Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0111.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.3  
AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    23   7.5  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    23   9.9  
AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin bi...    23   9.9  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 375  D*DPAGESAKHCSYYG*C 428
            D DP+G     C+ YG C
Sbjct: 988  DCDPSGSKGSQCNQYGQC 1005


>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +3

Query: 453 RELTYPSARNWNSPL 497
           R+ TYP ARN   PL
Sbjct: 644 RDRTYPDARNMGFPL 658


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
 Frame = -3

Query: 434 LLTL-AIVRAVLRRFSGRILIAIHLF 360
           ++TL AI+RAV+R+F  RI     LF
Sbjct: 63  IITLVAIMRAVVRQFKDRIAEGEGLF 88


>AJ441131-1|CAD29630.1|  567|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 567

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = +1

Query: 373 AIRIRPENLRSTALTMASVSKFSQIEPVSSPTRPRVT 483
           AIR+R + LR+        + F+Q + ++  T P  T
Sbjct: 293 AIRVRQQELRAQKQYEKQQAAFAQTQFLAQQTTPATT 329


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 576,711
Number of Sequences: 2352
Number of extensions: 11486
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)