Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0119.Seq
(648 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY928072-1|AAX78396.1| 1319|Drosophila melanogaster hyperpolariz... 35 0.11
AY928071-1|AAX78395.1| 627|Drosophila melanogaster hyperpolariz... 35 0.11
AY928070-1|AAX78394.1| 618|Drosophila melanogaster hyperpolariz... 35 0.11
AY928069-1|AAX78393.1| 1282|Drosophila melanogaster hyperpolariz... 35 0.11
AY060342-1|AAL25381.1| 245|Drosophila melanogaster GH23838p pro... 35 0.11
AF124300-1|AAD42059.1| 945|Drosophila melanogaster putative vol... 35 0.11
AE013599-1869|ABC66060.1| 627|Drosophila melanogaster CG8585-PD... 35 0.11
AE013599-1868|ABC66059.1| 618|Drosophila melanogaster CG8585-PC... 35 0.11
AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB... 35 0.11
AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE... 35 0.11
BT009959-1|AAQ22428.1| 1027|Drosophila melanogaster RH08828p pro... 30 3.1
AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p pro... 29 5.4
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 29 5.4
AB052636-1|BAD83601.1| 205|Drosophila melanogaster addicsin pro... 29 7.2
D17550-1|BAA04488.1| 1235|Drosophila melanogaster tyrosine kinas... 28 9.5
AE014296-868|AAF47916.2| 1233|Drosophila melanogaster CG7525-PA ... 28 9.5
AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-P... 28 9.5
>AY928072-1|AAX78396.1| 1319|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B2C2 protein.
Length = 1319
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 301 HQCSSLLLYCSVCALLVVYANLI--PLHICWSHQFLRTFWI 417
H CSS Y +C LL++ ANLI P+ I + + L T WI
Sbjct: 739 HPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 779
>AY928071-1|AAX78395.1| 627|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A3B1C1 protein.
Length = 627
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 301 HQCSSLLLYCSVCALLVVYANLI--PLHICWSHQFLRTFWI 417
H CSS Y +C LL++ ANLI P+ I + + L T WI
Sbjct: 84 HPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 124
>AY928070-1|AAX78394.1| 618|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A2B1C1 protein.
Length = 618
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 301 HQCSSLLLYCSVCALLVVYANLI--PLHICWSHQFLRTFWI 417
H CSS Y +C LL++ ANLI P+ I + + L T WI
Sbjct: 75 HPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 115
>AY928069-1|AAX78393.1| 1282|Drosophila melanogaster
hyperpolarization-activated ionchannel variant
DMIH-A1B1C1 protein.
Length = 1282
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 301 HQCSSLLLYCSVCALLVVYANLI--PLHICWSHQFLRTFWI 417
H CSS Y +C LL++ ANLI P+ I + + L T WI
Sbjct: 739 HPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 779
>AY060342-1|AAL25381.1| 245|Drosophila melanogaster GH23838p
protein.
Length = 245
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 301 HQCSSLLLYCSVCALLVVYANLI--PLHICWSHQFLRTFWI 417
H CSS Y +C LL++ ANLI P+ I + + L T WI
Sbjct: 75 HPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 115
>AF124300-1|AAD42059.1| 945|Drosophila melanogaster putative
voltage- and cyclic nucleotide-gated ion channel
protein.
Length = 945
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 301 HQCSSLLLYCSVCALLVVYANLI--PLHICWSHQFLRTFWI 417
H CSS Y +C LL++ ANLI P+ I + + L T WI
Sbjct: 397 HPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 437
>AE013599-1869|ABC66060.1| 627|Drosophila melanogaster CG8585-PD,
isoform D protein.
Length = 627
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 301 HQCSSLLLYCSVCALLVVYANLI--PLHICWSHQFLRTFWI 417
H CSS Y +C LL++ ANLI P+ I + + L T WI
Sbjct: 84 HPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 124
>AE013599-1868|ABC66059.1| 618|Drosophila melanogaster CG8585-PC,
isoform C protein.
Length = 618
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 301 HQCSSLLLYCSVCALLVVYANLI--PLHICWSHQFLRTFWI 417
H CSS Y +C LL++ ANLI P+ I + + L T WI
Sbjct: 75 HPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 115
>AE013599-1867|ABC66058.1| 1290|Drosophila melanogaster CG8585-PB,
isoform B protein.
Length = 1290
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 301 HQCSSLLLYCSVCALLVVYANLI--PLHICWSHQFLRTFWI 417
H CSS Y +C LL++ ANLI P+ I + + L T WI
Sbjct: 747 HPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 787
>AE013599-1866|ABC66057.1| 1327|Drosophila melanogaster CG8585-PE,
isoform E protein.
