Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0124.Seq
(548 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 167 7e-42
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 167 7e-42
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 166 9e-42
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 166 1e-41
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 165 3e-41
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 161 3e-40
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 161 4e-40
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 159 1e-39
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 149 1e-36
12_02_1282 + 27528159-27529148,27529549-27529614 89 2e-18
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 76 2e-14
03_06_0192 + 32230953-32231030,32231130-32231485,32232250-322324... 71 8e-13
01_01_1170 - 9318332-9318461,9318551-9318613,9318694-9318744,931... 69 3e-12
08_01_0194 - 1603702-1603782,1603970-1604062,1604203-1604328,160... 62 2e-10
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 62 3e-10
02_04_0473 + 23197294-23197340,23197443-23197680,23197792-231980... 60 1e-09
08_02_0441 - 17196352-17196536,17196780-17196906,17198018-171981... 52 2e-07
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 46 3e-05
11_03_0057 + 9375083-9375088,9375904-9376031,9376107-9376166,937... 29 1.8
06_01_0602 - 4342333-4342790,4342899-4345623 29 3.2
07_01_1009 + 8557908-8558097,8558193-8558470 28 5.6
05_01_0311 + 2452230-2452232,2452401-2452809,2454136-2454263,245... 28 5.6
02_05_1356 + 35894170-35894397,35894475-35894663,35894768-35895319 28 5.6
08_02_0238 + 14665813-14668798,14669088-14669125 27 7.5
06_02_0200 - 12946139-12946282,12947636-12947842,12949506-129496... 27 7.5
12_01_0748 - 6728221-6728305,6728788-6728842,6729202-6729289,672... 27 9.9
08_01_0150 - 1179147-1179899,1180025-1180579 27 9.9
02_05_1066 + 33852402-33852815,33852936-33853019,33853203-338534... 27 9.9
01_01_0296 + 2433842-2434173,2434738-2434921 27 9.9
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 167 bits (405), Expect = 7e-42
Identities = 77/85 (90%), Positives = 81/85 (95%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 329
DIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILA
Sbjct: 287 DIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 346
Query: 328 SLSTFQQMWISKQEYDESGPSIVHR 254
SLSTFQQMWISK EYDESGPSIVHR
Sbjct: 347 SLSTFQQMWISKGEYDESGPSIVHR 371
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 546 HETTYNSIMKCDV 508
HETTYNSIMKCDV
Sbjct: 274 HETTYNSIMKCDV 286
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 167 bits (405), Expect = 7e-42
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 329
DIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILA
Sbjct: 290 DIRKDLYGNVVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 328 SLSTFQQMWISKQEYDESGPSIVHR 254
SLSTFQQMWISK EYDESGP+IVHR
Sbjct: 350 SLSTFQQMWISKDEYDESGPAIVHR 374
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 546 HETTYNSIMKCDV 508
HETTYNSIMKCDV
Sbjct: 277 HETTYNSIMKCDV 289
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 166 bits (404), Expect = 9e-42
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 329
DIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 328 SLSTFQQMWISKQEYDESGPSIVHR 254
SLSTFQQMWISK EYDESGP+IVHR
Sbjct: 350 SLSTFQQMWISKDEYDESGPAIVHR 374
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 546 HETTYNSIMKCDV 508
HETTYNSIMKCDV
Sbjct: 277 HETTYNSIMKCDV 289
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 166 bits (403), Expect = 1e-41
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 329
DIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 328 SLSTFQQMWISKQEYDESGPSIVHR 254
SLSTFQQMWI+K EYDESGPSIVHR
Sbjct: 350 SLSTFQQMWIAKAEYDESGPSIVHR 374
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 546 HETTYNSIMKCDV 508
HETTYNSIMKCDV
Sbjct: 277 HETTYNSIMKCDV 289
