Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0092.Seq
         (672 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domai...    25   2.9  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   2.9  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   2.9  

>DQ370037-1|ABD18598.1|  121|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 121

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
 Frame = +2

Query: 191 IVIPEKAQSKVLHGEVVAVGPEP---EKKMETSSPFKL 295
           I   EK   +  HGE V   PEP   E   E S P K+
Sbjct: 19  IASAEKTDQEAEHGETVPATPEPSTTEATEEESPPPKI 56


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 313 LLPEYGGTKVSLENDEKEYHLFRESD 390
           LL E  GT+V  E  E+  +L RES+
Sbjct: 158 LLREVAGTRVYDERKEESMNLLRESE 183


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 519  YLSCNTCISYYNNNYWYK 572
            YL  NTCI + +  +W K
Sbjct: 1184 YLRTNTCIEWDDKKFWQK 1201


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,180
Number of Sequences: 2352
Number of extensions: 10383
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)