Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0109.Seq
         (568 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   4.2  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   9.7  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    21   9.7  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   9.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   9.7  
AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochr...    21   9.7  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 119 KGISRPGPVHMESGRG 166
           +GIS P   H+  GRG
Sbjct: 183 QGISAPVEAHLRKGRG 198


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +2

Query: 458 YSYWRKNRTCQAR*LDDSDSDCPYYQS 538
           Y Y+  N+         SD +CP Y +
Sbjct: 33  YEYYENNQALPPITYPPSDWNCPQYNA 59


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 87  VPKPIPIPIQSKGSTERPQP 28
           VP+P+    Q   ST+ P P
Sbjct: 393 VPQPVEEVTQKPSSTKAPAP 412


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 7/20 (35%), Positives = 10/20 (50%)
 Frame = -2

Query: 84  PKPIPIPIQSKGSTERPQPT 25
           P+P+P P      T   +PT
Sbjct: 393 PEPVPTPEPQPTQTTESEPT 412


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 8/27 (29%), Positives = 12/27 (44%)
 Frame = +2

Query: 458 YSYWRKNRTCQAR*LDDSDSDCPYYQS 538
           Y Y+  N+         SD +CP Y +
Sbjct: 24  YEYYENNQALPPITYPPSDWNCPQYNA 50


>AF264718-1|AAF75271.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q6 protein.
          Length = 125

 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 353 NVQSDETGEEEELFDVVSYQKI 288
           N+Q  +T   EE+  VV  +KI
Sbjct: 14  NLQDIQTKVREEILSVVGKEKI 35


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,321
Number of Sequences: 336
Number of extensions: 2011
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13995094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)