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 165 bits (400), Expect = 3e-41
Identities = 75/85 (88%), Positives = 81/85 (95%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 329
DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILA
Sbjct: 293 DIRKDLYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 352
Query: 328 SLSTFQQMWISKQEYDESGPSIVHR 254
SLSTFQQMWISK EYDESGP+IVHR
Sbjct: 353 SLSTFQQMWISKAEYDESGPAIVHR 377
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 546 HETTYNSIMKCDV 508
HETTYNSIMKCDV
Sbjct: 280 HETTYNSIMKCDV 292
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 161 bits (392), Expect = 3e-40
Identities = 73/85 (85%), Positives = 81/85 (95%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 329
DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 328 SLSTFQQMWISKQEYDESGPSIVHR 254
SLSTFQQMWIS+ EY+ESGP+IVHR
Sbjct: 350 SLSTFQQMWISRAEYEESGPAIVHR 374
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 546 HETTYNSIMKCDV 508
HETTYNSIMKCDV
Sbjct: 277 HETTYNSIMKCDV 289
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 161 bits (390), Expect = 4e-40
Identities = 73/84 (86%), Positives = 79/84 (94%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 329
DIRKDLY N VLSGG+TM+PGIADRM KEIT+LAPS+MK+K+IAPPERKYSVWIGGSILA
Sbjct: 289 DIRKDLYGNVVLSGGSTMFPGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILA 348
Query: 328 SLSTFQQMWISKQEYDESGPSIVH 257
SLSTFQQMWISK EYDESGP IVH
Sbjct: 349 SLSTFQQMWISKGEYDESGPGIVH 372
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 546 HETTYNSIMKCDV 508
HE TYNSIMKCDV
Sbjct: 276 HEATYNSIMKCDV 288
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 159 bits (386), Expect = 1e-39
Identities = 72/84 (85%), Positives = 77/84 (91%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 329
DIRKDLY N VLSGG+TM+PGI DRM KEITALAP +MKIK++APPERKYSVWIGGSILA
Sbjct: 289 DIRKDLYGNVVLSGGSTMFPGIGDRMSKEITALAPGSMKIKVVAPPERKYSVWIGGSILA 348
Query: 328 SLSTFQQMWISKQEYDESGPSIVH 257
SLSTFQQMWISK EYDESGP IVH
Sbjct: 349 SLSTFQQMWISKAEYDESGPGIVH 372
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -3
Query: 546 HETTYNSIMKCDV 508
HE TYNSIMKCDV
Sbjct: 276 HEATYNSIMKCDV 288
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 149 bits (361), Expect = 1e-36
Identities = 75/99 (75%), Positives = 81/99 (81%), Gaps = 14/99 (14%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 329
DIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILA
Sbjct: 290 DIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILA 349
Query: 328 SLSTFQ--------------QMWISKQEYDESGPSIVHR 254
SLSTFQ QMWISK EYDESGP+IVHR
Sbjct: 350 SLSTFQQVNLTPTLYEVARMQMWISKGEYDESGPAIVHR 388
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 546 HETTYNSIMKCDV 508
HETTYNSIMKCDV
Sbjct: 277 HETTYNSIMKCDV 289
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 89.4 bits (212), Expect = 2e-18
Identities = 52/85 (61%), Positives = 55/85 (64%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILA 329
DIRKDLY N VLSGGTTM+PGIADRM KEITALAPS+MKIK
Sbjct: 290 DIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIK------------------- 330
Query: 328 SLSTFQQMWISKQEYDESGPSIVHR 254
MWI+K EYDESGPSIVHR
Sbjct: 331 -------MWIAKAEYDESGPSIVHR 348
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3
Query: 546 HETTYNSIMKCDV 508
HETTYNSIMKCDV
Sbjct: 277 HETTYNSIMKCDV 289
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 76.2 bits (179), Expect = 2e-14
Identities = 35/77 (45%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGS 338
DIRK+L ++ +LSGG++ + +R++KE+ + ++K++A ER++SVWIGGS
Sbjct: 393 DIRKELLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGGS 452
Query: 337 ILASLSTFQQMWISKQE 287
ILASL +FQQMW SK +
Sbjct: 453 ILASLGSFQQMWFSKAD 469
>03_06_0192 +
32230953-32231030,32231130-32231485,32232250-32232425,
32233857-32234038,32234260-32234443,32235192-32235259,
32235343-32235495
Length = 398
Score = 70.5 bits (165), Expect = 8e-13
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Frame = -2
