Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0105.Seq
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    22   3.8  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    22   5.0  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   6.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   6.6  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   6.6  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   8.7  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   8.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.7  

>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 29  DNGVYEVSFCDYINYNRERWLCMG 100
           + G+   S+CD I+ N E   C G
Sbjct: 435 ETGLPAGSYCDVISGNAENGSCSG 458


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 26  SDNGVYEVSFCDYINYNRERWL 91
           S N +YE+ F  + N  + +WL
Sbjct: 280 SHNSLYELDFDTFRNTKKLQWL 301


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 50  SFCDYINYNRERWLCMG 100
           S+CD I+ N E   C G
Sbjct: 441 SYCDVISGNAENGSCSG 457


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 50  SFCDYINYNRERWLCMG 100
           S+CD I+ N E   C G
Sbjct: 442 SYCDVISGNAENGSCSG 458


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 172 LNLMILKLTSREITSNIPESLSRVTV 249
           ++ + L+  + E T+N PE  + VTV
Sbjct: 111 ISWIFLETVANENTTNCPEQKNTVTV 136


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +3

Query: 21  TSLIMAFTKFLFVITLITI 77
           ++LI AF+K+ FV+ ++ +
Sbjct: 181 SALIKAFSKYQFVVLVLQL 199


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/19 (36%), Positives = 15/19 (78%)
 Frame = +3

Query: 21  TSLIMAFTKFLFVITLITI 77
           ++LI AF+K+ FV+ ++ +
Sbjct: 181 SALIKAFSKYQFVVLVLQL 199


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 105 DDDLFPGFSDT 137
           D +LFPGF  T
Sbjct: 13  DSELFPGFGST 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,430
Number of Sequences: 336
Number of extensions: 2797
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)