Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0102.Seq
(558 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10) ide... 134 3e-32
At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10) ide... 134 3e-32
At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1) i... 127 6e-30
At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identi... 126 1e-29
At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general... 126 1e-29
At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identica... 126 1e-29
At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10) ide... 126 1e-29
At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11) ide... 124 3e-29
At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identi... 124 3e-29
At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical... 123 9e-29
At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1... 121 3e-28
At3g02520.1 68416.m00240 14-3-3 protein GF14 nu (GRF7) identical... 120 5e-28
At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identi... 120 9e-28
At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5) iden... 119 2e-27
At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identi... 118 2e-27
At1g78220.1 68414.m09115 14-3-3 protein GF14 pi (GRF13) similar ... 68 4e-12
At2g10450.1 68415.m01098 14-3-3 protein, putative / grf15, putat... 56 2e-08
At1g22290.1 68414.m02787 14-3-3 protein GF14, putative (GRF10) s... 40 0.001
At2g01070.1 68415.m00013 expressed protein similar to membrane p... 28 3.7
At3g55530.1 68416.m06166 zinc finger (C3HC4-type RING finger) fa... 28 4.9
At3g21310.1 68416.m02692 expressed protein contains Pfam profile... 28 4.9
At1g28230.1 68414.m03465 purine permease (PUP1) identical to pur... 28 4.9
At3g60430.1 68416.m06759 hypothetical protein 27 8.5
>At1g22300.2 68414.m02789 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 134 bits (325), Expect = 3e-32
Identities = 62/80 (77%), Positives = 69/80 (86%)
Frame = -2
Query: 530 PHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 351
P + G +NFSVFYYEILNSP+ ACQLAKQAFDDAIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct: 169 PVRLGLALNFSVFYYEILNSPESACQLAKQAFDDAIAELDSLNEESYKDSTLIMQLLRDN 228
Query: 350 LTLWTSDTQGDGDEPAEGGD 291
LTLWTSD +GDE +G D
Sbjct: 229 LTLWTSDLNEEGDERTKGAD 248
>At1g22300.1 68414.m02788 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 254
Score = 134 bits (325), Expect = 3e-32
Identities = 62/80 (77%), Positives = 69/80 (86%)
Frame = -2
Query: 530 PHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 351
P + G +NFSVFYYEILNSP+ ACQLAKQAFDDAIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct: 169 PVRLGLALNFSVFYYEILNSPESACQLAKQAFDDAIAELDSLNEESYKDSTLIMQLLRDN 228
Query: 350 LTLWTSDTQGDGDEPAEGGD 291
LTLWTSD +GDE +G D
Sbjct: 229 LTLWTSDLNEEGDERTKGAD 248
>At5g38480.1 68418.m04651 14-3-3 protein GF14 psi (GRF3) (RCI1)
identical to 14-3-3 protein GF14 psi GI:1168200,
SP:P42644
Length = 255
Score = 127 bits (306), Expect = 6e-30
Identities = 64/84 (76%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Frame = -2
Query: 548 ENAAHTPHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIM 369
E A P + G +NFSVFYYEILNSPD+AC LAKQAFDDAIAELDTL E+SYKDSTLIM
Sbjct: 164 ELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDDAIAELDTLGEESYKDSTLIM 223
Query: 368 QLLRDNLTLWTSD-TQGDGDEPAE 300
QLLRDNLTLWTSD T GDE E
Sbjct: 224 QLLRDNLTLWTSDMTDEAGDEIKE 247
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = -3
Query: 550 AKMQPTHPIRLGLA 509
A++ PTHPIRLGLA
Sbjct: 163 AELAPTHPIRLGLA 176
>At1g78300.1 68414.m09125 14-3-3 protein GF14 omega (GRF2) identical
to GF14omega isoform GI:487791 from [Arabidopsis
