Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0110.Seq
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7...    25   2.6  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.9  
AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical prot...    23   7.9  

>AJ459960-1|CAD31059.1|  696|Anopheles gambiae prophenoloxidase 7
           protein.
          Length = 696

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 17/72 (23%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
 Frame = -1

Query: 456 TQSLEYTTSTTQDIISPRDEANFSVGKNEK-----IDSDEQMIGIAANLQTTEKDEVKTG 292
           T    Y   T +D+I P D     + + E+     I + ++ + +A + Q T+ D  +  
Sbjct: 296 TYPARYANMTLEDVIRPNDGLRVIISEVERQLQRIIAAIDEGVVVAPSGQRTQLDNFRGI 355

Query: 291 DKESDKIETSGI 256
           D   + +E+S I
Sbjct: 356 DILGNIVESSSI 367


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
           protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 360 NRFSHFSQLKNW 395
           N+ SHF+ LK W
Sbjct: 362 NKMSHFNSLKQW 373


>AJ438610-11|CAD27483.1|  765|Anopheles gambiae hypothetical protein
           protein.
          Length = 765

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 360 NRFSHFSQLKNW 395
           N+ SHF+ LK W
Sbjct: 363 NKMSHFNSLKQW 374


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 541,014
Number of Sequences: 2352
Number of extensions: 9524
Number of successful extensions: 42
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)