Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0118.Seq
(648 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132; Eukar... 153 4e-36
UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69; Eukary... 139 6e-32
UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41; Eumeta... 129 7e-29
UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellu... 93 4e-18
UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga... 80 4e-14
UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6; Euryar... 80 4e-14
UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;... 79 1e-13
UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4; Thermo... 76 9e-13
UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2; Crenarchae... 69 1e-10
UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus... 60 3e-08
UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|R... 58 4e-08
UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4; Pyroba... 60 6e-08
UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole geno... 52 1e-05
UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;... 51 3e-05
UniRef50_UPI000023EAC7 Cluster: predicted protein; n=1; Gibberel... 35 2.0
UniRef50_Q5FNN4 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_Q5BCA6 Cluster: Putative uncharacterized protein; n=1; ... 33 4.5
UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein ... 33 6.0
UniRef50_Q9UPT8 Cluster: Zinc finger CCCH domain-containing prot... 33 6.0
>UniRef50_O17445 Cluster: 60S ribosomal protein L15; n=132;
Eukaryota|Rep: 60S ribosomal protein L15 - Drosophila
melanogaster (Fruit fly)
Length = 204
Score = 153 bits (371), Expect = 4e-36
Identities = 75/110 (68%), Positives = 80/110 (72%)
Frame = -1
Query: 585 PRPTRPDKARRLGLPC*TRLCCIQNPVRRGGRKRPVAKGATYGKPKSHGVNQLKPTRNLQ 406
PRPTRPDKARRLG + VRRGGRKRPV KG TYGKPKSHGVNQLKP R LQ
Sbjct: 40 PRPTRPDKARRLGYRAKQGFVIYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQ 99
Query: 405 SIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDPKIN 256
SIAEE L+SYW+AQD+SYKYFEVIL+D H AIRRDPKIN
Sbjct: 100 SIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDTHHSAIRRDPKIN 149
Score = 87.0 bits (206), Expect = 3e-16
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = -3
Query: 253 IVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 92
I VHKHRE+RGLTSAG+SSRG+GKG+RYSQT GGSRRAAW R+N + RKR
Sbjct: 151 ICKHVHKHRELRGLTSAGKSSRGIGKGYRYSQTIGGSRRAAWKRKNREHMHRKR 204
Score = 34.7 bits (76), Expect = 2.0
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = -3
Query: 646 RFLMRVRVWQNRQXTRMHR 590
R+L+R+RVWQ RQ T++HR
Sbjct: 20 RYLLRIRVWQYRQLTKLHR 38
>UniRef50_P61313 Cluster: 60S ribosomal protein L15; n=69;
Eukaryota|Rep: 60S ribosomal protein L15 - Homo sapiens
(Human)
Length = 204
Score = 139 bits (336), Expect = 6e-32
Identities = 68/107 (63%), Positives = 77/107 (71%)
Frame = -1
Query: 585 PRPTRPDKARRLGLPC*TRLCCIQNPVRRGGRKRPVAKGATYGKPKSHGVNQLKPTRNLQ 406
PRPTRPDKARRLG + VRRGGRKRPV KGATYGKP HGVNQLK R+LQ
Sbjct: 40 PRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQ 99
Query: 405 SIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDP 265
S+AEE L+SYWV +DS+YK+FEVIL+DP HKAIRR+P
Sbjct: 100 SVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNP 146
Score = 92.7 bits (220), Expect = 7e-18
Identities = 43/56 (76%), Positives = 45/56 (80%)
Frame = -3
Query: 259 QLIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 92
Q I VHKHREMRGLTSAGR SRGLGKGH++ T GGSRRAAW RRNTLQL R R
