
Sbjct: 2733 CPQNSHYEL--CADTCSLGCSALSAPLQCPDGCAEGCQCDSGFLYNGQA-CVPIQQ 2785
Score = 36.3 bits (80), Expect = 0.051
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 56 CPENAHTTLNPCVPTCA---DPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
CP N+H L C TC+ C C CDSG+L+N + CVP+ +
Sbjct: 1532 CPPNSHYEL--CADTCSLGCSALSAPPQCQDGCAEGCQCDSGFLYNGQA-CVPIQQ 1584
>D84239-1|BAA19526.1| 5405|Homo sapiens IgG Fc binding protein
protein.
Length = 5405
Score = 39.1 bits (87), Expect = 0.007
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +2
Query: 47 EKSCPENAHTTL--NPCVPTCADPELKHTS--CVTXFIATCHCDSGYLFNSEGKCVPV 208
E +CPEN+H + PC +C P T C + C CD+G++ +++ +CVP+
Sbjct: 1947 EITCPENSHYEVCGPPCPASCPSPAPLTTPAVCEGPCVEGCQCDAGFVLSAD-RCVPL 2003
Score = 39.1 bits (87), Expect = 0.007
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +2
Query: 47 EKSCPENAHTTL--NPCVPTCADPELKHTS--CVTXFIATCHCDSGYLFNSEGKCVPV 208
E +CPEN+H + PC +C P T C + C CD+G++ +++ +CVP+
Sbjct: 3148 EITCPENSHYEVCGPPCPASCPSPAPLTTPAVCEGPCVEGCQCDAGFVLSAD-RCVPL 3204
Score = 39.1 bits (87), Expect = 0.007
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +2
Query: 47 EKSCPENAHTTL--NPCVPTCADPELKHTS--CVTXFIATCHCDSGYLFNSEGKCVPV 208
E +CPEN+H + PC +C P T C + C CD+G++ +++ +CVP+
Sbjct: 4349 EITCPENSHYEVCGPPCPASCPSPAPLTTPAVCEGPCVEGCQCDAGFVLSAD-RCVPL 4405
Score = 37.5 bits (83), Expect = 0.022
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 56 CPENAHTTLNPCVPTCA---DPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
CP+N+H L C TC+ C C CDSG+L+N + CVP+ +
Sbjct: 2733 CPQNSHYEL--CADTCSLGCSALSAPLQCPDGCAEGCQCDSGFLYNGQA-CVPIQQ 2785
Score = 37.5 bits (83), Expect = 0.022
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +2
Query: 56 CPENAHTTLNPCVPTCA---DPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
CP+N+H L C TC+ C C CDSG+L+N + CVP+ +
Sbjct: 3934 CPQNSHYEL--CADTCSLGCSALSAPLQCPDGCAEGCQCDSGFLYNGQA-CVPIQQ 3986
Score = 36.3 bits (80), Expect = 0.051
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 56 CPENAHTTLNPCVPTCA---DPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
CP N+H L C TC+ C C CDSG+L+N + CVP+ +
Sbjct: 1532 CPPNSHYEL--CADTCSLGCSALSAPPQCQDGCAEGCQCDSGFLYNGQA-CVPIQQ 1584
Score = 34.3 bits (75), Expect = 0.20
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 56 CPENAHTTL--NPCVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
CP ++H ++ C +CA T C T C CD +L S+G C+PV +
Sbjct: 5121 CPAHSHYSICTRTCQGSCAALS-GLTGCTTRCFEGCECDDRFLL-SQGVCIPVQD 5173
>AF107890-1|AAG33673.1| 1594|Homo sapiens mucin 5B protein.
Length = 1594
Score = 36.3 bits (80), Expect = 0.051
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +2
Query: 44 FEKSCPENAHTT--LNPCVPTCADPELKHTSCVTXFIAT--CHCDSGYLFNSEGKCVPVA 211
+ ++CP++ ++ C PTC +C F+ C C +G N G CVP
Sbjct: 692 YMQNCPKSQRYAYVVDACQPTCRGLSEADVTCSVSFVPVDGCTCPAGTFLNDAGACVPAQ 751
Query: 212 E 214
E
Sbjct: 752 E 752
>AJ004862-1|CAA06167.1| 1283|Homo sapiens mucin protein.
