BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0121.Seq
(459 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001709-1|AAH01709.1| 446|Homo sapiens FLJ13052 protein protein. 87 4e-17
AY090771-1|AAM01195.1| 446|Homo sapiens NAD kinase protein. 87 4e-17
AL031282-13|CAA20354.1| 446|Homo sapiens NAD kinase protein. 87 4e-17
AL031282-12|CAI20045.1| 206|Homo sapiens NAD kinase protein. 87 4e-17
AK023114-1|BAB14412.1| 447|Homo sapiens protein ( Homo sapiens ... 87 4e-17
AL031282-14|CAI20046.1| 591|Homo sapiens NAD kinase protein. 78 1e-14
AF250320-1|AAG44568.1| 590|Homo sapiens HT029 protein. 78 1e-14
AK128338-1|BAC87390.1| 909|Homo sapiens protein ( Homo sapiens ... 29 5.8
AB081753-1|BAC16513.1| 985|Homo sapiens RIN3 protein. 29 5.8
>BC001709-1|AAH01709.1| 446|Homo sapiens FLJ13052 protein protein.
Length = 446
Score = 86.6 bits (205), Expect = 4e-17
Identities = 45/98 (45%), Positives = 63/98 (64%)
Frame = +2
Query: 2 DAQILAPFVQLVHWLVHDKSMVVFVEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTD 181
DA +L PF +L L+ +++M+V+VE VL+D +A F +VK++ TFR DD+++
Sbjct: 115 DASLLQPFKELCTHLM-EENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISN 173
Query: 182 KIDFIICLGGDRDPXGC*LTFSSNRAAVMAFHLGSLGF 295
+IDFIICLGGD F + VMAFHLGSLGF
Sbjct: 174 QIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLGSLGF 211
Score = 65.7 bits (153), Expect = 7e-11
Identities = 35/66 (53%), Positives = 42/66 (63%)
Frame = +3
Query: 207 GVTGTLXDASSLFPAIVPP*WHSTWARWGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQ 386
G GTL ASSLF VPP GFLTPF F NFQ QV V+EG+AA+ LRSRL+
Sbjct: 182 GGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRLK 241
Query: 387 CVVLRK 404
V+++
Sbjct: 242 VRVVKE 247
>AY090771-1|AAM01195.1| 446|Homo sapiens NAD kinase protein.
Length = 446
Score = 86.6 bits (205), Expect = 4e-17
Identities = 45/98 (45%), Positives = 63/98 (64%)
Frame = +2
Query: 2 DAQILAPFVQLVHWLVHDKSMVVFVEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTD 181
DA +L PF +L L+ +++M+V+VE VL+D +A F +VK++ TFR DD+++
Sbjct: 115 DASLLQPFKELCTHLM-EENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISN 173
Query: 182 KIDFIICLGGDRDPXGC*LTFSSNRAAVMAFHLGSLGF 295
+IDFIICLGGD F + VMAFHLGSLGF
Sbjct: 174 QIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLGSLGF 211
Score = 65.7 bits (153), Expect = 7e-11
Identities = 35/66 (53%), Positives = 42/66 (63%)
Frame = +3
Query: 207 GVTGTLXDASSLFPAIVPP*WHSTWARWGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQ 386
G GTL ASSLF VPP GFLTPF F NFQ QV V+EG+AA+ LRSRL+
Sbjct: 182 GGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRLK 241
Query: 387 CVVLRK 404
V+++
Sbjct: 242 VRVVKE 247
>AL031282-13|CAA20354.1| 446|Homo sapiens NAD kinase protein.
Length = 446
Score = 86.6 bits (205), Expect = 4e-17
Identities = 45/98 (45%), Positives = 63/98 (64%)
Frame = +2
Query: 2 DAQILAPFVQLVHWLVHDKSMVVFVEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTD 181
DA +L PF +L L+ +++M+V+VE VL+D +A F +VK++ TFR DD+++
Sbjct: 115 DASLLQPFKELCTHLM-EENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISN 173
Query: 182 KIDFIICLGGDRDPXGC*LTFSSNRAAVMAFHLGSLGF 295
+IDFIICLGGD F + VMAFHLGSLGF
Sbjct: 174 QIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLGSLGF 211
Score = 65.7 bits (153), Expect = 7e-11
Identities = 35/66 (53%), Positives = 42/66 (63%)
Frame = +3
Query: 207 GVTGTLXDASSLFPAIVPP*WHSTWARWGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQ 386
G GTL ASSLF VPP GFLTPF F NFQ QV V+EG+AA+ LRSRL+
Sbjct: 182 GGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRLK 241
Query: 387 CVVLRK 404
V+++
Sbjct: 242 VRVVKE 247
>AL031282-12|CAI20045.1| 206|Homo sapiens NAD kinase protein.