Query: 517 VRRDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE------RKYS 356
V + + L NT+L GGT G DR Q+E L+ S + ++ PPE +YS
Sbjct: 303 VTPEYHRQLLENTMLCGGTASMTGFEDRFQREAN-LSASAICPSLVKPPEYMPENLARYS 361
Query: 355 VWIGGSILASLSTFQQMWISKQEYDESGPSIVHR 254
W+GG+ILA + Q ++K +YDE+GPSIVH+
Sbjct: 362 AWLGGAILAKVVFPQNQHVTKGDYDETGPSIVHK 395
>01_01_1170 -
9318332-9318461,9318551-9318613,9318694-9318744,
9318837-9318921,9319005-9319068,9319139-9319340,
9319808-9320502
Length = 429
Score = 68.5 bits (160), Expect = 3e-12
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = -2
Query: 493 LYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 314
L+ +L+GG+T++P +R++KE+ L P ++KIIA + W GGS+LA F
Sbjct: 346 LFERIILTGGSTLFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDF 405
Query: 313 QQMWISKQEYDESG 272
+ M I+K EY+E G
Sbjct: 406 ESMCITKSEYEEMG 419
>08_01_0194 -
1603702-1603782,1603970-1604062,1604203-1604328,
1604403-1604513,1604989-1605108,1605665-1605757,
1606024-1606157,1606503-1606530,1606821-1607075,
1607167-1607401,1608147-1608193
Length = 440
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 14/100 (14%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAP--------------STMKIKIIAPP 371
D R+DLY N VLSGG+TM+ R+Q +I + +++ ++A P
Sbjct: 334 DTRRDLYKNIVLSGGSTMFKDFHKRLQNDIKKIVDERVAATNARHHVEVKPVEVNVVAHP 393
Query: 370 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRS 251
+ Y+ W GGS+ AS F + +K+EY+E G SI S
Sbjct: 394 IQSYAAWFGGSVAASNPEFYESCHTKEEYEEHGASICRTS 433
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 62.1 bits (144), Expect = 3e-10
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 7/85 (8%)
Frame = -2
Query: 490 YANTVLSGGTTMYPGIADRMQKEITALAPSTMK--IKIIAPPERKYSVWIGGSILASLST 317
Y VLSGG++ PG+++R++KE+ L P+ + I++I PP S W G +++++ST
Sbjct: 398 YKTVVLSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVST 457
Query: 316 FQQMW-ISKQEYDE----SGPSIVH 257
F + W I K+++ + +GPS V+
Sbjct: 458 FTEAWCIKKKQFRQKTRRNGPSFVN 482
>02_04_0473 +
23197294-23197340,23197443-23197680,23197792-23198016,
23198616-23198762,23198827-23198961,23199415-23199507,
23199925-23200044,23200303-23200413,23200486-23200611,
23200731-23200829,23201024-23201104
Length = 473
Score = 60.1 bits (139), Expect = 1e-09
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 16/98 (16%)
Frame = -2
Query: 508 DIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTM----------------KIKIIA 377
D R+ LY N VLSGG+TM+ R+Q+++ + + + ++ +++
Sbjct: 365 DTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVS 424
Query: 376 PPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSI 263
P ++Y+VW GGS+LAS + F + +K EY+E G SI
Sbjct: 425 HPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 462
>08_02_0441 -
17196352-17196536,17196780-17196906,17198018-17198101,
17198282-17198348,17198575-17198633,17199211-17199336,
17199406-17199474,17199545-17199653,17199692-17199760,
17199876-17199979,17200518-17200567,17200696-17200774,
17200867-17200938,17201083-17201217,17201311-17201421,
17202088-17202129
Length = 495
Score = 52.4 bits (120), Expect = 2e-07
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 11/77 (14%)
Frame = -2
Query: 520 EVRRDIRKDLYANTVLSGGTTMYPGIADRMQKEI------TALAPS-----TMKIKIIAP 374
E+ D R LY + VLSGG+TMYPG+ R++KE+ L + ++++I P
Sbjct: 314 EMDIDNRMTLYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDP 373
Query: 373 PERKYSVWIGGSILASL 323
P RK+ V++GG++LA +
Sbjct: 374 PRRKHMVYLGGAVLAGI 390
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/88 (22%), Positives = 43/88 (48%)
Frame = -2
Query: 505 IRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 326
+++ L + +++GG ++ PG+ R++ I P +K++ + W G + A+
Sbjct: 618 VKERLCQSILVTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAA 677
Query: 325 LSTFQQMWISKQEYDESGPSIVHRSASK 242
S F + S +Y E G ++ HR +
Sbjct: 678 SSKFGRHTFSLADYREHGENLFHRKLKR 705
>11_03_0057 +
9375083-9375088,9375904-9376031,9376107-9376166,