Length = 1283
Score = 35.5 bits (78), Expect = 0.088
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Frame = +2
Query: 44 FEKSCPENAHTT--LNPCVPTCADPELKHTSCVTXFIAT--CHCDSGYLFNSEGKCVPVA 211
+ ++CP++ ++ C PTC +C F+ C C +G N G CVP
Sbjct: 651 YMQNCPKSQPYAYVVDACQPTCRGLSEADVTCSVSFVPVDGCTCPAGTFLNDAGACVPAQ 710
Query: 212 E 214
E
Sbjct: 711 E 711
Score = 29.5 bits (63), Expect = 5.8
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +2
Query: 41 LFEKSCPENA-HTTL-NPCVPTCADPELKHTSCVTXFIATCHCDSGYLFN--SEGKCVPV 208
L ++CP N H +PC TC++P+ + C + C C G + + + C+P+
Sbjct: 285 LCPRTCPLNMQHQECGSPCTDTCSNPQ-RAQLCEDHCVDGCFCPPGTVLDDITHSGCLPL 343
Query: 209 AEX*I*RGG 235
+ GG
Sbjct: 344 GQCPCTHGG 352
>AF086604-1|AAC67545.1| 1321|Homo sapiens mucin protein.
Length = 1321
Score = 34.7 bits (76), Expect = 0.15
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +2
Query: 44 FEKSCPENAHTT--LNPCVPTCADPELKHTSCVTXFIAT--CHCDSGYLFNSEGKCVP 205
+ ++CP++ ++ C PTC +C F+ C C +G N G CVP
Sbjct: 690 YMQNCPKSQRYAYVVDACQPTCRGLSEADVTCSVSFVPVDGCTCPAGTFLNDAGACVP 747
Score = 29.5 bits (63), Expect = 5.8
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +2
Query: 41 LFEKSCPENAHTTL-NPCVPTCADPELKHTSCVTXFIATCHCDSGYLFN--SEGKCVPVA 211
L ++C H +PC TC++P+ + C + C C G + + + C+P+
Sbjct: 324 LCPRTCTNMQHQNCGSPCTDTCSNPQ-RAQLCKDHCVDRCFCPPGTVLDNITHSGCLPLG 382
Query: 212 EX*I*RGG 235
+ GG
Sbjct: 383 QCPCTHGG 390
>AC006950-2|AAD15624.1| 735|Homo sapiens IgG Fc binding protein [AA
4671-5405] protein.
Length = 735
Score = 34.3 bits (75), Expect = 0.20
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 56 CPENAHTTL--NPCVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
CP ++H ++ C +CA T C T C CD +L S+G C+PV +
Sbjct: 451 CPAHSHYSICTRTCQGSCAALS-GLTGCTTRCFEGCECDDRFLL-SQGVCIPVQD 503
>AK127639-1|BAC87067.1| 394|Homo sapiens protein ( Homo sapiens
cDNA FLJ45737 fis, clone JCMLC2002751, weakly similar
to Von Willebrand factor precursor. ).
Length = 394
Score = 33.1 bits (72), Expect = 0.47
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +2
Query: 89 CVPTCADPELKHTSC--VTXFIATCHCDSGYLFNSEGKCVP 205
C P C K C + +A C+C G L++ EG+CVP
Sbjct: 171 CAPACGQHCGKPEDCGELGSCVAGCNCPLGLLWDPEGQCVP 211
>AJ298317-1|CAC83674.1| 2448|Homo sapiens mucin 5 protein.
Length = 2448
Score = 33.1 bits (72), Expect = 0.47
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 53 SCPENA--HTTLNPCVPTCADPELKHTSCVTXFIAT--CHCDSGYLFNSEGKCV 202
+CP++ H ++ C PTC +C FI C C G + GKCV
Sbjct: 703 TCPKSMTYHYHVSTCQPTCRSLSEGDITCSVGFIPVDGCICPKGTFLDDTGKCV 756
>AF043909-1|AAC19168.1| 1373|Homo sapiens gastric mucin protein.
Length = 1373
Score = 33.1 bits (72), Expect = 0.47
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 53 SCPENA--HTTLNPCVPTCADPELKHTSCVTXFIAT--CHCDSGYLFNSEGKCV 202
+CP++ H ++ C PTC +C FI C C G + GKCV
Sbjct: 705 TCPKSMTYHYHVSTCQPTCRSLSEGDITCSVGFIPVDGCICPKGTFLDDTGKCV 758
>AF015521-1|AAC15950.1| 1104|Homo sapiens mucin protein.
