Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0108.Seq
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   3.4  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    24   4.5  

>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 14/49 (28%), Positives = 25/49 (51%)
 Frame = +3

Query: 267 AIQTARTKSISEAKKAFLNATVSPNAPPTKPDKRIEPTVHYAQLDIITK 413
           A + +R +S S+ K+ +     S NAP   P    EP+V+ +  +  +K
Sbjct: 347 ATRMSRGRSRSQTKR-YSQTVESTNAPSRSPGPDEEPSVYKSLAEAASK 394


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 344  PSHQTGQKDRTNSTLCTTRYYNEKRRHEKHWR 439
            PSH  G  DR N  +   R     RR E+  R
Sbjct: 1050 PSHPVGPSDR-NQVIAARRERRNARRRERRAR 1080


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,739
Number of Sequences: 2352
Number of extensions: 10764
Number of successful extensions: 15
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)