Length = 206
Score = 86.6 bits (205), Expect = 4e-17
Identities = 45/98 (45%), Positives = 63/98 (64%)
Frame = +2
Query: 2 DAQILAPFVQLVHWLVHDKSMVVFVEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTD 181
DA +L PF +L L+ +++M+V+VE VL+D +A F +VK++ TFR DD+++
Sbjct: 83 DASLLQPFKELCTHLM-EENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISN 141
Query: 182 KIDFIICLGGDRDPXGC*LTFSSNRAAVMAFHLGSLGF 295
+IDFIICLGGD F + VMAFHLGSLGF
Sbjct: 142 QIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLGSLGF 179
Score = 60.1 bits (139), Expect = 4e-09
Identities = 32/57 (56%), Positives = 35/57 (61%)
Frame = +3
Query: 207 GVTGTLXDASSLFPAIVPP*WHSTWARWGFLTPFEFNNFQEQVMNVLEGHAALTLRS 377
G GTL ASSLF VPP GFLTPF F NFQ QV V+EG+AA+ LRS
Sbjct: 150 GGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRS 206
>AK023114-1|BAB14412.1| 447|Homo sapiens protein ( Homo sapiens
cDNA FLJ13052 fis, clone NT2RP3001449. ).
Length = 447
Score = 86.6 bits (205), Expect = 4e-17
Identities = 45/98 (45%), Positives = 63/98 (64%)
Frame = +2
Query: 2 DAQILAPFVQLVHWLVHDKSMVVFVEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTD 181
DA +L PF +L L+ +++M+V+VE VL+D +A F +VK++ TFR DD+++
Sbjct: 115 DASLLQPFKELCTHLM-EENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISN 173
Query: 182 KIDFIICLGGDRDPXGC*LTFSSNRAAVMAFHLGSLGF 295
+IDFIICLGGD F + VMAFHLGSLGF
Sbjct: 174 QIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLGSLGF 211
Score = 65.7 bits (153), Expect = 7e-11
Identities = 35/66 (53%), Positives = 42/66 (63%)
Frame = +3
Query: 207 GVTGTLXDASSLFPAIVPP*WHSTWARWGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQ 386
G GTL ASSLF VPP GFLTPF F NFQ QV V+EG+AA+ LRSRL+
Sbjct: 182 GGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRLK 241
Query: 387 CVVLRK 404
V+++
Sbjct: 242 VRVVKE 247
>AL031282-14|CAI20046.1| 591|Homo sapiens NAD kinase protein.
Length = 591
Score = 78.2 bits (184), Expect = 1e-14
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +2
Query: 44 LVHDKSMVVFVEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTDKIDFIICLGGDRDP 223
L ++M+V+VE VL+D +A F +VK++ TFR DD++++IDFIICLGGD
Sbjct: 273 LCFQENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIICLGGDGTL 332
Query: 224 XGC*LTFSSNRAAVMAFHLGSLGF 295
F + VMAFHLGSLGF
Sbjct: 333 LYASSLFQGSVPPVMAFHLGSLGF 356
Score = 65.7 bits (153), Expect = 7e-11
Identities = 35/66 (53%), Positives = 42/66 (63%)
Frame = +3
Query: 207 GVTGTLXDASSLFPAIVPP*WHSTWARWGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQ 386
G GTL ASSLF VPP GFLTPF F NFQ QV V+EG+AA+ LRSRL+
Sbjct: 327 GGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRLK 386
Query: 387 CVVLRK 404
V+++
Sbjct: 387 VRVVKE 392
>AF250320-1|AAG44568.1| 590|Homo sapiens HT029 protein.
Length = 590
Score = 78.2 bits (184), Expect = 1e-14
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = +2
Query: 44 LVHDKSMVVFVEAAVLDDTLLAEYGDFTSVKERLMTFRASTDDLTDKIDFIICLGGDRDP 223
L ++M+V+VE VL+D +A F +VK++ TFR DD++++IDFIICLGGD
Sbjct: 273 LCFQENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIICLGGDGTL 332
Query: 224 XGC*LTFSSNRAAVMAFHLGSLGF 295
F + VMAFHLGSLGF
Sbjct: 333 LYASSLFQGSVPPVMAFHLGSLGF 356
Score = 65.7 bits (153), Expect = 7e-11
Identities = 35/66 (53%), Positives = 42/66 (63%)
Frame = +3
Query: 207 GVTGTLXDASSLFPAIVPP*WHSTWARWGFLTPFEFNNFQEQVMNVLEGHAALTLRSRLQ 386
G GTL ASSLF VPP GFLTPF F NFQ QV V+EG+AA+ LRSRL+
Sbjct: 327 GGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFSFENFQSQVTQVIEGNAAVVLRSRLK 386
Query: 387 CVVLRK 404
V+++
Sbjct: 387 VRVVKE 392
>AK128338-1|BAC87390.1| 909|Homo sapiens protein ( Homo sapiens
cDNA FLJ46480 fis, clone THYMU3025683, weakly similar
to Ras interaction/interference protein 1. ).
Length = 909
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 164 C*L*KSSDVPSPT*SPHTPQGVCHPKLPPRRT 69
C L S VP+P +PH P HP PP T
Sbjct: 234 CPLPTSPPVPAPHVTPHAPGPPDHPNQPPMMT 265
>AB081753-1|BAC16513.1| 985|Homo sapiens RIN3 protein.
Length = 985
Score = 29.5 bits (63), Expect = 5.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -2
Query: 164 C*L*KSSDVPSPT*SPHTPQGVCHPKLPPRRT 69
C L S VP+P +PH P HP PP T
Sbjct: 309 CPLPTSPPVPAPHVTPHAPGPPDHPNQPPMMT 340
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,759,977
Number of Sequences: 237096
Number of extensions: 1279267
Number of successful extensions: 3358
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3335
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -