Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0119.Seq
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7E308 Cluster: Putative uncharacterized protein; n=2; ... 37 0.48
UniRef50_Q22T26 Cluster: Putative uncharacterized protein; n=1; ... 37 0.48
UniRef50_UPI0000E49AE4 Cluster: PREDICTED: hypothetical protein;... 36 0.84
UniRef50_Q6CS78 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 36 1.1
UniRef50_A0C0A6 Cluster: Chromosome undetermined scaffold_14, wh... 35 1.5
UniRef50_A1Z9N7 Cluster: CG8585-PE, isoform E; n=18; Pancrustace... 35 2.0
UniRef50_A5E662 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_A5K1Q9 Cluster: RNA binding protein, putative; n=5; Pla... 34 2.6
UniRef50_Q4T089 Cluster: Chromosome undetermined SCAF11289, whol... 33 6.0
UniRef50_A7LRG7 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
UniRef50_Q245R7 Cluster: TPR Domain containing protein; n=1; Tet... 33 7.9
UniRef50_A2DKP8 Cluster: Viral A-type inclusion protein, putativ... 33 7.9
UniRef50_A0DE76 Cluster: Chromosome undetermined scaffold_47, wh... 33 7.9
>UniRef50_A7E308 Cluster: Putative uncharacterized protein; n=2;
Laurasiatheria|Rep: Putative uncharacterized protein -
Bos taurus (Bovine)
Length = 273
Score = 36.7 bits (81), Expect = 0.48
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = -1
Query: 648 NDSRARSTKAEEGTCQ-KSQEETHSEQRGRTRSDGATTSNDNDKQYDSTTRTTVAPNIRK 472
+DS + + + G + K + + S+++ RT SD + + +D+D S + V + RK
Sbjct: 166 SDSSSEEKRKKAGRSKNKKKRKKKSKRKHRTYSDNSDSDSDSDTNSSSDDKRRVKKSRRK 225
Query: 471 RS*DLSNQIRLKMKILPPNP 412
R+ +L + + +++ L NP
Sbjct: 226 RNAELKSPRKRRLRRLKKNP 245
>UniRef50_Q22T26 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 386
Score = 36.7 bits (81), Expect = 0.48
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 645 DSRARSTKAEEGTCQKSQEETHSE-QRGRTRSDGATTSNDNDKQYDSTTRTTVAPN 481
D A ++ + T Q SQ+ T + Q T D TTS DND Q ST +T + N
Sbjct: 277 DQSASNSSSGASTSQNSQQSTDKDDQTTSTDKDAQTTSTDNDAQTTSTDSSTDSKN 332
>UniRef50_UPI0000E49AE4 Cluster: PREDICTED: hypothetical protein; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 4236
Score = 35.9 bits (79), Expect = 0.84
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = -1
Query: 645 DSRARSTKAEEGTCQKSQEETHSEQRGRTRSDGATTSN 532
DS A STKA GT + Q T + R + SDG TTS+
Sbjct: 3896 DSPAGSTKASSGTTRDHQATTSPQSRTTSESDGTTTSS 3933
>UniRef50_Q6CS78 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 823
Score = 35.5 bits (78), Expect = 1.1
Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 9/107 (8%)
Frame = -1
Query: 639 RARSTKA--EEGTCQKSQE--ETHSEQRGRTRSDGATTSNDNDKQYDSTTRTTVAPNIRK 472
++++TK + T +K Q+ E++S RT + +T N + Q+DS + +VAP++
Sbjct: 352 KSKTTKQLRRKSTKKKLQQDIESNSANTSRTATPLSTVQNSLNLQFDSQSNVSVAPSVTS 411
Query: 471 R---S*DLSNQIRLKMKILPPNPKSSQKLMAP--TNMKRNQVRINNK 346
+ L+ Q + PN SSQ++ +P +N N + N+
Sbjct: 412 NLNSNLALTPQENIYSTDFLPNTASSQQMDSPNFSNFNSNYFNVQNE 458
>UniRef50_A0C0A6 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 549
Score = 35.1 bits (77), Expect = 1.5
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -1
Query: 582 HSEQRGRTRSDGATTSNDN-DKQYDSTTRTTVAPNIRKRS*DLSN-QIRLKMKILPPNPK 409
++E GR +S+ N + QYD+ + + + +SN +++L++K+L PN +
Sbjct: 79 NNEVAGRVQSNLTRLINSKFELQYDNDPQAEIEEEVFLNDNQISNLKVKLRLKVLNPNEE 138
Query: 408 SSQKLMAPTNMKRNQVRIN 352
SQ+ T NQ N
Sbjct: 139 FSQRTTINTASSENQYEQN 157
>UniRef50_A1Z9N7 Cluster: CG8585-PE, isoform E; n=18;
Pancrustacea|Rep: CG8585-PE, isoform E - Drosophila
melanogaster (Fruit fly)
Length = 1327
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 301 HQCSSLLLYCSVCALLVVYANLI--PLHICWSHQFLRTFWI 417
H CSS Y +C LL++ ANLI P+ I + + L T WI
Sbjct: 747 HPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 787