Length = 1104
Score = 33.1 bits (72), Expect = 0.47
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Frame = +2
Query: 53 SCPENA--HTTLNPCVPTCADPELKHTSCVTXFIAT--CHCDSGYLFNSEGKCV 202
+CP++ H ++ C PTC +C FI C C G + GKCV
Sbjct: 703 TCPKSMTYHYHVSACQPTCRSLSEGDITCSVGFIPVDGCICPKGTFLDDTGKCV 756
>AF053356-1|AAC78790.1| 2379|Homo sapiens zonadhesin protein.
Length = 2379
Score = 32.7 bits (71), Expect = 0.62
Identities = 21/65 (32%), Positives = 27/65 (41%)
Frame = +2
Query: 8 VSLMALAASKSLFEKSCPENAHTTLNPCVPTCADPELKHTSCVTXFIATCHCDSGYLFNS 187
V L S+S SCP NA C +C P SC C C+ G+LF S
Sbjct: 939 VILGTTTTSRSSTGMSCPPNARYESCACPASCKSP---RPSCGPLCREGCVCNPGFLF-S 994
Query: 188 EGKCV 202
+ C+
Sbjct: 995 DNHCI 999
>BX928748-1|CAH74051.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone RP11-465I11 on chromosome 1 Contains part of
the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 11 SLMALAASKSLFEKSCPENAHTTLNPCV--PTCADPELKHTSCVTXFIA-TCHCDSGYLF 181
S +L+ ++ K+CPE + + + CV C + + C F + C C GY
Sbjct: 5404 SRTSLSRTRRTIRKTCPEGSEASHDTCVDIDECENTDACQHECKNTFGSYQCICPPGYQL 5463
Query: 182 NSEGK-CVPVAE 214
GK C + E
Sbjct: 5464 THNGKTCQDIDE 5475
>AL391824-1|CAI17865.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-268N14 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 11 SLMALAASKSLFEKSCPENAHTTLNPCV--PTCADPELKHTSCVTXFIA-TCHCDSGYLF 181
S +L+ ++ K+CPE + + + CV C + + C F + C C GY
Sbjct: 5404 SRTSLSRTRRTIRKTCPEGSEASHDTCVDIDECENTDACQHECKNTFGSYQCICPPGYQL 5463
Query: 182 NSEGK-CVPVAE 214
GK C + E
Sbjct: 5464 THNGKTCQDIDE 5475
>AL135797-1|CAI17871.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-77J13 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 11 SLMALAASKSLFEKSCPENAHTTLNPCV--PTCADPELKHTSCVTXFIA-TCHCDSGYLF 181
S +L+ ++ K+CPE + + + CV C + + C F + C C GY
Sbjct: 5404 SRTSLSRTRRTIRKTCPEGSEASHDTCVDIDECENTDACQHECKNTFGSYQCICPPGYQL 5463
Query: 182 NSEGK-CVPVAE 214
GK C + E
Sbjct: 5464 THNGKTCQDIDE 5475
>AL135796-1|CAI17854.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-164L12 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 11 SLMALAASKSLFEKSCPENAHTTLNPCV--PTCADPELKHTSCVTXFIA-TCHCDSGYLF 181
S +L+ ++ K+CPE + + + CV C + + C F + C C GY
Sbjct: 5404 SRTSLSRTRRTIRKTCPEGSEASHDTCVDIDECENTDACQHECKNTFGSYQCICPPGYQL 5463
Query: 182 NSEGK-CVPVAE 214
GK C + E
Sbjct: 5464 THNGKTCQDIDE 5475
>AL133553-2|CAI17858.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-174L6 on chromosome 1 Contains the3' end
of the gene for hemicentin, the PRG4 gene for
proteoglycan 4 ).
Length = 5635
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 11 SLMALAASKSLFEKSCPENAHTTLNPCV--PTCADPELKHTSCVTXFIA-TCHCDSGYLF 181
S +L+ ++ K+CPE + + + CV C + + C F + C C GY
Sbjct: 5404 SRTSLSRTRRTIRKTCPEGSEASHDTCVDIDECENTDACQHECKNTFGSYQCICPPGYQL 5463
Query: 182 NSEGK-CVPVAE 214
GK C + E
Sbjct: 5464 THNGKTCQDIDE 5475
>AL133515-1|CAI17853.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-153O3 on chromosome 1 Contains part of
the gene for hemicentin. ).
