Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0128.Seq
(459 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical p... 38 0.003
U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of s... 37 0.006
Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical pr... 34 0.043
Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical pr... 34 0.043
Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical pr... 34 0.057
Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical pr... 34 0.057
U50311-11|AAN84861.1| 86|Caenorhabditis elegans Inhibitor of s... 31 0.30
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 30 0.70
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 30 0.70
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 30 0.70
Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr... 29 1.2
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 1.2
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 1.2
U29377-10|AAA68717.1| 140|Caenorhabditis elegans Hypothetical p... 29 2.1
Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical pr... 27 6.6
U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc... 27 6.6
U50311-9|AAA92313.1| 137|Caenorhabditis elegans Hypothetical pr... 27 6.6
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 27 8.7
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 27 8.7
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 27 8.7
L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell m... 27 8.7
L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell m... 27 8.7
L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell m... 27 8.7
AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical ... 27 8.7
AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical ... 27 8.7
AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical ... 27 8.7
AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical ... 27 8.7
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 27 8.7
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 27 8.7
AF016668-4|AAO12440.1| 222|Caenorhabditis elegans Hypothetical ... 27 8.7
AC024797-2|AAF60705.3| 339|Caenorhabditis elegans Hypothetical ... 27 8.7
>Z98877-16|CAH60800.1| 975|Caenorhabditis elegans Hypothetical
protein Y69H2.10b protein.
Length = 975
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +2
Query: 56 CPENAHTT--LNPCVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKC 199
CP+N T LNPC LK T C C C GYL +S+G+C
Sbjct: 740 CPKNQTMTDCLNPCSEDKCPGILKKTECTNRCGQGCACAYGYLRSSDGEC 789
Score = 29.5 bits (63), Expect = 1.2
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 10/60 (16%)
Frame = +2
Query: 53 SCPENAHTTLN--------PCVPTCADPELKHTSCVTXFIAT--CHCDSGYLFNSEGKCV 202
SCP++ HT + C+P C C T C C S Y +S G CV
Sbjct: 851 SCPDHDHTNITCLETQEYTDCLPKCQKQCSGAPKCEAGSACTPGCFCRSNYKLDSNGDCV 910
>U50311-10|AAA92314.1| 135|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform a
protein.
Length = 135
Score = 37.1 bits (82), Expect = 0.006
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 50 KSCPENAHTTL--NPCVPTCA-DPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
K+C N N C P C P+ C+ + TC C G++ NS GKCV V+E
Sbjct: 18 KTCEANEELVSCHNTCEPQCGYTPKACTEQCI---MNTCDCKDGFVRNSLGKCVEVSE 72
>Z98877-5|CAD56616.1| 731|Caenorhabditis elegans Hypothetical
protein Y69H2.3c protein.
Length = 731
Score = 34.3 bits (75), Expect = 0.043
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +2
Query: 8 VSLMALAASKSLFEKSCPENAHTTLNPCVPTCADPEL----KHTSCVTXFIATCHCDSGY 175
VS++ L ++ +C +N T++ C+ TC++ + K C C C SGY
Sbjct: 477 VSIVHLNSTTPAPGSTCAKNQ--TMSDCLNTCSEDKCPGMSKSMMCTKHCGQGCACASGY 534
Query: 176 LFNSEGKC 199
L +S+G+C
Sbjct: 535 LRSSDGEC 542
Score = 33.9 bits (74), Expect = 0.057
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 53 SCPEN--AHTTLNPCVPT-CADPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
+CP N ++ NPC C +C+ C C G++ N++G CV AE
Sbjct: 98 TCPVNEVSNECHNPCTEKKCPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAE 154
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Frame = +2
Query: 56 CPENAHTTLNPCVPTCADPE-----LKHTSCVTXFIATCHCDSGYLFNSEGKCVPVA 211
C +N C TC +PE K+ SC C C G++ GKCV +A
Sbjct: 552 CGQNEEYRCEKCAGTCKNPEPNCPGPKNKSCK----RACICAPGFV-KKNGKCVTLA 603
>Z98877-4|CAB54473.2| 796|Caenorhabditis elegans Hypothetical
protein Y69H2.3b protein.