Sbjct: 149 QWITKPVHKHREMRGLTSAGRKSRGLGKGHKFHHTIGGSRRAAWRRRNTLQLHRYR 204
>UniRef50_P91374 Cluster: 60S ribosomal protein L15; n=41;
Eumetazoa|Rep: 60S ribosomal protein L15 -
Caenorhabditis elegans
Length = 204
Score = 129 bits (311), Expect = 7e-29
Identities = 60/107 (56%), Positives = 76/107 (71%)
Frame = -1
Query: 585 PRPTRPDKARRLGLPC*TRLCCIQNPVRRGGRKRPVAKGATYGKPKSHGVNQLKPTRNLQ 406
PRPTRP+KARRLG + VRRG RKRPV KG TYGKPK+HGVN+LK ++ Q
Sbjct: 40 PRPTRPEKARRLGYRAKQGFVVYRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQ 99
Query: 405 SIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDP 265
++AE L+SYWVA+DS+YK++EV+L+DP HKAIRR+P
Sbjct: 100 AVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLIDPFHKAIRRNP 146
Score = 77.8 bits (183), Expect = 2e-13
Identities = 36/56 (64%), Positives = 40/56 (71%)
Frame = -3
Query: 259 QLIVNAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 92
Q I VHKHRE RGLTSAGR SRGLGKG R+S T+GGS+ W R+NT RKR
Sbjct: 149 QWITKPVHKHREQRGLTSAGRKSRGLGKGWRFSATRGGSQAKNWKRKNTKVFHRKR 204
>UniRef50_O58706 Cluster: 50S ribosomal protein L15e; n=40; cellular
organisms|Rep: 50S ribosomal protein L15e - Pyrococcus
horikoshii
Length = 194
Score = 93.5 bits (222), Expect = 4e-18
Identities = 51/108 (47%), Positives = 62/108 (57%)
Frame = -1
Query: 582 RPTRPDKARRLGLPC*TRLCCIQNPVRRGGRKRPVAKGATYGKPKSHGVNQLKPTRNLQS 403
RPTR D+AR LG ++ VRRGGRKRP KG KP G + P ++LQ
Sbjct: 41 RPTRLDRARALGYQAKQGYIIVRVRVRRGGRKRPRWKGGR--KPSKMGQVKYSPKKSLQW 98
Query: 402 IAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDPKI 259
IAEE L+SYWV +D YK+FEVI+VDP H I+ DPKI
Sbjct: 99 IAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKI 146
>UniRef50_A3H928 Cluster: Ribosomal protein L15e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L15e -
Caldivirga maquilingensis IC-167
Length = 185
Score = 80.2 bits (189), Expect = 4e-14
Identities = 45/108 (41%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Frame = -1
Query: 582 RPTRPDKARRLGLPC*TRLCCIQNPVRRG--GRKRPVAKGATYGKPKSHGVNQLKPTRNL 409
+PTR DKAR+ G + ++ VRRG R+RP T +PK GV + + NL
Sbjct: 41 KPTRIDKARKYGYKAKQGVVVVRVRVRRGPFNRRRP----NTGRRPKRMGVYGVALSTNL 96
Query: 408 QSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDP 265
Q +AE+ L SYWV +D+ YK+FEV+++DPSH AIR DP
Sbjct: 97 QVVAEQRAARRFSNLEVLGSYWVGEDAMYKWFEVVMIDPSHPAIRNDP 144
>UniRef50_Q9HSL2 Cluster: 50S ribosomal protein L15e; n=6;
Euryarchaeota|Rep: 50S ribosomal protein L15e -
Halobacterium salinarium (Halobacterium halobium)
Length = 196
Score = 80.2 bits (189), Expect = 4e-14
Identities = 44/109 (40%), Positives = 60/109 (55%)
Frame = -1
Query: 582 RPTRPDKARRLGLPC*TRLCCIQNPVRRGGRKRPVAKGATYGKPKSHGVNQLKPTRNLQS 403
RPTR DKAR LG + ++ VR+G ++ K + K GVN++ +NLQ
Sbjct: 43 RPTRLDKARELGYKAKQGVVVVRVSVRKGTARKSRFKAGR--RTKRQGVNRIGRAKNLQR 100
Query: 402 IAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDPKIN 256
IAEE L+SYWV +D S K+FE IL+DP H AI+ D +N
Sbjct: 101 IAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLN 149
>UniRef50_UPI00015BB1DC Cluster: LSU ribosomal protein L15E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L15E - Ignicoccus hospitalis KIN4/I
Length = 245
Score = 78.6 bits (185), Expect = 1e-13
Identities = 43/108 (39%), Positives = 60/108 (55%)
Frame = -1
Query: 582 RPTRPDKARRLGLPC*TRLCCIQNPVRRGGRKRPVAKGATYGKPKSHGVNQLKPTRNLQS 403
+PTR D+AR LG + ++ VR+GG RP +PK GV P ++ +
Sbjct: 63 KPTRLDRARALGYKAKQGVVVVRVRVRKGGLNRPRPNKGR--RPKRMGVYGYAPAKSTRL 120
Query: 402 IAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDPKI 259
