Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0091.Seq
         (548 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   5.4  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   5.4  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   7.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.4  

>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 1   IN*SKLRMAAKLLYFVLFIAAAV 69
           +N SK+ +   + YFV+FI   +
Sbjct: 32  VNYSKIGIVQTVAYFVIFIILTI 54


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 176 LNNVYFTSISIFSTKYL 126
           LNN YF    +F + YL
Sbjct: 294 LNNFYFIIFQVFESFYL 310


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -1

Query: 506 GHNCECRP 483
           GH C+C+P
Sbjct: 51  GHRCQCQP 58


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 254 PPTTVNTSGWKPLSTS 207
           PP+T +  G KP+ T+
Sbjct: 415 PPSTPSADGSKPVQTT 430


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,175
Number of Sequences: 336
Number of extensions: 2501
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13516233
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)