Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0123.Seq
         (548 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011039-1|AAR30199.1|  463|Drosophila melanogaster LP10071p pro...   135   3e-32
BT001873-1|AAN71645.1|  362|Drosophila melanogaster SD08285p pro...   135   3e-32
AY089522-1|AAL90260.1|  362|Drosophila melanogaster GM14559p pro...   135   3e-32
AE013599-1358|AAM68698.1|  463|Drosophila melanogaster CG8280-PB...   135   3e-32
AE013599-1357|AAF58608.1|  463|Drosophila melanogaster CG8280-PA...   135   3e-32
X06869-1|CAA29993.1|  463|Drosophila melanogaster EF-1-alpha pro...   132   2e-31
M11744-1|AAA28526.1|  463|Drosophila melanogaster protein ( D.me...   132   2e-31
BT015202-1|AAT94431.1|  462|Drosophila melanogaster RE68984p pro...   129   2e-30
AE014297-4793|AAS65236.1|  462|Drosophila melanogaster CG1873-PD...   129   2e-30
AE014297-4792|AAS65235.1|  462|Drosophila melanogaster CG1873-PC...   129   2e-30
AE014297-4791|AAN14285.1|  462|Drosophila melanogaster CG1873-PB...   129   2e-30
AE014297-4790|AAF57185.1|  462|Drosophila melanogaster CG1873-PA...   129   2e-30
X06870-1|CAA29994.1|  462|Drosophila melanogaster EF-1-alpha pro...   125   3e-29
U88868-1|AAC24943.1|  619|Drosophila melanogaster elongation fac...    55   6e-08
AY070979-1|AAL48601.1|  619|Drosophila melanogaster RE07731p pro...    55   6e-08
AE014134-2205|AAF53194.1|  619|Drosophila melanogaster CG6382-PA...    55   6e-08
BT003766-1|AAO41445.1|  670|Drosophila melanogaster RE29053p pro...    46   3e-05
AY060736-1|AAL28284.1|  194|Drosophila melanogaster GH18819p pro...    46   3e-05
AE014296-376|AAF47584.2|  670|Drosophila melanogaster CG1898-PA ...    46   3e-05

>BT011039-1|AAR30199.1|  463|Drosophila melanogaster LP10071p
           protein.
          Length = 463

 Score =  135 bits (327), Expect = 3e-32
 Identities = 67/80 (83%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KFAEIK KVDR +GK+TE NPK IKS DAAIVNLVPSKPLCVE+FQEFPPLGR
Sbjct: 364 HTAHIACKFAEIKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGR 423

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIKAVNF
Sbjct: 424 FAVRDMRQTVAVGVIKAVNF 443



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 357 YTPVLDCHTAHIA 369


>BT001873-1|AAN71645.1|  362|Drosophila melanogaster SD08285p
           protein.
          Length = 362

 Score =  135 bits (327), Expect = 3e-32
 Identities = 67/80 (83%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KFAEIK KVDR +GK+TE NPK IKS DAAIVNLVPSKPLCVE+FQEFPPLGR
Sbjct: 263 HTAHIACKFAEIKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGR 322

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIKAVNF
Sbjct: 323 FAVRDMRQTVAVGVIKAVNF 342



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 256 YTPVLDCHTAHIA 268


>AY089522-1|AAL90260.1|  362|Drosophila melanogaster GM14559p
           protein.
          Length = 362

 Score =  135 bits (327), Expect = 3e-32
 Identities = 67/80 (83%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KFAEIK KVDR +GK+TE NPK IKS DAAIVNLVPSKPLCVE+FQEFPPLGR
Sbjct: 263 HTAHIACKFAEIKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGR 322

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIKAVNF
Sbjct: 323 FAVRDMRQTVAVGVIKAVNF 342



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 256 YTPVLDCHTAHIA 268


>AE013599-1358|AAM68698.1|  463|Drosophila melanogaster CG8280-PB,
           isoform B protein.
          Length = 463

 Score =  135 bits (327), Expect = 3e-32
 Identities = 67/80 (83%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KFAEIK KVDR +GK+TE NPK IKS DAAIVNLVPSKPLCVE+FQEFPPLGR
Sbjct: 364 HTAHIACKFAEIKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGR 423

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIKAVNF
Sbjct: 424 FAVRDMRQTVAVGVIKAVNF 443



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 357 YTPVLDCHTAHIA 369


>AE013599-1357|AAF58608.1|  463|Drosophila melanogaster CG8280-PA,
           isoform A protein.
          Length = 463

