Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0121.Seq
(459 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12623| Best HMM Match : NAD_kinase (HMM E-Value=1.5e-09) 58 3e-09
SB_12504| Best HMM Match : NAD_kinase (HMM E-Value=0) 30 0.80
SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74) 29 1.4
SB_35943| Best HMM Match : MFS_1 (HMM E-Value=1.5e-05) 29 1.8
SB_56000| Best HMM Match : HSA (HMM E-Value=2.8) 29 2.4
SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42) 29 2.4
SB_59320| Best HMM Match : Exo_endo_phos (HMM E-Value=0.29) 27 7.5
SB_54673| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_53389| Best HMM Match : Exo_endo_phos (HMM E-Value=6.3e-10) 27 7.5
SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13) 27 7.5
SB_6247| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_1162| Best HMM Match : Exo_endo_phos (HMM E-Value=5.3e-08) 27 7.5
SB_51484| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0036) 27 7.5
SB_42310| Best HMM Match : RVT_1 (HMM E-Value=0) 27 7.5
SB_30214| Best HMM Match : Exo_endo_phos (HMM E-Value=6.1e-11) 27 7.5
SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0) 27 7.5
SB_9596| Best HMM Match : BAF (HMM E-Value=1.54143e-44) 27 7.5
SB_3943| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_41172| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-21) 27 9.9
SB_26933| Best HMM Match : CXC (HMM E-Value=0.0082) 27 9.9
>SB_12623| Best HMM Match : NAD_kinase (HMM E-Value=1.5e-09)
Length = 155
Score = 58.4 bits (135), Expect = 3e-09
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 291 GFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDKXKP 437
GFLT F F+ F+E V VL+GHA LTLRSRL+C++ + D N++ P
Sbjct: 15 GFLTSFRFDRFREHVTKVLDGHARLTLRSRLRCIITKYHTDSNENCKTP 63
Score = 27.1 bits (57), Expect = 7.5
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2
Query: 263 VMAFHLGSLGFSDALR 310
V+AFHLGSLGF + R
Sbjct: 6 VLAFHLGSLGFLTSFR 21
>SB_12504| Best HMM Match : NAD_kinase (HMM E-Value=0)
Length = 295
Score = 30.3 bits (65), Expect = 0.80
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 173 LTDKIDFIICLGGDRDPXGC*LTFSSNRAAVMAFHLGSLGFSDALRVQQL 322
L + D +I +GGD G + ++ V+ + GSLGF +R +L
Sbjct: 59 LGEVCDLVIVVGGDGSMLGAARALARHKVPVLGVNRGSLGFLTDIRPDEL 108
>SB_43730| Best HMM Match : Drf_FH1 (HMM E-Value=0.74)
Length = 303
Score = 29.5 bits (63), Expect = 1.4
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 143 DVPSPT*SPHTPQGVCHPKLPPRRTPPC 60
D+P PH P C P PP+ PC
Sbjct: 102 DIPCTPDKPHKPDKPCTPDKPPKPDIPC 129
>SB_35943| Best HMM Match : MFS_1 (HMM E-Value=1.5e-05)
Length = 514
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +1
Query: 10 DTGTLRSASTLARS*QKHGGVRRGGSFG*HTPCGVWGLYVGEGTSDDFQS 159
DT TL +TL K+GG+R GS G G+ G VG S++ QS
Sbjct: 235 DTATL---TTLEGQLHKYGGIRLWGSLG----WGIGGFSVGAAVSNNHQS 277
>SB_56000| Best HMM Match : HSA (HMM E-Value=2.8)
Length = 410
Score = 28.7 bits (61), Expect = 2.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 268 HHGGTIAGKSELASXRVPVTPQAYDEVDLISEIVGASSESHQTFLHRRKV 119
HHGG I +S +P+ + V + S + ++ + HRRKV
Sbjct: 263 HHGGPIGHRSHKIGPAFKKSPRHFHLVGMHSNVFTRTARLPRHLFHRRKV 312
>SB_37008| Best HMM Match : MAM (HMM E-Value=1.3999e-42)
Length = 382
Score = 28.7 bits (61), Expect = 2.4
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -2
Query: 143 DVPSPT*SPHTPQGVCHPKLPPRRTPP 63
+ P P SPH P HP +PP PP
Sbjct: 210 ETPLPPGSPHIPPAPLHPHIPP--APP 234
>SB_59320| Best HMM Match : Exo_endo_phos (HMM E-Value=0.29)
Length = 243
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 41 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 84
>SB_54673| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 337
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 44 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 87
>SB_53389| Best HMM Match : Exo_endo_phos (HMM E-Value=6.3e-10)
Length = 774
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 389 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 432
>SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13)
Length = 851
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 460 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 503
>SB_6247| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 917
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 109 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 152
>SB_1162| Best HMM Match : Exo_endo_phos (HMM E-Value=5.3e-08)
Length = 285
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 188 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 231
>SB_51484| Best HMM Match : Exo_endo_phos (HMM E-Value=0.0036)
Length = 283
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 81 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 124
>SB_42310| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 940
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 109 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 152
>SB_30214| Best HMM Match : Exo_endo_phos (HMM E-Value=6.1e-11)
Length = 509
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 401 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 444
>SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1821
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 594 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 637
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 1055 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 1098
>SB_9596| Best HMM Match : BAF (HMM E-Value=1.54143e-44)
Length = 759
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 159 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 202
>SB_3943| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1457
Score = 27.1 bits (57), Expect = 7.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 300 TPFE-FNNFQEQVMNVLEGHAALTLRSRLQCVVLRKSQDDNKDK 428
+P E FN F+E + V + + L C +L+K DNK K
Sbjct: 306 SPIEYFNRFEELIKAVDDEDKEHVILGDLNCCLLKKKVFDNKTK 349
>SB_41172| Best HMM Match : 7tm_1 (HMM E-Value=2.1e-21)
Length = 342
Score = 26.6 bits (56), Expect = 9.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 270 HSTWARWGFLTPFEFNNFQEQVMNVL 347
+S+W F+T FEFN + +VL
Sbjct: 6 NSSWEHCFFITDFEFNKLSNTITSVL 31
>SB_26933| Best HMM Match : CXC (HMM E-Value=0.0082)
Length = 842
Score = 26.6 bits (56), Expect = 9.9
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 299 DALRVQQLSGASHERFRRTRGSNFKV 376
D+LRVQ+ S E+++R RG+ KV
Sbjct: 796 DSLRVQKAETRSTEQYKRFRGATKKV 821
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,892,410
Number of Sequences: 59808
Number of extensions: 265425
Number of successful extensions: 836
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 932979724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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