Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0110.Seq
(618 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U54628-1|AAC50670.1| 411|Homo sapiens pyruvate dehydrogenase ki... 35 0.26
U54617-1|AAC50669.1| 411|Homo sapiens pyruvate dehydrogenase ki... 35 0.26
BC040239-1|AAH40239.1| 411|Homo sapiens PDK4 protein protein. 35 0.26
AK223328-1|BAD97048.1| 411|Homo sapiens pyruvate dehydrogenase ... 35 0.26
AC002451-1|AAB67048.1| 411|Homo sapiens unknown protein. 35 0.26
AF286471-1|AAG00550.1| 316|Homo sapiens retinitis pigmentosa GT... 31 2.5
U40371-1|AAC50437.1| 634|Homo sapiens 3',5' cyclic nucleotide p... 31 4.3
BC022525-1|AAH22525.1| 634|Homo sapiens PDE1C protein protein. 31 4.3
BC022479-1|AAH22479.1| 634|Homo sapiens PDE1C protein protein. 31 4.3
AK091734-1|BAC03734.1| 769|Homo sapiens (EC 3.1.4.17). protein. 31 4.3
AC006377-1|AAS07516.1| 591|Homo sapiens unknown protein. 31 4.3
BC064391-1|AAH64391.1| 474|Homo sapiens coiled-coil domain cont... 30 7.5
BC036757-1|AAH36757.2| 474|Homo sapiens coiled-coil domain cont... 30 7.5
BC022284-1|AAH22284.1| 334|Homo sapiens Unknown (protein for IM... 30 7.5
>U54628-1|AAC50670.1| 411|Homo sapiens pyruvate dehydrogenase
kinase isoform 4 protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.26
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 262 WY*ENVKR-EDTYEVKTDDKKSNKIETSGIIENVEREETIEPELSDTLSDAVPINVVDPI 86
WY +++ + +E DD+K+ +I+ R + P ++ + + VDP+
Sbjct: 91 WYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPV 150
Query: 85 TNNHINLKPDNFWINKYAT 29
TN ++ D F++N+ +T
Sbjct: 151 TNQNLQYFLDRFYMNRIST 169
>U54617-1|AAC50669.1| 411|Homo sapiens pyruvate dehydrogenase
kinase isoform 4 protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.26
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 262 WY*ENVKR-EDTYEVKTDDKKSNKIETSGIIENVEREETIEPELSDTLSDAVPINVVDPI 86
WY +++ + +E DD+K+ +I+ R + P ++ + + VDP+
Sbjct: 91 WYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPV 150
Query: 85 TNNHINLKPDNFWINKYAT 29
TN ++ D F++N+ +T
Sbjct: 151 TNQNLQYFLDRFYMNRIST 169
>BC040239-1|AAH40239.1| 411|Homo sapiens PDK4 protein protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.26
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 262 WY*ENVKR-EDTYEVKTDDKKSNKIETSGIIENVEREETIEPELSDTLSDAVPINVVDPI 86
WY +++ + +E DD+K+ +I+ R + P ++ + + VDP+
Sbjct: 91 WYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPV 150
Query: 85 TNNHINLKPDNFWINKYAT 29
TN ++ D F++N+ +T
Sbjct: 151 TNQNLQYFLDRFYMNRIST 169
>AK223328-1|BAD97048.1| 411|Homo sapiens pyruvate dehydrogenase
kinase, isoenzyme 4 variant protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.26
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 262 WY*ENVKR-EDTYEVKTDDKKSNKIETSGIIENVEREETIEPELSDTLSDAVPINVVDPI 86
WY +++ + +E DD+K+ +I+ R + P ++ + + VDP+
Sbjct: 91 WYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPV 150
Query: 85 TNNHINLKPDNFWINKYAT 29
TN ++ D F++N+ +T
Sbjct: 151 TNQNLQYFLDRFYMNRIST 169
>AC002451-1|AAB67048.1| 411|Homo sapiens unknown protein.
Length = 411
Score = 34.7 bits (76), Expect = 0.26
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -3
Query: 262 WY*ENVKR-EDTYEVKTDDKKSNKIETSGIIENVEREETIEPELSDTLSDAVPINVVDPI 86
WY +++ + +E DD+K+ +I+ R + P ++ + + VDP+
Sbjct: 91 WYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGIIEYKDACTVDPV 150
Query: 85 TNNHINLKPDNFWINKYAT 29
TN ++ D F++N+ +T
Sbjct: 151 TNQNLQYFLDRFYMNRIST 169
>AF286471-1|AAG00550.1| 316|Homo sapiens retinitis pigmentosa
GTPase regulator protein.