Length = 796
Score = 34.3 bits (75), Expect = 0.043
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +2
Query: 8 VSLMALAASKSLFEKSCPENAHTTLNPCVPTCADPEL----KHTSCVTXFIATCHCDSGY 175
VS++ L ++ +C +N T++ C+ TC++ + K C C C SGY
Sbjct: 542 VSIVHLNSTTPAPGSTCAKNQ--TMSDCLNTCSEDKCPGMSKSMMCTKHCGQGCACASGY 599
Query: 176 LFNSEGKC 199
L +S+G+C
Sbjct: 600 LRSSDGEC 607
Score = 33.9 bits (74), Expect = 0.057
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 53 SCPEN--AHTTLNPCVPT-CADPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
+CP N ++ NPC C +C+ C C G++ N++G CV AE
Sbjct: 98 TCPVNEVSNECHNPCTEKKCPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAE 154
Score = 27.1 bits (57), Expect = 6.6
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 131 CVTXFIATCHCDSGYLFNSEGKCVPVAE 214
C+ C C G + N +G+CV +AE
Sbjct: 256 CMMRCEKACSCKKGLVRNRQGQCVKLAE 283
Score = 27.1 bits (57), Expect = 6.6
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
Frame = +2
Query: 56 CPENAHTTLNPCVPTCADPE-----LKHTSCVTXFIATCHCDSGYLFNSEGKCVPVA 211
C +N C TC +PE K+ SC C C G++ GKCV +A
Sbjct: 617 CGQNEEYRCEKCAGTCKNPEPNCPGPKNKSCK----RACICAPGFV-KKNGKCVTLA 668
>Z98877-6|CAD56617.1| 432|Caenorhabditis elegans Hypothetical
protein Y69H2.3d protein.
Length = 432
Score = 33.9 bits (74), Expect = 0.057
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 53 SCPEN--AHTTLNPCVPT-CADPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
+CP N ++ NPC C +C+ C C G++ N++G CV AE
Sbjct: 98 TCPVNEVSNECHNPCTEKKCPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAE 154
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Frame = +2
Query: 26 AASKSLFEKSCPENAHTTLNPCVPTCADPELKHTSCVTXFIAT---CHCDSGYLFNSEGK 196
A K + C N PC C+D + + T C C G+ ++ GK
Sbjct: 360 APIKKPINRRCRSNEK--FEPCKTVCSDTKCNEEPRFCPQVCTGGGCVCQEGFFRDNSGK 417
Query: 197 CV 202
CV
Sbjct: 418 CV 419
>Z98877-3|CAB54472.2| 537|Caenorhabditis elegans Hypothetical
protein Y69H2.3a protein.
Length = 537
Score = 33.9 bits (74), Expect = 0.057
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = +2
Query: 53 SCPEN--AHTTLNPCVPT-CADPELKHTSCVTXFIATCHCDSGYLFNSEGKCVPVAE 214
+CP N ++ NPC C +C+ C C G++ N++G CV AE
Sbjct: 98 TCPVNEVSNECHNPCTEKKCPQKNAPQVNCLMACQVGCSCMDGFVRNNQGVCVKEAE 154
Score = 27.9 bits (59), Expect = 3.8
Identities = 16/62 (25%), Positives = 23/62 (37%), Gaps = 3/62 (4%)
Frame = +2
Query: 26 AASKSLFEKSCPENAHTTLNPCVPTCADPELKHTSCVTXFIAT---CHCDSGYLFNSEGK 196
A K + C N PC C+D + + T C C G+ ++ GK
Sbjct: 465 APIKKPINRRCRSNEK--FEPCKTVCSDTKCNEEPRFCPQVCTGGGCVCQEGFFRDNSGK 522
Query: 197 CV 202
CV
Sbjct: 523 CV 524
>U50311-11|AAN84861.1| 86|Caenorhabditis elegans Inhibitor of
serine protease likeprotein protein 2, isoform b
protein.
Length = 86
Score = 31.5 bits (68), Expect = 0.30
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 152 TCHCDSGYLFNSEGKCVPVAE 214
TC C G++ NS GKCV V+E
Sbjct: 3 TCDCKDGFVRNSLGKCVEVSE 23
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 30.3 bits (65), Expect = 0.70
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 56 CPENAHTTLNPCVPTCADPELKHTSCVTX--FIATCHCDSGYLFNSEGKCVPVAE 214
C + L+P + C +L+ + C + F TC C SGY N G+C+ + E
Sbjct: 149 CRKVCGERLSPQI-ACDHCDLRTSFCKSNSKFNYTCECRSGYEKNQYGECIDIDE 202
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.3 bits (65), Expect = 0.70
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 56 CPENAHTTLNPCVPTCADPELKHTSCVTX--FIATCHCDSGYLFNSEGKCVPVAE 214
C + L+P + C +L+ + C + F TC C SGY N G+C+ + E
Sbjct: 149 CRKVCGERLSPQI-ACDHCDLRTSFCKSNSKFNYTCECRSGYEKNQYGECIDIDE 202
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 30.3 bits (65), Expect = 0.70
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 56 CPENAHTTLNPCVPTCADPELKHTSCVTX--FIATCHCDSGYLFNSEGKCVPVAE 214
C + L+P + C +L+ + C + F TC C SGY N G+C+ + E
Sbjct: 149 CRKVCGERLSPQI-ACDHCDLRTSFCKSNSKFNYTCECRSGYEKNQYGECIDIDE 202
>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
protein C09F9.2 protein.
