Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0105.Seq
         (648 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    24   3.6  
AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase ...    24   4.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   6.3  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   8.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.3  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = -2

Query: 260 PW*GTVTRLRLSGIL 216
           PW  TV RLRL GIL
Sbjct: 736 PWLRTVERLRLLGIL 750


>AF045250-1|AAC02700.1|  259|Anopheles gambiae serine proteinase
           protein.
          Length = 259

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 260 VNGKTVSSGGVSELTNDGKAVEEKVMEY 343
           V G T  SGG   +T DG+ ++  V+ Y
Sbjct: 202 VTGCTADSGGPLTVTIDGEQMQIGVLSY 229


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 448  LMFFISALYSQIYRNKFFFC 507
            L F  + +  Q+Y+ KFF C
Sbjct: 995  LQFMFAVIGVQLYKGKFFSC 1014


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 349 IFVFHDLFFDGFSVICQL 296
           I VF  LF DGF +  +L
Sbjct: 925 IIVFRSLFLDGFKMYARL 942


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 349 IFVFHDLFFDGFSVICQL 296
           I VF  LF DGF +  +L
Sbjct: 926 IIVFRSLFLDGFKMYARL 943


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 560,988
Number of Sequences: 2352
Number of extensions: 11024
Number of successful extensions: 22
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)