Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0102.Seq
         (558 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    26   0.96 
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       26   0.96 
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       26   0.96 
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       26   0.96 
EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton anti...    23   5.1  
AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding pr...    23   5.1  
AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding pr...    23   5.1  
AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding pr...    23   5.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.0  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.8 bits (54), Expect = 0.96
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -2

Query: 437 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGDE 309
           FDD + + L++  EDS  D TLI + L D + ++  S  + DGD+
Sbjct: 334 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGDD 377


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.8 bits (54), Expect = 0.96
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -2

Query: 437 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGDE 309
           FDD + + L++  EDS  D TLI + L D + ++  S  + DGD+
Sbjct: 104 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGDD 147


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 25.8 bits (54), Expect = 0.96
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -2

Query: 437 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGDE 309
           FDD + + L++  EDS  D TLI + L D + ++  S  + DGD+
Sbjct: 110 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGDD 153


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.8 bits (54), Expect = 0.96
 Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -2

Query: 437 FDDAIAE-LDTLNEDSYKDSTLIMQLLRD-NLTLWTSDTQGDGDE 309
           FDD + + L++  EDS  D TLI + L D + ++  S  + DGD+
Sbjct: 104 FDDDVGDRLESEEEDS-TDETLIEEELTDTDSSMCDSTNEDDGDD 147


>EF014219-1|ABJ91581.1|  647|Anopheles gambiae cation proton
           antiporter protein.
          Length = 647

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = -2

Query: 395 SYKDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGDN*YLAALTPA 261
           SY+    I+ ++   + LW +     GD  A GG    L  LT A
Sbjct: 145 SYRQFARILSIILIGVLLWITAFVIIGDTAAPGGQLFQLVVLTVA 189


>AY146758-1|AAO12073.1|  289|Anopheles gambiae odorant-binding
           protein AgamOBP30 protein.
          Length = 289

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -2

Query: 185 EADASRRL*KC*KSFAADLPVPSKIKCCVIFDGFVFLYLHW 63
           + D  RR  +C  S   D P P    C   ++ F   Y H+
Sbjct: 118 DCDYERRTYRCLHSQRLDRPAPHDEACERAYESFRCYYEHY 158


>AJ618930-1|CAF02010.2|  273|Anopheles gambiae odorant-binding
           protein OBPjj83c protein.
          Length = 273

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -2

Query: 185 EADASRRL*KC*KSFAADLPVPSKIKCCVIFDGFVFLYLHW 63
           + D  RR  +C  S   D P P    C   ++ F   Y H+
Sbjct: 102 DCDYERRTYRCLHSQRLDRPAPHDEACERAYESFRCYYEHY 142


>AF393485-1|AAL60410.1|  289|Anopheles gambiae odorant binding
           protein 1 protein.
          Length = 289

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 12/41 (29%), Positives = 17/41 (41%)
 Frame = -2

Query: 185 EADASRRL*KC*KSFAADLPVPSKIKCCVIFDGFVFLYLHW 63
           + D  RR  +C  S   D P P    C   ++ F   Y H+
Sbjct: 118 DCDYERRTYRCLHSQRLDRPAPHDEACERAYESFRCYYEHY 158


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = +3

Query: 282  ILVVAALGRLVAIALSV*RPKRQVISQQLHY*RRIFVRIF 401
            ++ +  L  L      V  P+R ++   L+Y  RIF  IF
Sbjct: 1311 VITMILLSSLALALEDVHLPQRPILQDILYYMDRIFTVIF 1350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 527,385
Number of Sequences: 2352
Number of extensions: 10417
Number of successful extensions: 64
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)