Length = 1642
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Frame = +2
Query: 77 TLNPCVPTC-AD--PELKHTSCVTXFIATCHCDSGYLFNSEGKCV 202
TLN C C AD + C A C C GY N +G+CV
Sbjct: 499 TLNECGRVCEADCFSIFTRSECTDCGSAACACLQGYARNPQGQCV 543
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.5 bits (63), Expect = 1.2
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +2
Query: 89 CVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKC 199
C +C+ +L C+T + +C C Y G+C
Sbjct: 379 CYQSCSTAQLVQMPCLTQSVNSCSCQQNYSPCGNGQC 415
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.5 bits (63), Expect = 1.2
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +2
Query: 89 CVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKC 199
C +C+ +L C+T + +C C Y G+C
Sbjct: 380 CYQSCSTAQLVQMPCLTQSVNSCSCQQNYSPCGNGQC 416
>U29377-10|AAA68717.1| 140|Caenorhabditis elegans Hypothetical
protein K05F1.10 protein.
Length = 140
Score = 28.7 bits (61), Expect = 2.1
Identities = 14/52 (26%), Positives = 23/52 (44%)
Frame = +2
Query: 47 EKSCPENAHTTLNPCVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKCV 202
E+ C +P P C + L H C + C C+ GY+ + +G C+
Sbjct: 65 ERHCDRTCENLFSP--PHCLN-HLHHAKC---YFPRCVCNDGYVRSEKGICI 110
>Z83228-9|CAB05737.2| 539|Caenorhabditis elegans Hypothetical
protein F52F12.6 protein.
Length = 539
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 211 GNGHAFSLRVEEVSRITVAGCDEXRHATGVF 119
G G+++S+R E GCD H TG++
Sbjct: 250 GTGYSWSIRREGKLACPTPGCDGSGHQTGLY 280
>U67079-1|AAB40716.1| 539|Caenorhabditis elegans C2-HC type zinc
finger proteinC.e-MyT1 protein.
Length = 539
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 211 GNGHAFSLRVEEVSRITVAGCDEXRHATGVF 119
G G+++S+R E GCD H TG++
Sbjct: 250 GTGYSWSIRREGKLACPTPGCDGSGHQTGLY 280
>U50311-9|AAA92313.1| 137|Caenorhabditis elegans Hypothetical
protein C25E10.8 protein.
Length = 137
Score = 27.1 bits (57), Expect = 6.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 155 CHCDSGYLFNSEGKCVPVA 211
C C G++ NS GKCV ++
Sbjct: 55 CDCKKGFVRNSLGKCVDIS 73
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 89 CVPTCADPELK-HTSCVTXFIATCHCDSGYLFNSEGKCVP 205
C PTC P + C +C C G+++++ +C+P
Sbjct: 42 CPPTCESPNPQCRVDCTRP---SCTCLPGHVYSNSRQCIP 78
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 53 SCPENAHTTLNPCVPTCADPELKHTSCVTXFIATCHCDSG--YLFNSEGKCVPVAE 214
+CP + C PTC + ++++T C D+G ++ + CV AE
Sbjct: 642 ACPNPEYQNEEDCCPTCPEQKVENTKNEKGDTIVCTDDAGTAHIVDDCTSCVCSAE 697
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 53 SCPENAHTTLNPCVPTCADPELKHTSCVTXFIATCHCDSG--YLFNSEGKCVPVAE 214
+CP + C PTC + ++++T C D+G ++ + CV AE
Sbjct: 576 ACPNPEYQNEEDCCPTCPEQKVENTKNEKGDTIVCTDDAGTAHIVDDCTSCVCSAE 631
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 53 SCPENAHTTLNPCVPTCADPELKHTSCVTXFIATCHCDSG--YLFNSEGKCVPVAE 214
+CP + C PTC + ++++T C D+G ++ + CV AE
Sbjct: 642 ACPNPEYQNEEDCCPTCPEQKVENTKNEKGDTIVCTDDAGTAHIVDDCTSCVCSAE 697
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 53 SCPENAHTTLNPCVPTCADPELKHTSCVTXFIATCHCDSG--YLFNSEGKCVPVAE 214
+CP + C PTC + ++++T C D+G ++ + CV AE
Sbjct: 576 ACPNPEYQNEEDCCPTCPEQKVENTKNEKGDTIVCTDDAGTAHIVDDCTSCVCSAE 631
>L10986-3|AAA28018.1| 650|Caenorhabditis elegans Abnormal cell
migration protein10, isoform b protein.