thaliana]
Length = 259
Score = 126 bits (304), Expect = 1e-29
Identities = 63/84 (75%), Positives = 68/84 (80%), Gaps = 1/84 (1%)
Frame = -2
Query: 548 ENAAHTPHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIM 369
E A P + G +NFSVFYYEILNSPD+AC LAKQAFD+AIAELDTL E+SYKDSTLIM
Sbjct: 165 ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIM 224
Query: 368 QLLRDNLTLWTSDTQGD-GDEPAE 300
QLLRDNLTLWTSD Q D DE E
Sbjct: 225 QLLRDNLTLWTSDMQDDAADEIKE 248
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -3
Query: 556 SKAKMQPTHPIRLGLA 509
+ A++ PTHPIRLGLA
Sbjct: 162 ANAELAPTHPIRLGLA 177
>At4g09000.1 68417.m01487 14-3-3-like protein GF14 chi / general
regulatory factor 1 (GRF1) identical to 14-3-3 protein
GF14 chi chain GI:1702986, SP:P42643 from [Arabidopsis
thaliana]
Length = 267
Score = 126 bits (303), Expect = 1e-29
Identities = 60/77 (77%), Positives = 65/77 (84%)
Frame = -2
Query: 548 ENAAHTPHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIM 369
E A P + G +NFSVFYYEILNSPD+AC LAKQAFD+AIAELDTL E+SYKDSTLIM
Sbjct: 170 ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIM 229
Query: 368 QLLRDNLTLWTSDTQGD 318
QLLRDNLTLWTSD Q D
Sbjct: 230 QLLRDNLTLWTSDMQDD 246
Score = 27.5 bits (58), Expect = 6.4
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -3
Query: 556 SKAKMQPTHPIRLGLA 509
+ +++ PTHPIRLGLA
Sbjct: 167 ANSELAPTHPIRLGLA 182
>At1g35160.1 68414.m04360 14-3-3 protein GF14 phi (GRF4) identical
to GF14 protein phi chain GI:1493805, SP:P46077 from
[Arabidopsis thaliana]
Length = 267
Score = 126 bits (303), Expect = 1e-29
Identities = 60/80 (75%), Positives = 66/80 (82%)
Frame = -2
Query: 548 ENAAHTPHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIM 369
E A P + G +NFSVFYYEILNSPD+AC LAKQAFD+AIAELDTL E+SYKDSTLIM
Sbjct: 171 ELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIM 230
Query: 368 QLLRDNLTLWTSDTQGDGDE 309
QLLRDNLTLWTSD Q + E
Sbjct: 231 QLLRDNLTLWTSDMQDESPE 250
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = -3
Query: 556 SKAKMQPTHPIRLGLA 509
+ A++ PTHPIRLGLA
Sbjct: 168 ANAELAPTHPIRLGLA 183
>At1g22300.3 68414.m02790 14-3-3 protein GF14 epsilon (GRF10)
identical to 14-3-3 protein GF14 epsilon GI:5802798,
SP:P48347 from [Arabidopsis thaliana]
Length = 251
Score = 126 bits (303), Expect = 1e-29
Identities = 58/72 (80%), Positives = 64/72 (88%)
Frame = -2
Query: 530 PHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 351
P + G +NFSVFYYEILNSP+ ACQLAKQAFDDAIAELD+LNE+SYKDSTLIMQLLRDN
Sbjct: 169 PVRLGLALNFSVFYYEILNSPESACQLAKQAFDDAIAELDSLNEESYKDSTLIMQLLRDN 228
Query: 350 LTLWTSDTQGDG 315
LTLWTSD +G
Sbjct: 229 LTLWTSDLNEEG 240
>At1g34760.1 68414.m04323 14-3-3 protein GF14 omicron (GRF11)
identical to SP:Q9S9Z8, 14-3-3-like protein GF14 omicron
(General regulatory factor 11){Arabidopsis thaliana}
Length = 255
Score = 124 bits (300), Expect = 3e-29
Identities = 58/78 (74%), Positives = 69/78 (88%)
Frame = -2
Query: 530 PHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 351
P + G +NFSVFYYEILNSP++AC LAK+AFD+AIAELD+LNEDSYKDSTLIMQLLRDN
Sbjct: 169 PIRLGLALNFSVFYYEILNSPERACHLAKRAFDEAIAELDSLNEDSYKDSTLIMQLLRDN 228
Query: 350 LTLWTSDTQGDGDEPAEG 297
LTLWTSD + +G E ++G
Sbjct: 229 LTLWTSDLE-EGGEQSKG 245
>At1g26480.1 68414.m03229 14-3-3 protein GF14 iota (GRF12) identical
to 14-3-3 protein GF14iota GI:12963453 from [Arabidopsis
thaliana]
Length = 268
Score = 124 bits (300), Expect = 3e-29
Identities = 57/74 (77%), Positives = 65/74 (87%)
Frame = -2
Query: 530 PHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 351
P + G +NFSVFYYEI+NSP++AC LAKQAFD+AIAELDTL+E+SYKDSTLIMQLLRDN
Sbjct: 174 PIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDN 233
