Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0099.Seq
(479 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 125 7e-29
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 125 7e-29
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 125 7e-29
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 125 7e-29
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 125 7e-29
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 125 7e-29
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 125 7e-29
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 125 7e-29
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 125 7e-29
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 125 7e-29
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 125 7e-29
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 125 7e-29
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 125 7e-29
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 125 7e-29
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 125 7e-29
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 125 7e-29
AK125080-1|BAC86045.1| 235|Homo sapiens protein ( Homo sapiens ... 29 8.5
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 125 bits (302), Expect = 7e-29
Identities = 61/84 (72%), Positives = 70/84 (83%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D E +F
Sbjct: 25 FSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAF 81
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKF+LI E VQG+N L N HGMDL
Sbjct: 82 RKFKLITEDVQGKNCLTNFHGMDL 105
Score = 103 bits (248), Expect = 2e-22
Identities = 47/73 (64%), Positives = 59/73 (80%)
Frame = +1
Query: 259 DKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRKK 438
DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+G T K + RKT YAQH QVR IRKK
Sbjct: 108 DKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKK 167
Query: 439 MCEIITRDVTNSE 477
M EI+TR+V ++
Sbjct: 168 MMEIMTREVQTND 180
>AK125080-1|BAC86045.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ43090 fis, clone COLON2001721, weakly similar
to Mus musculus GLUT4 vesicle protein. ).
Length = 235
Score = 29.1 bits (62), Expect = 8.5
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +2
Query: 152 QADTDAERSFRKFRLIAEYVQGRNVLCNXHGMDLKP 259
Q D S RL+ ++QGRN H DLKP
Sbjct: 200 QLDHSGLDSLISMRLVLRFLQGRNESWGAHTQDLKP 235
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,564,215
Number of Sequences: 237096
Number of extensions: 1302441
Number of successful extensions: 7049
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7032
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4270724850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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