IAEE L+SYWVA+D Y+++EVILVDP H AI DP++
Sbjct: 121 IAEERAARKYPGLEVLNSYWVAEDGEYEWYEVILVDPHHPAICSDPEL 168
>UniRef50_Q4JB20 Cluster: 50S ribosomal protein L15e; n=4;
Thermoprotei|Rep: 50S ribosomal protein L15e -
Sulfolobus acidocaldarius
Length = 217
Score = 75.8 bits (178), Expect = 9e-13
Identities = 44/112 (39%), Positives = 59/112 (52%)
Frame = -1
Query: 594 TGXPRPTRPDKARRLGLPC*TRLCCIQNPVRRGGRKRPVAKGATYGKPKSHGVNQLKPTR 415
T RPTR ++AR LG ++ VRRGG +P +PK GV P++
Sbjct: 37 TRIDRPTRLNRARALGYKAKQGFVMVRVRVRRGGLNKPRPNSGR--RPKRMGVYGYGPSK 94
Query: 414 NLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDPKI 259
+ IAEE L SY+VA+D YKY+EVI+VD SH IR DP++
Sbjct: 95 GYRWIAEERAARKFPNLEVLGSYYVAEDGMYKYYEVIMVDYSHPVIRSDPEL 146
Score = 33.1 bits (72), Expect = 6.0
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = -3
Query: 247 NAVHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSRRAAWLRRNTLQLRRK 95
++V++ R RGLTSAG+ SRGL K KG +R ++ QL+R+
Sbjct: 151 DSVNRKRVFRGLTSAGQKSRGLTKSR---GLKGTVQRKWKKKQKERQLKRR 198
>UniRef50_A0RW64 Cluster: Ribosomal protein L15E; n=2;
Crenarchaeota|Rep: Ribosomal protein L15E - Cenarchaeum
symbiosum
Length = 152
Score = 68.5 bits (160), Expect = 1e-10
Identities = 38/112 (33%), Positives = 59/112 (52%)
Frame = -1
Query: 594 TGXPRPTRPDKARRLGLPC*TRLCCIQNPVRRGGRKRPVAKGATYGKPKSHGVNQLKPTR 415
T RPTR D+AR LG + ++ V GG +R +G +PK GV ++K
Sbjct: 34 TRIERPTRIDRARSLGYKAKQGIVVVRMRVGTGGMRRQRPRGGR--RPKHLGVTRIKADV 91
Query: 414 NLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDPKI 259
+++ +A L SY+V +D +Y +FEVIL DPSH + +DP++
Sbjct: 92 SMKQVAVRRVLERYPNMSLLGSYFVYKDGAYYWFEVILADPSHPRVAKDPEL 143
>UniRef50_A7DNS0 Cluster: Ribosomal protein L15e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L15e - Candidatus Nitrosopumilus maritimus SCM1
Length = 190
Score = 60.5 bits (140), Expect = 3e-08
Identities = 33/112 (29%), Positives = 57/112 (50%)
Frame = -1
Query: 594 TGXPRPTRPDKARRLGLPC*TRLCCIQNPVRRGGRKRPVAKGATYGKPKSHGVNQLKPTR 415
T +P+R +ARRLG + ++ V GG ++ G +PK GV ++K
Sbjct: 73 TRIDKPSRIQRARRLGYKAKQGVIVVRMRVGTGGMRKQRPTGGR--RPKHLGVTRIKADD 130
Query: 414 NLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDPKI 259
N++++AE L SY++ +D + +FEVIL DP H + +D ++
Sbjct: 131 NMKTVAERRVSERYPNMKLLGSYFIYKDGKHYWFEVILADPDHPRVAQDKEL 182
>UniRef50_A2YC64 Cluster: Ribosomal protein L15; n=6; Eukaryota|Rep:
Ribosomal protein L15 - Oryza sativa subsp. indica
(Rice)
Length = 438
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/51 (54%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = -3
Query: 241 VHKHREMRGLTSAGRSSRGL-GKGHRYSQTKGGSRRAAWLRRNTLQLRRKR 92
VHKH E+ GLTSAG RGL GKGH + + + S RA W R T+ LRR R
Sbjct: 388 VHKHGELHGLTSAGNKYRGLRGKGHTHHKARPSSPRATWKRNQTVSLRRYR 438
Score = 50.0 bits (114), Expect(2) = 4e-08
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1
Query: 510 PVRRGGRKRPVAKGATYGKPKSHGVNQLKPTRN 412
P RRGGRKRPV KG Y KPK G+ QLK RN
Sbjct: 324 PSRRGGRKRPVPKGIVYSKPKHQGITQLKFQRN 356
Score = 30.3 bits (65), Expect(2) = 4e-08
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = -1
Query: 315 FEVILVDPSHKAIRRDPKIN 256
FE+ILVD +H AIR D +IN
Sbjct: 363 FEIILVDVAHSAIRDDLRIN 382
>UniRef50_Q8ZWD8 Cluster: 50S ribosomal protein L15e; n=4;
Pyrobaculum|Rep: 50S ribosomal protein L15e -
Pyrobaculum aerophilum
Length = 191
Score = 59.7 bits (138), Expect = 6e-08
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = -1
Query: 582 RPTRPDKARRLGLPC*TRLCCIQNPVRRG--GRKRPVAKGATYGKPKSHGVNQLKPTRNL 409
RP R ++AR+LG + ++ + RG R+RP + +PK GV + ++