Length = 316
Score = 31.5 bits (68), Expect = 2.5
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -1
Query: 432 STTQDIISPRDEANFSVGKNEKIDSDEQMIGIAANLQTTEKDEVKTGDKESDKIET 265
S QD+I + + + + E GIA Q E E +G+KE D++ET
Sbjct: 172 SCKQDVIFDSERESVEKPDSYMEGASESQQGIADGFQQPEAIEFSSGEKEDDEVET 227
>U40371-1|AAC50437.1| 634|Homo sapiens 3',5' cyclic nucleotide
phosphodiesterase protein.
Length = 634
Score = 30.7 bits (66), Expect = 4.3
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = -3
Query: 247 VKREDTYEVKTDDKKSNKIETSGIIENVEREET-----IEPELSDTLSDAVPINVVD 92
VK+ + E D K N + ++E+V +ET E ELSD SDAVP V D
Sbjct: 48 VKQLERGEASVVDLKKNLEYAATVLESVYIDETRRLLDTEDELSDIQSDAVPSEVRD 104
>BC022525-1|AAH22525.1| 634|Homo sapiens PDE1C protein protein.
Length = 634
Score = 30.7 bits (66), Expect = 4.3
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = -3
Query: 247 VKREDTYEVKTDDKKSNKIETSGIIENVEREET-----IEPELSDTLSDAVPINVVD 92
VK+ + E D K N + ++E+V +ET E ELSD SDAVP V D
Sbjct: 48 VKQLERGEASVVDLKKNLEYAATVLESVYIDETRRLLDTEDELSDIQSDAVPSEVRD 104
>BC022479-1|AAH22479.1| 634|Homo sapiens PDE1C protein protein.
Length = 634
Score = 30.7 bits (66), Expect = 4.3
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = -3
Query: 247 VKREDTYEVKTDDKKSNKIETSGIIENVEREET-----IEPELSDTLSDAVPINVVD 92
VK+ + E D K N + ++E+V +ET E ELSD SDAVP V D
Sbjct: 48 VKQLERGEASVVDLKKNLEYAATVLESVYIDETRRLLDTEDELSDIQSDAVPSEVRD 104
>AK091734-1|BAC03734.1| 769|Homo sapiens (EC 3.1.4.17). protein.
Length = 769
Score = 30.7 bits (66), Expect = 4.3
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = -3
Query: 247 VKREDTYEVKTDDKKSNKIETSGIIENVEREET-----IEPELSDTLSDAVPINVVD 92
VK+ + E D K N + ++E+V +ET E ELSD SDAVP V D
Sbjct: 108 VKQLERGEASVVDLKKNLEYAATVLESVYIDETRRLLDTEDELSDIQSDAVPSEVRD 164
>AC006377-1|AAS07516.1| 591|Homo sapiens unknown protein.
Length = 591
Score = 30.7 bits (66), Expect = 4.3
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = -3
Query: 247 VKREDTYEVKTDDKKSNKIETSGIIENVEREET-----IEPELSDTLSDAVPINVVD 92
VK+ + E D K N + ++E+V +ET E ELSD SDAVP V D
Sbjct: 5 VKQLERGEASVVDLKKNLEYAATVLESVYIDETRRLLDTEDELSDIQSDAVPSEVRD 61
>BC064391-1|AAH64391.1| 474|Homo sapiens coiled-coil domain
containing 6 protein.
Length = 474
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -2
Query: 464 SRKHNLSNIQHQRLKILFHLEMKPIFQLGKMRKSI--LMNR*SA*LLIYKQLKKTKL 300
SRK L +QH++ ++ HLE + FQ+ K+ K I L N + L +QL++ K+
Sbjct: 146 SRK--LMQLQHEKAELEQHLEQEQEFQVNKLMKKIKKLENDTISKQLTLEQLRREKI 200
>BC036757-1|AAH36757.2| 474|Homo sapiens coiled-coil domain
containing 6 protein.
Length = 474
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -2
Query: 464 SRKHNLSNIQHQRLKILFHLEMKPIFQLGKMRKSI--LMNR*SA*LLIYKQLKKTKL 300
SRK L +QH++ ++ HLE + FQ+ K+ K I L N + L +QL++ K+
Sbjct: 146 SRK--LMQLQHEKAELEQHLEQEQEFQVNKLMKKIKKLENDTISKQLTLEQLRREKI 200
>BC022284-1|AAH22284.1| 334|Homo sapiens Unknown (protein for
IMAGE:4762273) protein.
Length = 334
Score = 29.9 bits (64), Expect = 7.5
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Frame = -2
Query: 464 SRKHNLSNIQHQRLKILFHLEMKPIFQLGKMRKSI--LMNR*SA*LLIYKQLKKTKL 300
SRK L +QH++ ++ HLE + FQ+ K+ K I L N + L +QL++ K+
Sbjct: 146 SRK--LMQLQHEKAELEQHLEQEQEFQVNKLMKKIKKLENDTISKQLTLEQLRREKI 200
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,171,086
Number of Sequences: 237096
Number of extensions: 1228759
Number of successful extensions: 3273
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3273
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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