Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0123.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.76 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.0  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   5.4  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   5.4  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   5.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.4  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.4  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   9.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   9.4  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -3

Query: 471 TGKSTEVNPKSIKSXDAAIVNLVPSKPLC 385
           TGK  +V   S K  DAA+  +VP K LC
Sbjct: 130 TGKVCDVEMVSCK--DAALRKVVPLKKLC 156


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = -1

Query: 422 QPLSTWYLPSLYV*SPS---RNSHPSVVLLSVT 333
           Q  ++W+ PS+Y  SP    R+ +PS + +S +
Sbjct: 183 QVAASWHTPSMYPLSPGAGFRSPYPSALPISTS 215


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
 Frame = -1

Query: 422 QPLSTWYLPSLYV*SPS---RNSHPSVVLLSVT 333
           Q  ++W+ PS+Y  SP    R+ +PS + +S +
Sbjct: 75  QVAASWHTPSMYPLSPGAGFRSPYPSALPISTS 107


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 209 TIFHTTAILH 180
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 209 TIFHTTAILH 180
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 209 TIFHTTAILH 180
           T++HTTA LH
Sbjct: 155 TLYHTTAYLH 164


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 454 SQPKIHQVXRCSHCQLGTFQASMCR 380
           S P  H V  CS+ Q G   A + R
Sbjct: 374 SLPGCHMVDSCSNIQTGEQFARLLR 398


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/25 (40%), Positives = 12/25 (48%)
 Frame = -2

Query: 454 SQPKIHQVXRCSHCQLGTFQASMCR 380
           S P  H V  CS+ Q G   A + R
Sbjct: 381 SLPGCHMVDSCSNIQTGEQFARLLR 405


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = -1

Query: 161 KEKRATNSFLFYIFYKACNVTLFYNLYKVIHNISET 54
           KEK     ++ Y FYK  +     + +   HN++ T
Sbjct: 421 KEKADFQYYVSYDFYKMNHPVYHKDPHYGFHNVTNT 456


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 375 FQEFPPLGRFAVRDMR 328
           +  FPP  R  +RD R
Sbjct: 81  YPRFPPYDRMDIRDRR 96


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,582
Number of Sequences: 336
Number of extensions: 2200
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)