Query: 350 LTLWTSDTQGDGDE 309
LTLWTSD DG E
Sbjct: 234 LTLWTSDLPEDGGE 247
>At2g42590.1 68415.m05270 14-3-3 protein GF14 mu (GRF9) identical to
GF14 mu GI:3551052, SP:Q96299 from [Arabidopsis
thaliana]
Length = 263
Score = 123 bits (296), Expect = 9e-29
Identities = 55/76 (72%), Positives = 66/76 (86%)
Frame = -2
Query: 530 PHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 351
P + G +NFSVFYYEI+N+P++AC LAKQAFD+AI+ELDTLNE+SYKDSTLIMQLLRDN
Sbjct: 171 PIRLGLALNFSVFYYEIMNAPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDN 230
Query: 350 LTLWTSDTQGDGDEPA 303
LTLWTSD +G + A
Sbjct: 231 LTLWTSDISEEGGDDA 246
Score = 30.7 bits (66), Expect = 0.69
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = -3
Query: 556 SKAKMQPTHPIRLGLA 509
++AK+ PTHPIRLGLA
Sbjct: 162 AEAKLPPTHPIRLGLA 177
>At5g10450.1 68418.m01211 14-3-3 protein GF14 lambda (GRF6) (AFT1)
identical to 14-3-3 GF14lambda GI:1345595 from
[Arabidopsis thaliana]
Length = 248
Score = 121 bits (292), Expect = 3e-28
Identities = 57/74 (77%), Positives = 63/74 (85%)
Frame = -2
Query: 530 PHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 351
P + G +NFSVFYYEILNS DKAC +AKQAF++AIAELDTL E+SYKDSTLIMQLLRDN
Sbjct: 174 PIRLGLALNFSVFYYEILNSSDKACNMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDN 233
Query: 350 LTLWTSDTQGDGDE 309
LTLWTSD Q DE
Sbjct: 234 LTLWTSDMQEQMDE 247
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -3
Query: 550 AKMQPTHPIRLGLA 509
A M PTHPIRLGLA
Sbjct: 167 ADMAPTHPIRLGLA 180
>At3g02520.1 68416.m00240 14-3-3 protein GF14 nu (GRF7) identical to
14-3-3 protein GF14 nu GI:1531631 from [Arabidopsis
thaliana]
Length = 265
Score = 120 bits (290), Expect = 5e-28
Identities = 58/79 (73%), Positives = 65/79 (82%), Gaps = 2/79 (2%)
Frame = -2
Query: 530 PHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 351
P + G +NFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDN
Sbjct: 171 PIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDN 230
Query: 350 LTLWTSD--TQGDGDEPAE 300
LTLW SD + GDE E
Sbjct: 231 LTLWNSDINDEAGGDEIKE 249
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 550 AKMQPTHPIRLGLA 509
A + PTHPIRLGLA
Sbjct: 164 ADLAPTHPIRLGLA 177
>At5g65430.1 68418.m08228 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 248
Score = 120 bits (288), Expect = 9e-28
Identities = 56/74 (75%), Positives = 63/74 (85%)
Frame = -2
Query: 530 PHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 351
P + G +NFSVFYYEILNS +KAC +AKQAF++AIAELDTL E+SYKDSTLIMQLLRDN
Sbjct: 174 PIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDN 233
Query: 350 LTLWTSDTQGDGDE 309
LTLWTSD Q DE
Sbjct: 234 LTLWTSDMQEQMDE 247
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 550 AKMQPTHPIRLGLA 509
A + PTHPIRLGLA
Sbjct: 167 ADLAPTHPIRLGLA 180
>At5g16050.1 68418.m01876 14-3-3 protein GF14 upsilon (GRF5)
identical to 14-3-3 protein GF14 upsilon GI:2232148 from
[Arabidopsis thaliana]
Length = 268
Score = 119 bits (286), Expect = 2e-27
Identities = 57/78 (73%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = -2
Query: 530 PHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 351
P + G +NFSVFYYEILNS D+AC LAKQAFD+AI+ELDTL E+SYKDSTLIMQLLRDN
Sbjct: 173 PIRLGLALNFSVFYYEILNSSDRACSLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDN 232
Query: 350 LTLWTSDTQGD-GDEPAE 300
LTLWTSD + GD+ E
Sbjct: 233 LTLWTSDLNDEAGDDIKE 250
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 550 AKMQPTHPIRLGLA 509
A + PTHPIRLGLA
Sbjct: 166 ADLAPTHPIRLGLA 179
>At5g65430.2 68418.m08229 14-3-3 protein GF14 kappa (GRF8) identical
to 14-3-3 protein GF14 kappa GI:5802794, SP:P48348 from