9376832-9376892,9377434-9377583,9377667-9377822,
9377905-9378116,9378572-9378673,9378785-9378924,
9379781-9379932
Length = 388
Score = 29.5 bits (63), Expect = 1.8
Identities = 22/73 (30%), Positives = 32/73 (43%)
Frame = -2
Query: 544 RDHIQLHHEVRRDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPER 365
RD ++ H + R+ Y S G MYP D +K+ L K APPER
Sbjct: 232 RDILEYHPNMLRE-----YLEGTESAGF-MYPSAVDHFKKQFAYLEEHYAKGSTAAPPER 285
Query: 364 KYSVWIGGSILAS 326
+++ S+L S
Sbjct: 286 QHNSLPRPSVLYS 298
>06_01_0602 - 4342333-4342790,4342899-4345623
Length = 1060
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/28 (57%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 341 STDPYGVLPLWGSNDLNLHCRW-GESCD 421
S DP G L WGS LN+ C W G SCD
Sbjct: 43 SNDPNGALANWGS--LNV-CNWTGVSCD 67
>07_01_1009 + 8557908-8558097,8558193-8558470
Length = 155
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -3
Query: 363 STPYGSVDRSSPPSLPSNRCGSRNRSTTSLVPPLYTEVLL 244
S+ GSV R PP L + R NR L+P L+ V+L
Sbjct: 3 SSVAGSVTRRPPPVLLACRSRPNNRRLIRLLPLLFAVVVL 42
>05_01_0311 +
2452230-2452232,2452401-2452809,2454136-2454263,
2455287-2455436,2455526-2455681,2455775-2455986,
2456306-2456407,2456517-2456653,2456769-2457055
Length = 527
Score = 27.9 bits (59), Expect = 5.6
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -2
Query: 457 MYPGIADRMQKEITALAPSTMKIKIIAPPERKYS 356
MYP D +K+ L K APPER+++
Sbjct: 350 MYPSAVDHFKKQFAYLEEHYAKGSTAAPPERQHN 383
>02_05_1356 + 35894170-35894397,35894475-35894663,35894768-35895319
Length = 322
Score = 27.9 bits (59), Expect = 5.6
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 339 RSSPPSLPSNRCGSRNRSTTSLVPPLYTEVLLSVETL--SYDALQQNLKRVAQITL 178
RS PP+ + GS T+S Y +LLS L S +AL + K AQ+TL
Sbjct: 230 RSCPPNNTARSAGSSLDPTSSAFDNFYYRMLLSGRGLLSSDEALLTHPKTRAQVTL 285
>08_02_0238 + 14665813-14668798,14669088-14669125
Length = 1007
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = +2
Query: 341 STDPYGVLPLWGSNDLNLHCRW-GESC 418
S DP G L W ND CRW G +C
Sbjct: 62 SNDPGGFLGSWKQNDSIGFCRWPGVTC 88
>06_02_0200 - 12946139-12946282,12947636-12947842,12949506-12949629,
12950167-12950369,12950922-12951620,12951723-12951784,
12952395-12952404,12954905-12957631
Length = 1391
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 345 VDRSSPPSLPSNRCGSRNRSTTSLVPPL 262
+D S PP LPS GS N + T L+ L
Sbjct: 1241 LDASGPPGLPSLLDGSSNTTATILITAL 1268
>12_01_0748 -
6728221-6728305,6728788-6728842,6729202-6729289,
6729681-6729818,6729978-6730142,6730235-6730354,
6730555-6730631,6730738-6731113,6731523-6732617
Length = 732
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 308 LLEGREGGEDRSTDPYGVLPLWGSNDLNLHCRWG 409
+L+ E S P +LPL NDL+ RWG
Sbjct: 402 VLDAIEKQNYESPPPVSILPLGTGNDLSRVMRWG 435
>08_01_0150 - 1179147-1179899,1180025-1180579
Length = 435
Score = 27.1 bits (57), Expect = 9.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 451 GTWWYHRTIR 480
GTWWYH ++R
Sbjct: 315 GTWWYHHSVR 324
>02_05_1066 +
33852402-33852815,33852936-33853019,33853203-33853454,
33853643-33853708,33854784-33854849,33854935-33855003,
33855829-33856165,33856438-33856541
Length = 463
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +2
Query: 227 LKVSTLRSTSVYNGGTRLVVLLFRDPHLLEGREGGEDRSTDPYGVLPL 370
L S LR + GG + ++L D H G G+D S G LPL
Sbjct: 71 LLASRLRQHQIDGGGDKPIMLQLSDLHRHHGLAAGDD-SGGAAGFLPL 117
>01_01_0296 + 2433842-2434173,2434738-2434921
Length = 171
Score = 27.1 bits (57), Expect = 9.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 318 PSNRCGSRNRSTTSLVPPLYTEVLLSVETLSYDALQQ 208
P+ R G+ + + VPPL V+LSV L + L++
Sbjct: 80 PAARRGTGKKLLYAAVPPLLAAVVLSVAALLWQLLEE 116
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,924,917
Number of Sequences: 37544
Number of extensions: 313697
Number of successful extensions: 893
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1233951264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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