Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0104.Seq
         (469 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    27   0.43 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   2.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   2.3  
AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein ...    23   4.0  
AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.           23   5.3  
AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein ...    23   7.0  
DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    22   9.3  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.6 bits (56), Expect = 0.43
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 206 AGPIPQXRSHGTTRQGQTS*LECKHG 129
           AGPIP  + H   +Q Q S L  KHG
Sbjct: 244 AGPIPSQQKHQQHQQQQQSVLLPKHG 269


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 162 GSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIH 43
           G DFL+ +Q    +   RQ  RW +  P  +    SSLIH
Sbjct: 817 GHDFLLAIQEQCVTVIERQQGRWKALKPFDI--EKSSLIH 854


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.2 bits (50), Expect = 2.3
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = -2

Query: 162 GSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSLIH 43
           G DFL+ +Q    +   RQ  RW +  P  +    SSLIH
Sbjct: 818 GHDFLLAIQEQCVTVIERQQGRWKALKPFDI--EKSSLIH 855


>AF283268-1|AAG15373.1|   46|Anopheles gambiae ribosomal protein S18
           protein.
          Length = 46

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -2

Query: 414 WGRYPRGQSTKSTG 373
           WG   RGQ TK+TG
Sbjct: 21  WGLRVRGQHTKTTG 34


>AY645022-1|AAT92558.1|  165|Anopheles gambiae hairy protein.
          Length = 165

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 183 VSRYXTTGSDFLIGMQAWSSSRSLRQISRWSSPAPATMCSPDSSL 49
           V+    + + +L   Q  SSS S    S  SS + ++  SPDS L
Sbjct: 92  VNSSSNSSTGYLHQHQQSSSSSSSSSSSSMSSSSSSSFSSPDSPL 136


>AY263176-1|AAP78791.1|  705|Anopheles gambiae TmcB-like protein
           protein.
          Length = 705

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 419 DVGAGTLGAKAPNXRASVTSY 357
           DVGAGT  A   N  +S + Y
Sbjct: 684 DVGAGTASAGTTNSTSSSSGY 704


>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
          polypeptide protein.
          Length = 161

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 6/19 (31%), Positives = 11/19 (57%)
 Frame = -2

Query: 96 WSSPAPATMCSPDSSLIHC 40
          ++ P P  +C P+  L+ C
Sbjct: 26 YAHPYPYDLCGPNEELLEC 44


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 499,787
Number of Sequences: 2352
Number of extensions: 9751
Number of successful extensions: 32
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40820256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)