Length = 1327
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = +1
Query: 301 HQCSSLLLYCSVCALLVVYANLI--PLHICWSHQFLRTFWI 417
H CSS Y +C LL++ ANLI P+ I + + L T WI
Sbjct: 747 HPCSSFRFYWDLCMLLLLVANLIILPVAISFFNDDLSTRWI 787
>BT009959-1|AAQ22428.1| 1027|Drosophila melanogaster RH08828p
protein.
Length = 1027
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -1
Query: 639 RARSTKAEEGTCQKSQEETHSEQRGRTRSDGATTSNDNDKQYDSTTRTTVAPNIRK 472
R RS + GT + + ++ R DG S+++ + D TRT A N R+
Sbjct: 71 RERSRERFGGTNAADEARFYDDEEQRMEDDGEEDSDEDIEMLDYDTRTASASNSRR 126
>AY113210-1|AAM29215.1| 872|Drosophila melanogaster AT06220p
protein.
Length = 872
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = -1
Query: 555 SDGATTSNDNDKQYDSTTRTTVAPNIRKRS*DLSNQIRLKMKILPPNPKSSQKLMAPTN 379
S G S DN++ YDS R R L +Q R+ M I P N AP N
Sbjct: 423 SAGEVRSRDNNRSYDSRNRNKSVGAPTNRQPVLYDQQRVGMGIDPSNQYYPYNECAPLN 481
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/59 (33%), Positives = 24/59 (40%)
Frame = -1
Query: 555 SDGATTSNDNDKQYDSTTRTTVAPNIRKRS*DLSNQIRLKMKILPPNPKSSQKLMAPTN 379
S G S DN++ YDS R R L +Q R+ M I P N AP N
Sbjct: 423 SAGEVRSRDNNRSYDSRNRNKSVGAPTNRQPVLYDQQRVGMGIDPSNQYYPYNECAPLN 481
>AB052636-1|BAD83601.1| 205|Drosophila melanogaster addicsin
protein.
Length = 205
Score = 28.7 bits (61), Expect = 7.2
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 316 LLLYCSVCALLVVYANLIPLHICWSHQFLRTFWIRR*NFHFETNLIAQIS*PFSYVWCYC 495
LLL+ LL ++ L+P+ + + H LR I+ + TN I + P + C+C
Sbjct: 141 LLLHLLSAVLLTIFTVLLPISLTFIHASLRLRNIK----NKLTNSIESLLPPRPWAPCWC 196
Query: 496 CSC 504
C
Sbjct: 197 LKC 199
>D17550-1|BAA04488.1| 1235|Drosophila melanogaster tyrosine kinase
protein.
Length = 1235
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -1
Query: 621 AEEGTCQKSQEETHSEQRGRTRSDGATTSNDNDKQYDSTTRTTVAPNIRKRS 466
AEE T E +++ T S TT + STT TT P+ KR+
Sbjct: 501 AEEETTVGQTEALPTDESTTTTSTTTTTEKPSTTTSTSTTTTTPVPSTSKRT 552
>AE014296-868|AAF47916.2| 1233|Drosophila melanogaster CG7525-PA
protein.
Length = 1233
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = -1
Query: 621 AEEGTCQKSQEETHSEQRGRTRSDGATTSNDNDKQYDSTTRTTVAPNIRKRS 466
AEE T E +++ T S TT + STT TT P+ KR+
Sbjct: 499 AEEETTVGQTEALPTDESTTTTSTTTTTEKPSTTTSTSTTTTTPVPSTSKRT 550
>AE014134-1714|AAS64673.2| 1701|Drosophila melanogaster CG33300-PA
protein.
Length = 1701
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 636 ARSTKAEEGTCQKSQEETHSEQRGRTRSDGATTSNDNDKQYDSTTRTTVAPNIRK 472
A E T QKS +E+ +S A T+ + + ++T RTT P RK
Sbjct: 682 ATKKTTHEPTTQKSTTLRITEEPTTRKSSTAKTTREPTTKRETTERTTKEPTTRK 736
Score = 28.3 bits (60), Expect = 9.5
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = -1
Query: 636 ARSTKAEEGTCQKSQEETHSEQRGRTRSDGATTSNDNDKQYDSTTRTTVAPNIRK 472
A E T QKS +E+ +S A T+ + + ++T RTT P RK
Sbjct: 882 ATKKTTHEPTTQKSTTLRITEEPTTRKSSTAKTTREPTTKRETTERTTKEPTTRK 936
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,733,178
Number of Sequences: 53049
Number of extensions: 427896
Number of successful extensions: 1921
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1918
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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