Sbjct: 43 RPFRLERARKLGYKAKQGVVVVRVRLMRGPFNRRRPDSGR----RPKRMGVYGITAWKSW 98
Query: 408 QSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAIRRDP 265
+ +AEE L+SYWVA D Y+YFEVIL+D + I+ DP
Sbjct: 99 RQVAEERAARKHPNLEVLNSYWVADDGIYRYFEVILIDCNLPTIKNDP 146
>UniRef50_A7PSH3 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 313
Score = 52.0 bits (119), Expect = 1e-05
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -1
Query: 456 KPKSHGVNQLKPTRNLQSIAEEXXXXXXXXXXXLSSYWVAQDSSYKYFEVILVDPSHKAI 277
+P + GV QLK RN + EE + + +DS+YKY+E+ILVD +H AI
Sbjct: 2 EPTNQGVTQLKFHRNKSLVTEERDGRKL------AGLKINEDSTYKYYEIILVDVAHSAI 55
Query: 276 RRDPKIN 256
+ DP+IN
Sbjct: 56 QNDPRIN 62
>UniRef50_UPI0000DA2AC3 Cluster: PREDICTED: hypothetical protein;
n=2; Euarchontoglires|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 172
Score = 50.8 bits (116), Expect = 3e-05
Identities = 28/81 (34%), Positives = 44/81 (54%)
Frame = +1
Query: 262 LRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXXLLSNGLKVARGLQLVDT 441
+R++++ + ++EDNL+ + I NPV Q LSN LK + +QLV+T
Sbjct: 35 VRLSSDSFMEWINEDNLKKFICEIFTNPVGIQDSQSSTMVPSSFLSNRLKASGKVQLVNT 94
Query: 442 MALGLAISGTLSNWTLAATTS 504
+ LAIS TL W + TT+
Sbjct: 95 VVNRLAISCTLRKWAFSTTTA 115
>UniRef50_UPI000023EAC7 Cluster: predicted protein; n=1; Gibberella
zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
Length = 126
Score = 34.7 bits (76), Expect = 2.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -3
Query: 538 LNKVMLYSESCATWWPQ--ASSC*GCHLWQAQEPW 440
LNK YS+ TW + + SC CH++QA +PW
Sbjct: 53 LNKCFGYSDGELTWEKRNYSGSCNNCHIFQAPDPW 87
>UniRef50_Q5FNN4 Cluster: Putative uncharacterized protein; n=1;
Gluconobacter oxydans|Rep: Putative uncharacterized
protein - Gluconobacter oxydans (Gluconobacter
suboxydans)
Length = 175
Score = 34.3 bits (75), Expect = 2.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 549 LVFGLCPALWAWXRRCIRV 605
LV G+CPALWAW C+ V
Sbjct: 97 LVLGVCPALWAWLSLCVGV 115
>UniRef50_Q5BCA6 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 586
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = -1
Query: 531 RLCCIQNPVRRGGRKRPVAKGATYGKPKSHGVNQLK 424
RL CI P RRGGR++P A A SH L+
Sbjct: 29 RLACIYLPSRRGGRRKPAALAARQVPSPSHSGTSLE 64
>UniRef50_UPI0000494D88 Cluster: PREDICTED: hypothetical protein
isoform 2; n=1; Pan troglodytes|Rep: PREDICTED:
hypothetical protein isoform 2 - Pan troglodytes
Length = 110
Score = 33.1 bits (72), Expect = 6.0
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 262 LRIATNGLV*RVHEDNLEILV*RILCNPVRAQHXXXXXXXXXXLLSNGLKVARGL 426
+RI+++ + ++EDNL + I NPVR Q LL NGLK + L
Sbjct: 56 VRISSDSFMEWINEDNLRKFLCGIFTNPVRIQDAQSPMVASSSLLCNGLKASSKL 110
>UniRef50_Q9UPT8 Cluster: Zinc finger CCCH domain-containing protein
C19orf7; n=20; Theria|Rep: Zinc finger CCCH
domain-containing protein C19orf7 - Homo sapiens (Human)
Length = 1303
Score = 33.1 bits (72), Expect = 6.0
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -3
Query: 241 VHKHREMRGLTSAGRSSRGLGKGHRYSQTKGGSR 140
++++R + +S GR SRG G+G+R ++GGSR
Sbjct: 224 LNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSR 257
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 668,836,244
Number of Sequences: 1657284
Number of extensions: 13279262
Number of successful extensions: 34732
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 33174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34700
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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