 Score =  135 bits (327), Expect = 3e-32
 Identities = 67/80 (83%), Positives = 70/80 (87%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KFAEIK KVDR +GK+TE NPK IKS DAAIVNLVPSKPLCVE+FQEFPPLGR
Sbjct: 364 HTAHIACKFAEIKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGR 423

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIKAVNF
Sbjct: 424 FAVRDMRQTVAVGVIKAVNF 443



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 357 YTPVLDCHTAHIA 369


>X06869-1|CAA29993.1|  463|Drosophila melanogaster EF-1-alpha
           protein.
          Length = 463

 Score =  132 bits (320), Expect = 2e-31
 Identities = 66/80 (82%), Positives = 69/80 (86%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KFAEI  KVDR +GK+TE NPK IKS DAAIVNLVPSKPLCVE+FQEFPPLGR
Sbjct: 364 HTAHIACKFAEILEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGR 423

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIKAVNF
Sbjct: 424 FAVRDMRQTVAVGVIKAVNF 443



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 357 YTPVLDCHTAHIA 369


>M11744-1|AAA28526.1|  463|Drosophila melanogaster protein (
           D.melanogaster 50 kDaprotein F1 gene, complete cds. ).
          Length = 463

 Score =  132 bits (320), Expect = 2e-31
 Identities = 66/80 (82%), Positives = 69/80 (86%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KFAEI  KVDR +GK+TE NPK IKS DAAIVNLVPSKPLCVE+FQEFPPLGR
Sbjct: 364 HTAHIACKFAEILEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGR 423

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIKAVNF
Sbjct: 424 FAVRDMRQTVAVGVIKAVNF 443



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 357 YTPVLDCHTAHIA 369


>BT015202-1|AAT94431.1|  462|Drosophila melanogaster RE68984p
           protein.
          Length = 462

 Score =  129 bits (312), Expect = 2e-30
 Identities = 63/80 (78%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KF+EIK K DR TGK+TE  PK+IKS DAAI+ LVPSKPLCVESFQEFPPLGR
Sbjct: 364 HTAHIACKFSEIKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGR 423

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIK+VNF
Sbjct: 424 FAVRDMRQTVAVGVIKSVNF 443



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 357 YTPVLDCHTAHIA 369


>AE014297-4793|AAS65236.1|  462|Drosophila melanogaster CG1873-PD,
           isoform D protein.
          Length = 462

 Score =  129 bits (312), Expect = 2e-30
 Identities = 63/80 (78%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KF+EIK K DR TGK+TE  PK+IKS DAAI+ LVPSKPLCVESFQEFPPLGR
Sbjct: 364 HTAHIACKFSEIKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGR 423

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIK+VNF
Sbjct: 424 FAVRDMRQTVAVGVIKSVNF 443



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 357 YTPVLDCHTAHIA 369


>AE014297-4792|AAS65235.1|  462|Drosophila melanogaster CG1873-PC,
           isoform C protein.
          Length = 462

 Score =  129 bits (312), Expect = 2e-30
 Identities = 63/80 (78%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KF+EIK K DR TGK+TE  PK+IKS DAAI+ LVPSKPLCVESFQEFPPLGR
Sbjct: 364 HTAHIACKFSEIKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGR 423

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIK+VNF
Sbjct: 424 FAVRDMRQTVAVGVIKSVNF 443



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 357 YTPVLDCHTAHIA 369


>AE014297-4791|AAN14285.1|  462|Drosophila melanogaster CG1873-PB,
           isoform B protein.
          Length = 462

 Score =  129 bits (312), Expect = 2e-30
 Identities = 63/80 (78%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KF+EIK K DR TGK+TE  PK+IKS DAAI+ LVPSKPLCVESFQEFPPLGR
Sbjct: 364 HTAHIACKFSEIKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGR 423

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIK+VNF
Sbjct: 424 FAVRDMRQTVAVGVIKSVNF 443



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 357 YTPVLDCHTAHIA 369


>AE014297-4790|AAF57185.1|  462|Drosophila melanogaster CG1873-PA,
           isoform A protein.
          Length = 462

 Score =  129 bits (312), Expect = 2e-30
 Identities = 63/80 (78%), Positives = 68/80 (85%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KF+EIK K DR TGK+TE  PK+IKS DAAI+ LVPSKPLCVESFQEFPPLGR
Sbjct: 364 HTAHIACKFSEIKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGR 423

