Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0100.Seq
         (598 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical prot...    26   1.1  
AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein...    24   3.2  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    24   4.3  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   4.3  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   5.7  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    23   7.5  

>AJ439060-18|CAD27769.1|  257|Anopheles gambiae hypothetical protein
           protein.
          Length = 257

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 156 CMKNCAVNSSSYFLPLVAFSAALVTLPPP 242
           C + C+ N S  F P V     +  +PPP
Sbjct: 42  CSRKCSRNGSPKFAPAVQSKNRMPPVPPP 70


>AF457553-1|AAL68783.1|  178|Anopheles gambiae mucin-like protein
           protein.
          Length = 178

 Score = 24.2 bits (50), Expect = 3.2
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = +2

Query: 236 TTSLLEVTALMTPTATVCLMSRTAKRPRGGNSWKDSTHRGLEGTKLTMAASPDLMDFGLT 415
           TTS    TA  T  AT    + TA       S  D+T    E T  T A +    D   T
Sbjct: 66  TTSAATTTAATTSAATTSEATTTAAASTTQASDSDNTTTTAEATTTTEAQTTSSSDNSTT 125

Query: 416 S 418
           +
Sbjct: 126 T 126


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 392 LEMQPLSTWYLPSLYV*SP 336
           LE  PL++W LP  YV  P
Sbjct: 632 LEPVPLASWQLPPPYVTEP 650


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +2

Query: 362 GTKLTMAASPDLMDFGLTSVDLPVRRSTFSLISANLQAMWAVWQSKTGVN 511
           G  LT A +      G+ S D+P    +F  ++  +  M   W S  G+N
Sbjct: 188 GLLLTAAVASVEFSAGV-SYDIPRISKSFHFLNVMVYDMHGAWDSYCGIN 236


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +1

Query: 475 NVGSVAIQDWCEPFEI*PGWLKHNDLSXKICSTLRLGC 588
           N+  +  +  CEP      W + +D   K+C T+ + C
Sbjct: 100 NIKKLCYEQDCEPI-----WKERDDAVAKLCRTMDVRC 132


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -3

Query: 110 ATNSFLFYIFYKACNVTLFYNLYKV 36
           A   FLF   Y+   +T FY LY++
Sbjct: 291 AAQVFLFVAAYETNAITTFYCLYEL 315


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,246
Number of Sequences: 2352
Number of extensions: 13488
Number of successful extensions: 40
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)