Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0097.Seq
         (528 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.           23   6.3  
AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.            23   6.3  
AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.    23   8.4  

>DQ314781-1|ABC54566.1|  407|Anopheles gambiae OSKAR protein.
          Length = 407

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +1

Query: 115 GLLAPTTSWIVQFEGPQEITRVLELFSNSEDLMDEVLN 228
           GLLAPTTS   + E   ++  V+   S +   +DE+++
Sbjct: 2   GLLAPTTSCDGEEELQVQLRSVIITRSKAGATVDEIID 39


>AJ010299-1|CAA09070.1|  722|Anopheles gambiae stat protein.
          Length = 722

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 7/28 (25%), Positives = 15/28 (53%)
 Frame = -1

Query: 192 EKFKYASNFLWPFKLNNPTGGWRKKTIH 109
           E+F + ++  +P  +    G W K ++H
Sbjct: 14  EQFHFLNDLKYPVLIRQHLGNWIKDSLH 41


>AJ302662-1|CAC35527.1|   76|Anopheles gambiae gSG9 protein protein.
          Length = 76

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +1

Query: 13  FFYNYKSIYLNHPPEKIVDLVFAVTKVSAVDIMNG 117
           FF+ Y   YL+ P  ++      V + S V +  G
Sbjct: 26  FFFQYNRPYLSQPSSQLASTAANVVQRSNVTVALG 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,258
Number of Sequences: 2352
Number of extensions: 12825
Number of successful extensions: 73
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)