Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0095.Seq
         (705 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n...    77   3e-13
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ...    48   2e-04
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ...    44   0.005
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513...    38   0.18 
UniRef50_A3CG99 Cluster: Putative uncharacterized protein; n=1; ...    38   0.32 
UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subuni...    35   2.2  
UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:...    34   3.0  
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;...    33   5.2  
UniRef50_O80804 Cluster: T8F5.10; n=3; core eudicotyledons|Rep: ...    33   9.0  

>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
           Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
           Gallus gallus
          Length = 103

 Score = 77.4 bits (182), Expect = 3e-13
 Identities = 42/74 (56%), Positives = 46/74 (62%)
 Frame = +2

Query: 293 GAPTARRTNATTSFLTATILVYXXXXXXXXXXXXRLALQLFLVKIFKVYSFRLRGLVRVP 472
           G P AR  + TTSFLTA  L+Y            RLALQ  LVK FKV SF+L+GL RV 
Sbjct: 30  GGPPARSQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVL 89

Query: 473 YRYFSSLPPRAGVG 514
           Y YFSSLPPR G G
Sbjct: 90  YCYFSSLPPRVGSG 103


>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
           LRRG00114 - Rattus norvegicus (Rat)
          Length = 223

 Score = 48.0 bits (109), Expect = 2e-04
 Identities = 22/23 (95%), Positives = 22/23 (95%)
 Frame = +1

Query: 526 LLPSLDVVAVSQAPSPESNPDSP 594
           LLPSLDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189


>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 76

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 26/69 (37%), Positives = 39/69 (56%)
 Frame = +1

Query: 367 SWNYRGCWHQTCPPIVPR*NI*SVLIPITRPRKSPVSLFFVTTSPCRGG*FARLLPSLDV 546
           SWNYR CWHQT  P++    + +   PI   ++   + + +       G  +RLL  +D+
Sbjct: 7   SWNYRSCWHQT-GPLLGFGTVEN-RTPIHSTKRHQWN-WSLPPPKVSSGKVSRLLLPVDI 63

Query: 547 VAVSQAPSP 573
           VA+SQAPSP
Sbjct: 64  VAISQAPSP 72


>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
           n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein PY05130 - Plasmodium yoelii yoelii
          Length = 402

 Score = 38.3 bits (85), Expect = 0.18
 Identities = 16/23 (69%), Positives = 20/23 (86%)
 Frame = +1

Query: 547 VAVSQAPSPESNPDSPLPVTTMV 615
           +A+SQAPSPESN +SPLPV  M+
Sbjct: 372 LAISQAPSPESNSNSPLPVKAML 394


>UniRef50_A3CG99 Cluster: Putative uncharacterized protein; n=1;
           Oryza sativa (japonica cultivar-group)|Rep: Putative
           uncharacterized protein - Oryza sativa subsp. japonica
           (Rice)
          Length = 220

 Score = 37.5 bits (83), Expect = 0.32
 Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
 Frame = +1

Query: 445 PITRPRKSPVSLFFVTTSPCRGG*FARLLPSLDVVAVSQAPSPESNP--DSPLPVTTMVV 618
           P ++ R +P SL    +  C+ G   RL  S  +VA+ + P P S+P  D P   TT+ +
Sbjct: 86  PSSQLRAAPRSLLSSPSPHCQEGHDPRLCVSAGLVAIPRCPPPTSSPSLDPPESSTTVAL 145

Query: 619 AETTIRKLIRQTFGK 663
            E   R+L  +  G+
Sbjct: 146 IELDDRRLDLEAVGR 160


>UniRef50_A1VP16 Cluster: Peptidase C14, caspase catalytic subunit
           p20; n=1; Polaromonas naphthalenivorans CJ2|Rep:
           Peptidase C14, caspase catalytic subunit p20 -
           Polaromonas naphthalenivorans (strain CJ2)
          Length = 562

 Score = 34.7 bits (76), Expect = 2.2
 Identities = 16/54 (29%), Positives = 27/54 (50%)
 Frame = +1

Query: 208 RILILNRRFLERRLTEICSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRYWS 369
           R++   ++F            V+  PR+R  D AA + NY L NR+N+ +  W+
Sbjct: 142 RVMSFQKKFKSPEFAAQYDRPVNAPPRVRAADPAAVQANY-LANRSNYEVSQWT 194


>UniRef50_Q8WXI7 Cluster: Mucin-16; n=23; cellular organisms|Rep:
            Mucin-16 - Homo sapiens (Human)
          Length = 22152

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +1

Query: 463  KSPVSLFFVTTSPCR--GG*FARLLPSLDVVAVSQAPSPESNPDSPLPVTTMVVA 621
            ++P  + ++TT P       F+ + PS+   +   + SPES P SPLPVT ++ +
Sbjct: 5614 RTPGDVSWMTTPPVEETSSGFSLMSPSMTSPSPVSSTSPESIPSSPLPVTALLTS 5668


>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
           n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
           protein - Monodelphis domestica
          Length = 493

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +1

Query: 457 PRKSPVSLFFVTTSPCR 507
           PRKSPV LFFVTTSP R
Sbjct: 24  PRKSPVLLFFVTTSPGR 40


>UniRef50_O80804 Cluster: T8F5.10; n=3; core eudicotyledons|Rep:
           T8F5.10 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 482

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
 Frame = +1

Query: 442 IPITRPRKSPVSLFFVTTSPCRGG*FARLLPSLDVVA-VSQAPSPESNPDSPLPVTTMVV 618
           IP+ R R +P    FV  S  R   F  +L SLD+VA +++    +      +PV+ +V 
Sbjct: 44  IPVWRKRTTPSLPGFVENSEMRQQRFVGILNSLDIVAFLAKTECLQEEKAMKIPVSEVVS 103

Query: 619 AETTIRKLI 645
            + T+ K +
Sbjct: 104 PDNTLLKQV 112


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 708,467,826
Number of Sequences: 1657284
Number of extensions: 14670376
Number of successful extensions: 39281
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 37636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39258
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)