Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0099.Seq
(479 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 144 7e-35
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 144 7e-35
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 144 7e-35
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 134 6e-32
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 107 8e-24
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 107 8e-24
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm... 28 5.8
AY070516-1|AAL47987.1| 387|Drosophila melanogaster GH21048p pro... 28 5.8
AE014298-2890|AAN09511.1| 387|Drosophila melanogaster CG14209-P... 28 5.8
AE014298-2889|AAF48982.2| 387|Drosophila melanogaster CG14209-P... 28 5.8
AE014298-2888|AAF48981.2| 387|Drosophila melanogaster CG14209-P... 28 5.8
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P... 28 5.8
AE014296-2526|ABC66138.1| 277|Drosophila melanogaster CG33985-P... 28 7.6
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 144 bits (348), Expect = 7e-35
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSF
Sbjct: 25 FSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSF 84
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKFRLIAE VQ RNVLCN HGMDL
Sbjct: 85 RKFRLIAEDVQDRNVLCNFHGMDL 108
Score = 107 bits (257), Expect = 8e-24
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = +1
Query: 256 TDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRK 435
TDK R MVKKWQTLIEA ++ KT DGY+LRVFCIG T KD SQRKTCYAQ +QVR IR
Sbjct: 110 TDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRA 169
Query: 436 KMCEIITRDVTNSE 477
+M +IIT +V+ ++
Sbjct: 170 RMTDIITNEVSGAD 183
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 144 bits (348), Expect = 7e-35
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSF
Sbjct: 25 FSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSF 84
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKFRLIAE VQ RNVLCN HGMDL
Sbjct: 85 RKFRLIAEDVQDRNVLCNFHGMDL 108
Score = 107 bits (257), Expect = 8e-24
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = +1
Query: 256 TDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRK 435
TDK R MVKKWQTLIEA ++ KT DGY+LRVFCIG T KD SQRKTCYAQ +QVR IR
Sbjct: 110 TDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRA 169
Query: 436 KMCEIITRDVTNSE 477
+M +IIT +V+ ++
Sbjct: 170 RMTDIITNEVSGAD 183
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 144 bits (348), Expect = 7e-35
Identities = 68/84 (80%), Positives = 73/84 (86%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSF 181
F+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ LKGRVFEVSLADLQ D D ERSF
Sbjct: 25 FSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVFEVSLADLQKDIDPERSF 84
Query: 182 RKFRLIAEYVQGRNVLCNXHGMDL 253
RKFRLIAE VQ RNVLCN HGMDL
Sbjct: 85 RKFRLIAEDVQDRNVLCNFHGMDL 108
Score = 107 bits (257), Expect = 8e-24
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = +1
Query: 256 TDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRK 435
TDK R MVKKWQTLIEA ++ KT DGY+LRVFCIG T KD SQRKTCYAQ +QVR IR
Sbjct: 110 TDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRA 169
Query: 436 KMCEIITRDVTNSE 477
+M +IIT +V+ ++
Sbjct: 170 RMTDIITNEVSGAD 183
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 134 bits (324), Expect = 6e-32
Identities = 65/85 (76%), Positives = 70/85 (82%), Gaps = 1/85 (1%)
Frame = +2
Query: 2 FTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLA-DLQADTDAERS 178
F+RKDWYDVKAP+MF RQ+G TLVNRTQG +IAS+ KGRVFEVSL DLQ D D E S
Sbjct: 25 FSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVFEVSLVPDLQKDIDPEHS 84
Query: 179 FRKFRLIAEYVQGRNVLCNXHGMDL 253
FRKFRLIAE VQ RNVLCN HGMDL
Sbjct: 85 FRKFRLIAEDVQDRNVLCNFHGMDL 109
Score = 101 bits (242), Expect = 5e-22
Identities = 48/75 (64%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Frame = +1
Query: 256 TDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRK 435
TDK R MVKKWQTLIEA ++ KT DGY+LRVFCIG T KD SQRKTCYA +QVR IR
Sbjct: 111 TDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRS 170
Query: 436 -KMCEIITRDVTNSE 477
+M +IIT +V+ ++
Sbjct: 171 GRMTDIITNEVSGAD 185
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 107 bits (257), Expect = 8e-24
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = +1
Query: 256 TDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRK 435
TDK R MVKKWQTLIEA ++ KT DGY+LRVFCIG T KD SQRKTCYAQ +QVR IR
Sbjct: 5 TDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRA 64
Query: 436 KMCEIITRDVTNSE 477
+M +IIT +V+ ++
Sbjct: 65 RMTDIITNEVSGAD 78
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 107 bits (257), Expect = 8e-24
Identities = 49/74 (66%), Positives = 59/74 (79%)
Frame = +1
Query: 256 TDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGXTNKDSLSQRKTCYAQHTQVRAIRK 435
TDK R MVKKWQTLIEA ++ KT DGY+LRVFCIG T KD SQRKTCYAQ +QVR IR
Sbjct: 60 TDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRA 119
Query: 436 KMCEIITRDVTNSE 477
+M +IIT +V+ ++
Sbjct: 120 RMTDIITNEVSGAD 133
Score = 81.0 bits (191), Expect = 8e-16
Identities = 39/45 (86%), Positives = 39/45 (86%)
Frame = +2
Query: 119 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNXHGMDL 253
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCN HGMDL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDL 58
>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
transmembrane protein protein.
