Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0112.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    24   4.3  
Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.           23   7.5  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   7.5  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +1

Query: 343 FHWHSKR*NCYWPLIGC 393
           FHW +   +CY P+I C
Sbjct: 552 FHWLAMSHSCYNPIIYC 568


>Z22930-5|CAA80517.1|  275|Anopheles gambiae trypsin protein.
          Length = 275

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 498 QFQAVNSHRISQAVHRNLPRPLMDL 424
           Q +    HR  QA+ R LPRP  D+
Sbjct: 21  QARVALKHRSVQALPRFLPRPQYDV 45


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +1

Query: 22  NSFTVNMLMFFQYEFCVLNVIKAIVYCVLR 111
           N   V M MFF     VLN+ K ++   LR
Sbjct: 549 NQGMVWMGMFFSPGLAVLNIAKLVIILYLR 578


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 479,939
Number of Sequences: 2352
Number of extensions: 7537
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)