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIK+VNF
Sbjct: 424 FAVRDMRQTVAVGVIKSVNF 443



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 357 YTPVLDCHTAHIA 369


>X06870-1|CAA29994.1|  462|Drosophila melanogaster EF-1-alpha
           protein.
          Length = 462

 Score =  125 bits (302), Expect = 3e-29
 Identities = 62/80 (77%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
 Frame = -3

Query: 525 HCPH-CLKFAEIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGR 349
           H  H   KF+EIK K DR TG +TE  PK+IKS DAAI+ LVPSKPLCVESFQEFPPLGR
Sbjct: 364 HTAHIACKFSEIKEKYDRRTGGTTEDGPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGR 423

Query: 348 FAVRDMRQTVAVGVIKAVNF 289
           FAVRDMRQTVAVGVIK+VNF
Sbjct: 424 FAVRDMRQTVAVGVIKSVNF 443



 Score = 34.3 bits (75), Expect = 0.11
 Identities = 13/13 (100%), Positives = 13/13 (100%)
 Frame = -1

Query: 548 YTPVLDCHTAHIA 510
           YTPVLDCHTAHIA
Sbjct: 357 YTPVLDCHTAHIA 369


>U88868-1|AAC24943.1|  619|Drosophila melanogaster elongation factor
           1 alpha-likefactor protein.
          Length = 619

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = -3

Query: 483 VDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-V 307
           VD+ +G  ++  P+ +K    AI+ +  S  +C+E F+ FP +GRF +RD  +T+A+G V
Sbjct: 555 VDKKSGDKSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKV 614

Query: 306 IKAV 295
           +K V
Sbjct: 615 LKVV 618


>AY070979-1|AAL48601.1|  619|Drosophila melanogaster RE07731p
           protein.
          Length = 619

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = -3

Query: 483 VDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-V 307
           VD+ +G  ++  P+ +K    AI+ +  S  +C+E F+ FP +GRF +RD  +T+A+G V
Sbjct: 555 VDKKSGDKSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKV 614

Query: 306 IKAV 295
           +K V
Sbjct: 615 LKVV 618


>AE014134-2205|AAF53194.1|  619|Drosophila melanogaster CG6382-PA
           protein.
          Length = 619

 Score = 55.2 bits (127), Expect = 6e-08
 Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
 Frame = -3

Query: 483 VDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-V 307
           VD+ +G  ++  P+ +K    AI+ +  S  +C+E F+ FP +GRF +RD  +T+A+G V
Sbjct: 555 VDKKSGDKSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKV 614

Query: 306 IKAV 295
           +K V
Sbjct: 615 LKVV 618


>BT003766-1|AAO41445.1|  670|Drosophila melanogaster RE29053p
           protein.
          Length = 670

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 18/68 (26%), Positives = 38/68 (55%)
 Frame = -3

Query: 498 EIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTV 319
           ++   + + TG+  +  P+ + +   A+V L  S+P+C+E + +F  LGR  +R    T+
Sbjct: 602 KLTASIHKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTI 661

Query: 318 AVGVIKAV 295
           A G++  +
Sbjct: 662 AAGMVTKI 669


>AY060736-1|AAL28284.1|  194|Drosophila melanogaster GH18819p
           protein.
          Length = 194

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 18/68 (26%), Positives = 38/68 (55%)
 Frame = -3

Query: 498 EIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTV 319
           ++   + + TG+  +  P+ + +   A+V L  S+P+C+E + +F  LGR  +R    T+
Sbjct: 126 KLTASIHKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTI 185

Query: 318 AVGVIKAV 295
           A G++  +
Sbjct: 186 AAGMVTKI 193


>AE014296-376|AAF47584.2|  670|Drosophila melanogaster CG1898-PA
           protein.
          Length = 670

 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 18/68 (26%), Positives = 38/68 (55%)
 Frame = -3

Query: 498 EIKXKVDRXTGKSTEVNPKSIKSXDAAIVNLVPSKPLCVESFQEFPPLGRFAVRDMRQTV 319
           ++   + + TG+  +  P+ + +   A+V L  S+P+C+E + +F  LGR  +R    T+
Sbjct: 602 KLTASIHKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTI 661

Query: 318 AVGVIKAV 295
           A G++  +
Sbjct: 662 AAGMVTKI 669


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,440,232
Number of Sequences: 53049
Number of extensions: 374723
Number of successful extensions: 892
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)