Length = 3004
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 120 PFNP-SEAIFVPWVRLTSVVPTCLLLNIDGALTS 22
PF P + +FVPW R+ + P + L+ D TS
Sbjct: 963 PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996
>AY070516-1|AAL47987.1| 387|Drosophila melanogaster GH21048p
protein.
Length = 387
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = -3
Query: 390 ALAQGVLIGXTNAEDT*NVSIGCLHINVGFDESLPFFNHPPELIGLRSXPXKLXSTLRPC 211
+ A G + G A T + H + F E F ++PP+ + +S +L S R
Sbjct: 274 SFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMG 333
Query: 210 TYSAINLNLRKDLSASVSAC 151
AI L L AC
Sbjct: 334 GVPAIFSGLGPRLFKVAPAC 353
>AE014298-2890|AAN09511.1| 387|Drosophila melanogaster CG14209-PD,
isoform D protein.
Length = 387
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = -3
Query: 390 ALAQGVLIGXTNAEDT*NVSIGCLHINVGFDESLPFFNHPPELIGLRSXPXKLXSTLRPC 211
+ A G + G A T + H + F E F ++PP+ + +S +L S R
Sbjct: 274 SFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMG 333
Query: 210 TYSAINLNLRKDLSASVSAC 151
AI L L AC
Sbjct: 334 GVPAIFSGLGPRLFKVAPAC 353
>AE014298-2889|AAF48982.2| 387|Drosophila melanogaster CG14209-PC,
isoform C protein.
Length = 387
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = -3
Query: 390 ALAQGVLIGXTNAEDT*NVSIGCLHINVGFDESLPFFNHPPELIGLRSXPXKLXSTLRPC 211
+ A G + G A T + H + F E F ++PP+ + +S +L S R
Sbjct: 274 SFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMG 333
Query: 210 TYSAINLNLRKDLSASVSAC 151
AI L L AC
Sbjct: 334 GVPAIFSGLGPRLFKVAPAC 353
>AE014298-2888|AAF48981.2| 387|Drosophila melanogaster CG14209-PB,
isoform B protein.
Length = 387
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = -3
Query: 390 ALAQGVLIGXTNAEDT*NVSIGCLHINVGFDESLPFFNHPPELIGLRSXPXKLXSTLRPC 211
+ A G + G A T + H + F E F ++PP+ + +S +L S R
Sbjct: 274 SFAAGAISGSVAATITTPFDVVKTHEQIEFGEKFIFSDNPPKQVATKSVAMRLASIYRMG 333
Query: 210 TYSAINLNLRKDLSASVSAC 151
AI L L AC
Sbjct: 334 GVPAIFSGLGPRLFKVAPAC 353
>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
protein.
Length = 3004
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 120 PFNP-SEAIFVPWVRLTSVVPTCLLLNIDGALTS 22
PF P + +FVPW R+ + P + L+ D TS
Sbjct: 963 PFRPLTRTVFVPWNRIVVLPPVQMQLSDDDETTS 996
>AE014296-2526|ABC66138.1| 277|Drosophila melanogaster CG33985-PA
protein.
Length = 277
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/28 (35%), Positives = 14/28 (50%)
Frame = +1
Query: 19 VRCQGSVYVQQEASRHHACQPYPGNENC 102
VRC Y +E + H YP ++NC
Sbjct: 202 VRCLAMTYNPREQCKRHVIDVYPHSDNC 229
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,771,729
Number of Sequences: 53049
Number of extensions: 404507
Number of successful extensions: 1188
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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