Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0106.Seq
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease pr...    24   3.6  
DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protei...    24   4.8  
DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protei...    24   4.8  
EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.       23   6.3  

>AJ276487-1|CAB90819.1|  375|Anopheles gambiae serine protease
           protein.
          Length = 375

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = -1

Query: 309 ISKDTFSHTETVHL 268
           + KD F+H++TVHL
Sbjct: 53  LRKDLFAHSDTVHL 66


>DQ230894-1|ABD94313.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
 Frame = -3

Query: 328 RHPYLADFKGHFFAHRDGSPSSTLQSTIFTTFAGNTELCVKCHLLVIELIG*ATLKC-YR 152
           +H +  + +G    H  G   S    T +   + + EL  KC++     +     KC + 
Sbjct: 206 KHGWQMEQEGAGSGHNHGGDDSDGDDTKYEIHSDDEELPFKCYVCRESFVDPIVTKCKHY 265

Query: 151 *CRTCKL 131
            C  C L
Sbjct: 266 FCERCAL 272


>DQ230893-1|ABD94311.1|  315|Anopheles gambiae zinc finger protein
           183 protein.
          Length = 315

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
 Frame = -3

Query: 328 RHPYLADFKGHFFAHRDGSPSSTLQSTIFTTFAGNTELCVKCHLLVIELIG*ATLKC-YR 152
           +H +  + +G    H  G   S    T +   + + EL  KC++     +     KC + 
Sbjct: 206 KHGWQMEQEGGGSGHNHGGDDSDGDDTKYEIHSDDEELPFKCYVCRESFVDPIVTKCKHY 265

Query: 151 *CRTCKL 131
            C  C L
Sbjct: 266 FCERCAL 272


>EF117201-1|ABL67438.1|  481|Anopheles gambiae serpin 17 protein.
          Length = 481

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = -1

Query: 591 QXSKTNYTSIITDFGQRLHHRKILIKTKIFNIFS 490
           Q S  + T IIT   Q     K+ +    FN+FS
Sbjct: 345 QLSVADVTEIITSLNQNRGTNKMHLTVPKFNVFS 378


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,738
Number of Sequences: 2352
Number of extensions: 10712
Number of successful extensions: 18
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)