Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0116.Seq
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    24   0.85 
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    23   2.0  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   3.4  
AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    22   4.5  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   4.5  
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    22   4.5  

>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 494 SEHHFRKSQHPWRAVTQSPACRHCT 568
           S+ HFR+ Q  +      PA ++CT
Sbjct: 32  SKSHFRQGQAKFEITDLEPALQYCT 56


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 411 KRHKWSTL 388
           KRHKWSTL
Sbjct: 91  KRHKWSTL 98



 Score = 21.4 bits (43), Expect = 6.0
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 277 VTVPIEKKNLSKTFVLLLVSCWRLFL 354
           + + +E K+LS+TF   ++    LFL
Sbjct: 101 ILLKLESKDLSRTFYGFVIVAHLLFL 126


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 81  DHLTLQFDCATASQW 125
           D  TL  DC TAS W
Sbjct: 23  DFDTLYRDCTTASSW 37


>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 314 HLFCYL*VVGVYFLETGL 367
           HLFC L VV ++FL   L
Sbjct: 172 HLFCVLYVVLLHFLTYNL 189


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 6/20 (30%), Positives = 14/20 (70%)
 Frame = -2

Query: 99  IVMLGDLSVTVLVIFHESSY 40
           ++++GDL  ++ +IF +  Y
Sbjct: 167 VLLIGDLHTSIYIIFFDMFY 186


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 314 HLFCYL*VVGVYFLETGL 367
           HLFC L VV ++FL   L
Sbjct: 172 HLFCVLYVVLLHFLTYNL 189


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,595
Number of Sequences: 336
Number of extensions: 3041
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)