Length = 650
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 332 FYVVNGXGLQXLFNTKWAVSSSI-HLSNKTYIQXLK 436
F+V +G LQ L + +W V+ ++ L+ K +I ++
Sbjct: 198 FFVEDGEALQLLIDERWTVADTLKQLAEKNHIALME 233
>L10986-2|AAK84523.2| 667|Caenorhabditis elegans Abnormal cell
migration protein10, isoform a protein.
Length = 667
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 332 FYVVNGXGLQXLFNTKWAVSSSI-HLSNKTYIQXLK 436
F+V +G LQ L + +W V+ ++ L+ K +I ++
Sbjct: 215 FFVEDGEALQLLIDERWTVADTLKQLAEKNHIALME 250
>L10986-1|AAR25648.1| 779|Caenorhabditis elegans Abnormal cell
migration protein10, isoform c protein.
Length = 779
Score = 26.6 bits (56), Expect = 8.7
Identities = 11/36 (30%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 332 FYVVNGXGLQXLFNTKWAVSSSI-HLSNKTYIQXLK 436
F+V +G LQ L + +W V+ ++ L+ K +I ++
Sbjct: 327 FFVEDGEALQLLIDERWTVADTLKQLAEKNHIALME 362
>AL117193-5|CAB54985.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.6 protein.
Length = 335
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = +2
Query: 89 CVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKC 199
C +C+ + C+T + +C C Y G+C
Sbjct: 295 CYQSCSTAQPVQMPCLTQSVNSCSCQQNYSPCGNGQC 331
>AL117193-4|CAB54984.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.5 protein.
Length = 335
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = +2
Query: 89 CVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKC 199
C +C+ + C+T + +C C Y G+C
Sbjct: 295 CYQSCSTAQPVQMPCLTQSVNSCSCQQNYSPCGNGQC 331
>AL117193-3|CAB54983.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.4 protein.
Length = 335
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = +2
Query: 89 CVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKC 199
C +C+ + C+T + +C C Y G+C
Sbjct: 295 CYQSCSTAQPVQMPCLTQSVNSCSCQQNYSPCGNGQC 331
>AL117193-2|CAB54982.1| 335|Caenorhabditis elegans Hypothetical
protein Y105C5A.3 protein.
Length = 335
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/37 (24%), Positives = 16/37 (43%)
Frame = +2
Query: 89 CVPTCADPELKHTSCVTXFIATCHCDSGYLFNSEGKC 199
C +C+ + C+T + +C C Y G+C
Sbjct: 295 CYQSCSTAQPVQMPCLTQSVNSCSCQQNYSPCGNGQC 331
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 53 SCPENAHTTLNPCVPTCADPELKHTSCVTXFIATCHCDSG--YLFNSEGKCVPVAE 214
+CP + C PTC + ++++T C D+G ++ + CV AE
Sbjct: 576 ACPNPEYQNEEDCCPTCPEQKVENTKNEKGDTIVCTDDAGTAHIVDDCTSCVCSAE 631
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = +2
Query: 53 SCPENAHTTLNPCVPTCADPELKHTSCVTXFIATCHCDSG--YLFNSEGKCVPVAE 214
+CP + C PTC + ++++T C D+G ++ + CV AE
Sbjct: 576 ACPNPEYQNEEDCCPTCPEQKVENTKNEKGDTIVCTDDAGTAHIVDDCTSCVCSAE 631
>AF016668-4|AAO12440.1| 222|Caenorhabditis elegans Hypothetical
protein F36H9.4 protein.
Length = 222
Score = 26.6 bits (56), Expect = 8.7
Identities = 17/71 (23%), Positives = 27/71 (38%), Gaps = 2/71 (2%)
Frame = +2
Query: 2 LLVSLMALAASKSLFEKSCPENAHTTL--NPCVPTCADPELKHTSCVTXFIATCHCDSGY 175
+ +S+ L AS K C N C CA+ + + + + C C G+
Sbjct: 6 ICLSIFILFASVLAAPKKCGPNEDFKECGTACEANCAEGHVMFCT-MQCIVNVCQCKDGF 64
Query: 176 LFNSEGKCVPV 208
N + KC V
Sbjct: 65 FRNKDKKCAHV 75
>AC024797-2|AAF60705.3| 339|Caenorhabditis elegans Hypothetical
protein Y48G8AR.2 protein.
Length = 339
Score = 26.6 bits (56), Expect = 8.7
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +2
Query: 149 ATCHCDSGYLFNSEGKC 199
+TC C GY+ NS KC
Sbjct: 98 STCQCTLGYILNSGTKC 114
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,472,327
Number of Sequences: 27780
Number of extensions: 174485
Number of successful extensions: 519
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 462
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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