[Arabidopsis thaliana]
Length = 246
Score = 118 bits (285), Expect = 2e-27
Identities = 55/71 (77%), Positives = 62/71 (87%)
Frame = -2
Query: 530 PHKAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDN 351
P + G +NFSVFYYEILNS +KAC +AKQAF++AIAELDTL E+SYKDSTLIMQLLRDN
Sbjct: 174 PIRLGLALNFSVFYYEILNSSEKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDN 233
Query: 350 LTLWTSDTQGD 318
LTLWTSD Q D
Sbjct: 234 LTLWTSDMQMD 244
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3
Query: 550 AKMQPTHPIRLGLA 509
A + PTHPIRLGLA
Sbjct: 167 ADLAPTHPIRLGLA 180
>At1g78220.1 68414.m09115 14-3-3 protein GF14 pi (GRF13) similar to
GF14 epsilon isoform GI:1022778 from [Arabidopsis
thaliana]; contains Pfam profile: PF00244 14-3-3
proteins
Length = 245
Score = 68.1 bits (159), Expect = 4e-12
Identities = 32/71 (45%), Positives = 51/71 (71%)
Frame = -2
Query: 524 KAGSGVNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLT 345
+ G +NFS+F YEI S + AC+L K+A+D+AI ELD L+++ ++S I+++L+ NL+
Sbjct: 172 RLGLALNFSIFNYEIHKSIESACKLVKKAYDEAITELDGLDKNICEESMYIIEMLKYNLS 231
Query: 344 LWTSDTQGDGD 312
WTS GDG+
Sbjct: 232 TWTS---GDGN 239
>At2g10450.1 68415.m01098 14-3-3 protein, putative / grf15, putative
contains similarity to GF14 psi chain GI:166717,
SP:P42644 from [Arabidopsis thaliana]
Length = 82
Score = 55.6 bits (128), Expect = 2e-08
Identities = 27/45 (60%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Frame = -2
Query: 431 DAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSD-TQGDGDEPAE 300
+A+ LD L ++ YKDSTLIM++LRDNLT WTSD T GDE E
Sbjct: 16 EALMMLDALGDELYKDSTLIMKILRDNLTFWTSDMTDEAGDEIKE 60
>At1g22290.1 68414.m02787 14-3-3 protein GF14, putative (GRF10)
similar to 14-3-3 protein GF14 epsilon GI:5802798 from
[Arabidopsis thaliana]
Length = 196
Score = 39.5 bits (88), Expect = 0.001
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -2
Query: 479 LNSPDKACQLAKQAFDDAIAELDT 408
LNSP+ A QLAKQAFDDAI E D+
Sbjct: 172 LNSPESAYQLAKQAFDDAINEFDS 195
>At2g01070.1 68415.m00013 expressed protein similar to membrane
protein PTM1 precursor isolog GB:AAB65479
Length = 496
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 378 RRIFVRIFVQCVQFGDGIVESLFGELTRLV 467
R+ RI + CV G G+V+S G LT V
Sbjct: 279 RKTVSRILILCVSMGFGVVKSTLGGLTSKV 308
>At3g55530.1 68416.m06166 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 273
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -2
Query: 497 VFYYEILNSPDKACQLAKQAFDDAIAE--LDTLNE 399
V Y++L+ P+ C LAKQA + AE LD+ NE
Sbjct: 167 VHKYKVLD-PENGCSLAKQASTSSSAEKMLDSANE 200
>At3g21310.1 68416.m02692 expressed protein contains Pfam profile
PF03267: Arabidopsis protein of unknown function, DUF266
Length = 383
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 248 SSVFIRKRVTFENVVWRGIITEADASRRL 162
SSVF R+++ ++V W G ++ DA RRL
Sbjct: 160 SSVFYRRQIPSQHVAW-GEMSMCDAERRL 187
>At1g28230.1 68414.m03465 purine permease (PUP1) identical to purine
permease GI:7620007 from [Arabidopsis thaliana]
Length = 356
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 151 KSRSQRTFPFRLKLNVVSSLTVLYFCI 71
K+R + TFP L++ +V L +FC+
Sbjct: 200 KARQEITFPLVLEIQMVMCLAATFFCV 226
>At3g60430.1 68416.m06759 hypothetical protein
Length = 258
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/33 (33%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +3
Query: 348 QVISQQLHY*-RRIFVRIFVQCVQFGDGIVESL 443
Q+I Q+H+ R+FV F++C+Q ++ +L
Sbjct: 62 QMIRSQIHFPIHRVFVSPFLRCIQTASEVIAAL 94
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,790,938
Number of Sequences: 28952
Number of extensions: 201158
Number of successful extensions: 617
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -