Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0101.Seq
         (548 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase pr...    23   5.0  
DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasm...    23   6.6  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    23   8.8  

>Z49813-1|CAA89967.1|  247|Anopheles gambiae serine proteinase
           protein.
          Length = 247

 Score = 23.4 bits (48), Expect = 5.0
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +2

Query: 347 QSARNHGICIVRSQKPIIFVTT 412
           Q++ NH I +++ +KP+ F  T
Sbjct: 93  QNSYNHDIALLKLRKPVEFTKT 114


>DQ518576-1|ABF66618.1|  276|Anopheles gambiae putative cytoplasmic
           carbonic anhydrase protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -2

Query: 394 WLLAPDNTNAMITGGLC 344
           W   P+NT +++  G C
Sbjct: 51  WTYVPENTRSLVNPGYC 67


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 22.6 bits (46), Expect = 8.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 328 KSYPQYTVRP*SWHLYCQEPEANNIC 405
           K Y  + V   S+H  C+EP+ +N+C
Sbjct: 276 KCYKCWKVGHTSYH--CREPDRSNLC 299


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 368,375
Number of Sequences: 2352
Number of extensions: 4736
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)