>UniRef50_A5E662 Cluster: Putative uncharacterized protein; n=1;
Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
uncharacterized protein - Lodderomyces elongisporus
(Yeast) (Saccharomyces elongisporus)
Length = 554
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = -1
Query: 648 NDSRARSTKAEEGTCQKSQEETHSEQRGRTRSDGATTSNDNDKQYDSTTRTTVAPNIR 475
+D+ ++S+K++ G ++ T SDGA ++N+N +ST+ T++ I+
Sbjct: 81 DDALSKSSKSDNGNNNNKNNNDNNNNTKSTLSDGAGSNNNNSNNNNSTSSTSLLGTIK 138
>UniRef50_A5K1Q9 Cluster: RNA binding protein, putative; n=5;
Plasmodium|Rep: RNA binding protein, putative -
Plasmodium vivax
Length = 611
Score = 34.3 bits (75), Expect = 2.6
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 648 NDSRARSTKAEEGTCQKSQE-ETHSEQRGRTRSDGATTSNDNDKQYDSTTRT 496
N R RS K T +K ++ ++ S RTRS T SND+ Y+S R+
Sbjct: 487 NSRRKRSHKKHSSTTRKRKKYDSRSRSSHRTRSSHRTRSNDSISSYESDRRS 538
>UniRef50_Q4T089 Cluster: Chromosome undetermined SCAF11289, whole
genome shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome undetermined SCAF11289, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 3980
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -1
Query: 639 RARSTKAEEGTCQKSQEETHSEQRGRTRSDGATTSNDNDKQYDSTT 502
+ + KAEE C +++E+ +++ RT S G T + DSTT
Sbjct: 2255 QTETLKAEECVCDQAEEDEEAQEPPRTESKGVTARVGTELWEDSTT 2300
>UniRef50_A7LRG7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides ovatus ATCC 8483|Rep: Putative
uncharacterized protein - Bacteroides ovatus ATCC 8483
Length = 955
Score = 32.7 bits (71), Expect = 7.9
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -1
Query: 633 RSTKAEEGTCQKSQEETHSEQRGRTRSDGATTSNDNDKQYDSTTRTTVAPNIRK 472
RS K +E C+K Q+E EQ GA TS + + + P+++K
Sbjct: 266 RSLKIQEELCKKKQQEEQEEQAREKVLQGALTSQEEGLVHFKAQWEAIQPDLKK 319
>UniRef50_Q245R7 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 3061
Score = 32.7 bits (71), Expect = 7.9
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 1/88 (1%)
Frame = -1
Query: 603 QKSQEETHSEQRGRTRS-DGATTSNDNDKQYDSTTRTTVAPNIRKRS*DLSNQIRLKMKI 427
QKS ++ + T S + +T N D + T + +I K S QI M+I
Sbjct: 800 QKSLKQDFDDSPNLTNSYNKHSTFNQRDLKKKKTRNLSYFHDINK-----SIQIEKNMQI 854
Query: 426 LPPNPKSSQKLMAPTNMKRNQVRINNKK 343
+P N S + ++P N + +R NNKK
Sbjct: 855 IPKNEVSEEIQISPQNSQIKILRQNNKK 882
>UniRef50_A2DKP8 Cluster: Viral A-type inclusion protein, putative;
n=1; Trichomonas vaginalis G3|Rep: Viral A-type
inclusion protein, putative - Trichomonas vaginalis G3
Length = 1618
Score = 32.7 bits (71), Expect = 7.9
Identities = 22/96 (22%), Positives = 48/96 (50%)
Frame = -1
Query: 630 STKAEEGTCQKSQEETHSEQRGRTRSDGATTSNDNDKQYDSTTRTTVAPNIRKRS*DLSN 451
+ K +E + QKSQ +T+ + + +SD + ND +K + +++ + N K L N
Sbjct: 518 NAKIKELSDQKSQLQTNISKLEKEKSDLISKLNDVNKLVEQSSQKLQSNNNEKL--QLEN 575
Query: 450 QIRLKMKILPPNPKSSQKLMAPTNMKRNQVRINNKK 343
+++ ++ + Q+L + +NQ+ +N K
Sbjct: 576 ELKASKSLIEQSNIKEQELNQKISQIQNQLNNSNAK 611
>UniRef50_A0DE76 Cluster: Chromosome undetermined scaffold_47, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_47,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 253
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +2
Query: 104 KCIH-KLKTTQSHKVMQGLLKLMFPFVIPRSYHHGSRCRCLRNCFDYY 244
KC+ K+K ++H Q L++ ++ FVI ++Y++ ++ CF Y
Sbjct: 201 KCLEMKVKLPKNHPAQQILVQDLYSFVISKNYNNEQAVNFIKKCFREY 248
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,469,330
Number of Sequences: 1657284
Number of extensions: 8410012
Number of successful extensions: 30822
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 28503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30690
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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