Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0113.Seq
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ...    49   7e-05
UniRef50_Q61343 Cluster: Beta-D-galactosidase fusion protein; n=...    44   0.003
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    40   0.059
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    39   0.078
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    39   0.078
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    39   0.078
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    38   0.18 
UniRef50_A2U9U3 Cluster: GCN5-related N-acetyltransferase; n=1; ...    36   0.55 
UniRef50_Q40538 Cluster: Nicotiana tabacum (clone 5) activating ...    35   1.3  
UniRef50_Q4T320 Cluster: Chromosome undetermined SCAF10132, whol...    34   2.9  
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    33   5.1  
UniRef50_Q0RGR9 Cluster: Putative acyl-CoA transferases/carnitin...    32   8.9  

>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
           uncultured bacterium|Rep: Non-ribosomal peptide
           synthetase - uncultured bacterium
          Length = 338

 Score = 49.2 bits (112), Expect = 7e-05
 Identities = 26/46 (56%), Positives = 27/46 (58%)
 Frame = -1

Query: 583 WVTPGFSQSXRCKNDGQ*IVIRLTIGELGTGPPLEVDGIDKLDIEF 446
           W   GF     C   G+        GELGTGPPLEVDGIDKLDIEF
Sbjct: 260 WSKTGFRPF--CLEAGRRAYYDSLYGELGTGPPLEVDGIDKLDIEF 303


>UniRef50_Q61343 Cluster: Beta-D-galactosidase fusion protein; n=1;
           Mus musculus|Rep: Beta-D-galactosidase fusion protein -
           Mus musculus (Mouse)
          Length = 121

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 19/20 (95%), Positives = 20/20 (100%)
 Frame = -2

Query: 504 NWVPGPPSRSTVSISLISNS 445
           +WVPGPPSRSTVSISLISNS
Sbjct: 18  SWVPGPPSRSTVSISLISNS 37


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 39.5 bits (88), Expect = 0.059
 Identities = 20/37 (54%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = +3

Query: 495 VPNSPIVS---RITIHWPSFLQRXDWENPGVTQLNRL 596
           VP  P+ S     ++     LQR DWENPGVTQLNRL
Sbjct: 10  VPGDPLESTCRHASLALAVVLQRRDWENPGVTQLNRL 46


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 39.1 bits (87), Expect = 0.078
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 546 LQRXDWENPGVTQLNRL 596
           LQR DWENPGVTQLNRL
Sbjct: 72  LQRRDWENPGVTQLNRL 88


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 39.1 bits (87), Expect = 0.078
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 546 LQRXDWENPGVTQLNRL 596
           LQR DWENPGVTQLNRL
Sbjct: 26  LQRRDWENPGVTQLNRL 42


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 39.1 bits (87), Expect = 0.078
 Identities = 16/17 (94%), Positives = 16/17 (94%)
 Frame = +3

Query: 546 LQRXDWENPGVTQLNRL 596
           LQR DWENPGVTQLNRL
Sbjct: 12  LQRRDWENPGVTQLNRL 28


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 37.9 bits (84), Expect = 0.18
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +1

Query: 544 FYNVXTGKTLALPNLIAL 597
           FYNV TGKTLALPNLIAL
Sbjct: 9   FYNVVTGKTLALPNLIAL 26


>UniRef50_A2U9U3 Cluster: GCN5-related N-acetyltransferase; n=1;
           Bacillus coagulans 36D1|Rep: GCN5-related
           N-acetyltransferase - Bacillus coagulans 36D1
          Length = 180

 Score = 36.3 bits (80), Expect = 0.55
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = -2

Query: 498 VPGPPSRSTVSISLISNSR 442
           VPGPPSRSTVSISL+ NS+
Sbjct: 2   VPGPPSRSTVSISLMFNSK 20


>UniRef50_Q40538 Cluster: Nicotiana tabacum (clone 5) activating
           factor DNA sequence; n=2; Eukaryota|Rep: Nicotiana
           tabacum (clone 5) activating factor DNA sequence -
           Nicotiana tabacum (Common tobacco)
          Length = 56

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 15/16 (93%), Positives = 15/16 (93%)
 Frame = -1

Query: 499 GTGPPLEVDGIDKLDI 452
           GTGPPLEV GIDKLDI
Sbjct: 22  GTGPPLEVRGIDKLDI 37


>UniRef50_Q4T320 Cluster: Chromosome undetermined SCAF10132, whole
           genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF10132,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer)
          Length = 695

 Score = 33.9 bits (74), Expect = 2.9
 Identities = 23/52 (44%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -1

Query: 511 IGELGTGPPLEVDGIDKLDIEFAAXDGGD-QR-EGGANGGDGNCSNCQKGSP 362
           +G LG  P   V G+D L        GGD QR EGG  GGDG  +  Q+G P
Sbjct: 257 VGVLGHRP---VGGLD-LGAHRVFQGGGDLQRPEGGGQGGDGGAAEAQRGGP 304


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 519 RITIHWPSFLQRXDWENPGVTQLNRL 596
           ++ +  P  L R DWENP +TQ +RL
Sbjct: 10  QVQLSLPQILSRRDWENPQITQYHRL 35


>UniRef50_Q0RGR9 Cluster: Putative acyl-CoA transferases/carnitine
           dehydratase; n=1; Frankia alni ACN14a|Rep: Putative
           acyl-CoA transferases/carnitine dehydratase - Frankia
           alni (strain ACN14a)
          Length = 790

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +2

Query: 281 ACRRGCRTTAGSCYGRTAASCRCCGCSWAAFLAVAAISISPICSTFSLVTSVXGREFDIK 460
           AC +G    A +     AA+CR  GC  AA LA AA ++ P      L+        +++
Sbjct: 642 ACAQGWVAMAATADSDVAAACRALGCGSAAQLAAAA-AVRPAGEVLDLLAGAGVAAEEVR 700

Query: 461 L 463
           L
Sbjct: 701 L 701


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,445,905
Number of Sequences: 1657284
Number of extensions: 7617043
Number of successful extensions: 24535
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24399
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)