Length = 5635
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 11 SLMALAASKSLFEKSCPENAHTTLNPCV--PTCADPELKHTSCVTXFIA-TCHCDSGYLF 181
S +L+ ++ K+CPE + + + CV C + + C F + C C GY
Sbjct: 5404 SRTSLSRTRRTIRKTCPEGSEASHDTCVDIDECENTDACQHECKNTFGSYQCICPPGYQL 5463
Query: 182 NSEGK-CVPVAE 214
GK C + E
Sbjct: 5464 THNGKTCQDIDE 5475
>AL121996-1|CAI17844.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-118G19 on chromosome 1q25.1-31.1 Contains
the 5' end of the gene for hemicentin. ).
Length = 5635
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 11 SLMALAASKSLFEKSCPENAHTTLNPCV--PTCADPELKHTSCVTXFIA-TCHCDSGYLF 181
S +L+ ++ K+CPE + + + CV C + + C F + C C GY
Sbjct: 5404 SRTSLSRTRRTIRKTCPEGSEASHDTCVDIDECENTDACQHECKNTFGSYQCICPPGYQL 5463
Query: 182 NSEGK-CVPVAE 214
GK C + E
Sbjct: 5464 THNGKTCQDIDE 5475
>AL118512-1|CAI17864.1| 5635|Homo sapiens protein ( Human DNA sequence
from clone GS1-248A21 on chromosome 1q31.1-31.3 Contains
part of the gene for hemicentin (FIBL-6). ).
Length = 5635
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 11 SLMALAASKSLFEKSCPENAHTTLNPCV--PTCADPELKHTSCVTXFIA-TCHCDSGYLF 181
S +L+ ++ K+CPE + + + CV C + + C F + C C GY
Sbjct: 5404 SRTSLSRTRRTIRKTCPEGSEASHDTCVDIDECENTDACQHECKNTFGSYQCICPPGYQL 5463
Query: 182 NSEGK-CVPVAE 214
GK C + E
Sbjct: 5464 THNGKTCQDIDE 5475
>AJ306906-1|CAC37630.1| 2673|Homo sapiens fibulin-6 protein.
Length = 2673
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 11 SLMALAASKSLFEKSCPENAHTTLNPCV--PTCADPELKHTSCVTXFIA-TCHCDSGYLF 181
S +L+ ++ K+CPE + + + CV C + + C F + C C GY
Sbjct: 2442 SRTSLSRTRRTIRKTCPEGSEASHDTCVDIDECENTDACQHECKNTFGSYQCICPPGYQL 2501
Query: 182 NSEGK-CVPVAE 214
GK C + E
Sbjct: 2502 THNGKTCQDIDE 2513
>AF156100-1|AAK68690.1| 5636|Homo sapiens hemicentin protein.
Length = 5636
Score = 31.1 bits (67), Expect = 1.9
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 4/72 (5%)
Frame = +2
Query: 11 SLMALAASKSLFEKSCPENAHTTLNPCV--PTCADPELKHTSCVTXFIA-TCHCDSGYLF 181
S +L+ ++ K+CPE + + + CV C + + C F + C C GY
Sbjct: 5405 SRTSLSRTRRTIRKTCPEGSEASHDTCVDIDECENTDACQHECKNTFGSYQCICPPGYQL 5464
Query: 182 NSEGK-CVPVAE 214
GK C + E
Sbjct: 5465 THNGKTCQDIDE 5476
>X04385-1|CAA27972.1| 2813|Homo sapiens protein ( Human mRNA for
pre-pro-von Willebrand factor. ).
Length = 2813
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +2
Query: 86 PCVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
PC TC C + C C G + G CVP A+
Sbjct: 664 PCNLTCRSLSYPDEECNEACLEGCFCPPGLYMDERGDCVPKAQ 706
>X04146-1|CAA27765.1| 1400|Homo sapiens protein ( Human mRNA
fragment (5'terminus) for von Willebrand factor (vWF).
).
Length = 1400
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +2
Query: 86 PCVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
PC TC C + C C G + G CVP A+
Sbjct: 664 PCNLTCRSLSYPDEECNEACLEGCFCPPGLYMDERGDCVPKAQ 706
>M25865-1|AAB59458.1| 2813|Homo sapiens von Willebrand factor
protein.
