Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0104.Seq
(469 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF592537-1|ABQ95983.1| 593|Tribolium castaneum beta-N-acetylglu... 21 4.3
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 21 5.7
AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A prot... 21 7.5
AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII pr... 21 7.5
AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A prot... 21 7.5
AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII pr... 21 7.5
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 20 9.9
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 20 9.9
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 20 9.9
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 20 9.9
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 20 9.9
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 20 9.9
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 20 9.9
>EF592537-1|ABQ95983.1| 593|Tribolium castaneum
beta-N-acetylglucosaminidase NAG2 protein.
Length = 593
Score = 21.4 bits (43), Expect = 4.3
Identities = 9/43 (20%), Positives = 21/43 (48%)
Frame = +2
Query: 149 KKSDPVVXYRETVXEESDQLCLSKSPNKHNRLFMKVSPCLMVC 277
+KSD + Y + +E +S + +++ + + C +VC
Sbjct: 23 RKSDSGIWYWQCNTDEETCTRISSTVSRNTDTYPTLETCRLVC 65
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 21.0 bits (42), Expect = 5.7
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 165 TGSDFLIGMQAWSSSRSLRQISRWS 91
TG + + S SLR SRWS
Sbjct: 345 TGGNSASNSSGDAQSTSLRPFSRWS 369
>AF017415-2|AAB70263.1| 284|Tribolium castaneum abdominal-A
protein.
Length = 284
Score = 20.6 bits (41), Expect = 7.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 232 AQPSIHEGQPMPD 270
+QP+ GQP+PD
Sbjct: 117 SQPAAPGGQPIPD 129
>AF017415-1|AAB70262.1| 343|Tribolium castaneum abdominal-AII
protein.
Length = 343
Score = 20.6 bits (41), Expect = 7.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 232 AQPSIHEGQPMPD 270
+QP+ GQP+PD
Sbjct: 176 SQPAAPGGQPIPD 188
>AF017414-2|AAB70261.1| 150|Tribolium castaneum abdominal-A
protein.
Length = 150
Score = 20.6 bits (41), Expect = 7.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 232 AQPSIHEGQPMPD 270
+QP+ GQP+PD
Sbjct: 117 SQPAAPGGQPIPD 129
>AF017414-1|AAB70260.1| 209|Tribolium castaneum abdominal-AII
protein.
Length = 209
Score = 20.6 bits (41), Expect = 7.5
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +1
Query: 232 AQPSIHEGQPMPD 270
+QP+ GQP+PD
Sbjct: 176 SQPAAPGGQPIPD 188
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.2 bits (40), Expect = 9.9
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +2
Query: 245 FMKVSPCLMVCQRTLMRVA*IPAMTSRLALGI 340
F + PC+++ L+ P +L LG+
Sbjct: 216 FNLIVPCVLISSMALLGFTLPPDSGEKLTLGV 247
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 20.2 bits (40), Expect = 9.9
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +2
Query: 245 FMKVSPCLMVCQRTLMRVA*IPAMTSRLALGI 340
F + PC+++ L+ P +L LG+
Sbjct: 216 FNLIVPCVLISSMALLGFTLPPDSGEKLTLGV 247
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.2 bits (40), Expect = 9.9
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +2
Query: 245 FMKVSPCLMVCQRTLMRVA*IPAMTSRLALGI 340
F + PC+++ L+ P +L LG+
Sbjct: 216 FNLIVPCVLISSMALLGFTLPPDSGEKLTLGV 247
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.2 bits (40), Expect = 9.9
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +2
Query: 245 FMKVSPCLMVCQRTLMRVA*IPAMTSRLALGI 340
F + PC+++ L+ P +L LG+
Sbjct: 216 FNLIVPCVLISSMALLGFTLPPDSGEKLTLGV 247
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 20.2 bits (40), Expect = 9.9
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +2
Query: 245 FMKVSPCLMVCQRTLMRVA*IPAMTSRLALGI 340
F + PC+++ L+ P +L LG+
Sbjct: 216 FNLIVPCVLISSMALLGFTLPPDSGEKLTLGV 247
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 20.2 bits (40), Expect = 9.9
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -1
Query: 304 SRDPHQCPLADHQAWADL 251
S DP + L + WADL
Sbjct: 675 SLDPEKLLLKEFDPWADL 692
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 20.2 bits (40), Expect = 9.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = +2
Query: 119 LEEDHACIPIKKSDPVVXY 175
L ED PI+ +P+V Y
Sbjct: 66 LTEDLNSAPIRMKNPIVKY 84
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,816
Number of Sequences: 336
Number of extensions: 2231
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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