Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0092.Seq
(672 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X75821-1|CAA53455.1| 102|Homo sapiens heat shock protein 10 pro... 62 1e-09
U07550-1|AAA50953.1| 102|Homo sapiens chaperonin 10 protein. 62 1e-09
CR407688-1|CAG28616.1| 102|Homo sapiens HSPE1 protein. 62 1e-09
BC023518-1|AAH23518.1| 102|Homo sapiens heat shock 10kDa protei... 62 1e-09
AJ250915-1|CAB75425.1| 102|Homo sapiens chaperonin 10, Hsp10 pr... 62 1e-09
AC020550-3|AAX93146.1| 102|Homo sapiens unknown protein. 62 1e-09
AF109872-1|AAC96332.1| 97|Homo sapiens chaperonin 10-related p... 60 5e-09
AF107894-1|AAC95387.1| 99|Homo sapiens chaperonin 10 protein. 60 9e-09
AK131104-1|BAC85154.1| 2760|Homo sapiens FLJ00341 protein protein. 32 1.6
AB011112-1|BAA25466.3| 2041|Homo sapiens KIAA0540 protein protein. 32 1.6
>X75821-1|CAA53455.1| 102|Homo sapiens heat shock protein 10
protein.
Length = 102
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 265 ENGDFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 402
+ G+ PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL K
Sbjct: 56 KGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99
Score = 56.8 bits (131), Expect = 7e-08
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +2
Query: 113 AVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVG 250
A ++ +PL DRVL++R+ A T T GGI++PEK+Q KVL VVAVG
Sbjct: 5 AFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVG 50
>U07550-1|AAA50953.1| 102|Homo sapiens chaperonin 10 protein.
Length = 102
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 265 ENGDFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 402
+ G+ PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL K
Sbjct: 56 KGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99
Score = 56.8 bits (131), Expect = 7e-08
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +2
Query: 113 AVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVG 250
A ++ +PL DRVL++R+ A T T GGI++PEK+Q KVL VVAVG
Sbjct: 5 AFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVG 50
>CR407688-1|CAG28616.1| 102|Homo sapiens HSPE1 protein.
Length = 102
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 265 ENGDFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 402
+ G+ PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL K
Sbjct: 56 KGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99
Score = 56.8 bits (131), Expect = 7e-08
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +2
Query: 113 AVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVG 250
A ++ +PL DRVL++R+ A T T GGI++PEK+Q KVL VVAVG
Sbjct: 5 AFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVG 50
>BC023518-1|AAH23518.1| 102|Homo sapiens heat shock 10kDa protein 1
(chaperonin 10) protein.
Length = 102
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 265 ENGDFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 402
+ G+ PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL K
Sbjct: 56 KGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99
Score = 56.8 bits (131), Expect = 7e-08
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +2
Query: 113 AVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVG 250
A ++ +PL DRVL++R+ A T T GGI++PEK+Q KVL VVAVG
Sbjct: 5 AFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVG 50
>AJ250915-1|CAB75425.1| 102|Homo sapiens chaperonin 10, Hsp10
protein protein.
Length = 102
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 265 ENGDFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 402
+ G+ PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL K
Sbjct: 56 KGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99
Score = 56.8 bits (131), Expect = 7e-08
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +2
Query: 113 AVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVG 250
A ++ +PL DRVL++R+ A T T GGI++PEK+Q KVL VVAVG
Sbjct: 5 AFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVG 50
>AC020550-3|AAX93146.1| 102|Homo sapiens unknown protein.
Length = 102
Score = 62.5 bits (145), Expect = 1e-09
Identities = 30/46 (65%), Positives = 35/46 (76%)
Frame = +1
Query: 265 ENGDFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 402
+ G+ PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL K
Sbjct: 56 KGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDILGK 99
Score = 56.8 bits (131), Expect = 7e-08
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +2
Query: 113 AVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVG 250
A ++ +PL DRVL++R+ A T T GGI++PEK+Q KVL VVAVG
Sbjct: 5 AFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVG 50
>AF109872-1|AAC96332.1| 97|Homo sapiens chaperonin 10-related
protein protein.
Length = 97
Score = 60.5 bits (140), Expect = 5e-09
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = +1
Query: 265 ENGDFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDIL 396
+ G+ PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ DIL
Sbjct: 55 KGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGDIL 96
Score = 56.8 bits (131), Expect = 7e-08
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +2
Query: 113 AVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVG 250
A ++ +PL DRVL++R+ A T T GGI++PEK+Q KVL VVAVG
Sbjct: 4 AFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVG 49
>AF107894-1|AAC95387.1| 99|Homo sapiens chaperonin 10 protein.
Length = 99
Score = 59.7 bits (138), Expect = 9e-09
Identities = 29/46 (63%), Positives = 34/46 (73%)
Frame = +1
Query: 265 ENGDFIPVQVSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAK 402
+ G+ PV V VGDKVLLPEYGGTKV L D+K+Y LFR+ IL K
Sbjct: 55 KGGEIQPVSVKVGDKVLLPEYGGTKVVL--DDKDYFLFRDGXILGK 98
Score = 56.8 bits (131), Expect = 7e-08
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +2
Query: 113 AVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVG 250
A ++ +PL DRVL++R+ A T T GGI++PEK+Q KVL VVAVG
Sbjct: 4 AFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVG 49
>AK131104-1|BAC85154.1| 2760|Homo sapiens FLJ00341 protein protein.
Length = 2760
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 125 LVPLLDRVLI--KRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPEPEKKMETSSPFKLV 298
L+PLL+RV K AEA +V PE G V+ +G E++ME ++ +
Sbjct: 901 LLPLLERVAAQPKEAEAGPAETHDLVGPELTSGHNTQGLVLPLGKSSEERMERNAVAAFL 960
Query: 299 WVIKFFFQNTAV 334
+++ F Q V
Sbjct: 961 LMLRNFLQGHMV 972
>AB011112-1|BAA25466.3| 2041|Homo sapiens KIAA0540 protein protein.
Length = 2041
Score = 32.3 bits (70), Expect = 1.6
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +2
Query: 125 LVPLLDRVLI--KRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPEPEKKMETSSPFKLV 298
L+PLL+RV K AEA +V PE G V+ +G E++ME ++ +
Sbjct: 366 LLPLLERVAAQPKEAEAGPAETHDLVGPELTSGHNTQGLVLPLGKSSEERMERNAVAAFL 425
Query: 299 WVIKFFFQNTAV 334
+++ F Q V
Sbjct: 426 LMLRNFLQGHMV 437
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,782,882
Number of Sequences: 237096
Number of extensions: 1586138
Number of successful extensions: 2707
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2620
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2699
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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