Length = 2813
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +2
Query: 86 PCVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
PC TC C + C C G + G CVP A+
Sbjct: 664 PCNLTCRSLSYPDEECNEACLEGCFCPPGLYMDERGDCVPKAQ 706
>DQ926035-1|ABI50700.1| 125|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 125
Score = 30.3 bits (65), Expect = 3.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 113 PGLHRSARRGSMSCEHFQDTISRTSSYW 30
PGL R + S+SC F D+IS S +W
Sbjct: 9 PGLVRPSETLSLSCXVFDDSISSNSYFW 36
>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein
protein.
Length = 1569
Score = 30.3 bits (65), Expect = 3.3
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = +2
Query: 50 KSCPENAHTTLNP-CVPTCADPELKHTSCV-TXFIATCHCDSGYLFNSEGKCVPVAE 214
KSC +++ C PTC +CV T C C G N+ G+CVP E
Sbjct: 770 KSCSQSSENKFGAACAPTC-QMLATGVACVPTKCEPGCVCAEGLYENAYGQCVPPEE 825
>AK131425-1|BAD18572.1| 302|Homo sapiens protein ( Homo sapiens
cDNA FLJ16545 fis, clone OCBBF3004972. ).
Length = 302
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 5 LVSLMALAASKSLFEKSCPENAHTTLNPCVPTCADPELKHTSCVTXFIATC 157
L SL++ + + CP++ HT L+ C L+H+SC++ +A C
Sbjct: 40 LESLLSEGRLDTSVQTPCPQHPHTQLS-----CEPQPLEHSSCLSTCLAGC 85
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 29.5 bits (63), Expect = 5.8
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +2
Query: 53 SCPENAHTTLN--PCVPTCADPELKHTSCVTXF--IATCHCDSGYLFNSEGKCVPVAE 214
SCP + N C TC + C+ F + C C + +G+CVP+A+
Sbjct: 35 SCPNSQVFLYNLTTCQQTCRSLSEADSHCLEGFAPVDGCGCPDHTFLDEKGRCVPLAK 92
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 29.5 bits (63), Expect = 5.8
Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 4/58 (6%)
Frame = +2
Query: 53 SCPENAHTTLN--PCVPTCADPELKHTSCVTXF--IATCHCDSGYLFNSEGKCVPVAE 214
SCP + N C TC + C+ F + C C + +G+CVP+A+
Sbjct: 660 SCPNSQVFLYNLTTCQQTCRSLSEADSHCLEGFAPVDGCGCPDHTFLDEKGRCVPLAK 717
>AJ556748-1|CAD89474.1| 120|Homo sapiens immunoglobulin gamma heavy
chain variable region protein.
Length = 120
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 113 PGLHRSARRGSMSCEHFQDTISRTSSYWL 27
PGL + ++ S+SC D+ISR+ YW+
Sbjct: 9 PGLVKPSQTLSLSCSVSGDSISRSDLYWI 37
>AJ556747-1|CAD89473.1| 121|Homo sapiens immunoglobulin gamma heavy
chain variable region protein.
Length = 121
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 113 PGLHRSARRGSMSCEHFQDTISRTSSYWL 27
PGL + ++ S+SC D+ISR+ YW+
Sbjct: 9 PGLVKPSQTLSLSCSVSGDSISRSDLYWI 37
>AJ556746-1|CAD89472.1| 121|Homo sapiens immunoglobulin gamma heavy
chain variable region protein.
Length = 121
Score = 29.5 bits (63), Expect = 5.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2
Query: 113 PGLHRSARRGSMSCEHFQDTISRTSSYWL 27
PGL + ++ S+SC D+ISR+ YW+
Sbjct: 9 PGLVKPSQTLSLSCSVSGDSISRSDLYWI 37
>AJ245053-1|CAB44186.1| 129|Homo sapiens immunoglobulin gamma heavy
chain variable region protein.
Length = 129
Score = 29.1 bits (62), Expect = 7.7
Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
Frame = -2
Query: 113 PGLHRSARRGSMSCEHFQDTISRTSSY--WLREPS 15
PGL + ++ S++C D+ISR S Y W+R+P+
Sbjct: 9 PGLVKPSQTLSLTCTVSGDSISRGSYYWNWIRQPA 43
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,632,309
Number of Sequences: 237096
Number of extensions: 1084554
Number of successful extensions: 4094
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 3854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4085
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -