Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0090.Seq
(499 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011039-1|AAR30199.1| 463|Drosophila melanogaster LP10071p pro... 145 3e-35
BT001873-1|AAN71645.1| 362|Drosophila melanogaster SD08285p pro... 145 3e-35
AY089522-1|AAL90260.1| 362|Drosophila melanogaster GM14559p pro... 145 3e-35
AE013599-1358|AAM68698.1| 463|Drosophila melanogaster CG8280-PB... 145 3e-35
AE013599-1357|AAF58608.1| 463|Drosophila melanogaster CG8280-PA... 145 3e-35
X06869-1|CAA29993.1| 463|Drosophila melanogaster EF-1-alpha pro... 142 2e-34
M11744-1|AAA28526.1| 463|Drosophila melanogaster protein ( D.me... 142 2e-34
BT015202-1|AAT94431.1| 462|Drosophila melanogaster RE68984p pro... 140 7e-34
AE014297-4793|AAS65236.1| 462|Drosophila melanogaster CG1873-PD... 140 7e-34
AE014297-4792|AAS65235.1| 462|Drosophila melanogaster CG1873-PC... 140 7e-34
AE014297-4791|AAN14285.1| 462|Drosophila melanogaster CG1873-PB... 140 7e-34
AE014297-4790|AAF57185.1| 462|Drosophila melanogaster CG1873-PA... 140 7e-34
X06870-1|CAA29994.1| 462|Drosophila melanogaster EF-1-alpha pro... 136 1e-32
U88868-1|AAC24943.1| 619|Drosophila melanogaster elongation fac... 53 2e-07
AY070979-1|AAL48601.1| 619|Drosophila melanogaster RE07731p pro... 53 2e-07
AE014134-2205|AAF53194.1| 619|Drosophila melanogaster CG6382-PA... 53 2e-07
BT003766-1|AAO41445.1| 670|Drosophila melanogaster RE29053p pro... 46 3e-05
AY060736-1|AAL28284.1| 194|Drosophila melanogaster GH18819p pro... 46 3e-05
AE014296-376|AAF47584.2| 670|Drosophila melanogaster CG1898-PA ... 46 3e-05
>BT011039-1|AAR30199.1| 463|Drosophila melanogaster LP10071p
protein.
Length = 463
Score = 145 bits (352), Expect = 3e-35
Identities = 70/79 (88%), Positives = 74/79 (93%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEKV RR+GK+TE NPK IKSGDAAIV LVPSKPLCVE+FQEFPPLGRFAVRDMRQTVA
Sbjct: 375 IKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIKAVNFK+A GGKVTK
Sbjct: 435 VGVIKAVNFKDASGGKVTK 453
>BT001873-1|AAN71645.1| 362|Drosophila melanogaster SD08285p
protein.
Length = 362
Score = 145 bits (352), Expect = 3e-35
Identities = 70/79 (88%), Positives = 74/79 (93%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEKV RR+GK+TE NPK IKSGDAAIV LVPSKPLCVE+FQEFPPLGRFAVRDMRQTVA
Sbjct: 274 IKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVA 333
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIKAVNFK+A GGKVTK
Sbjct: 334 VGVIKAVNFKDASGGKVTK 352
>AY089522-1|AAL90260.1| 362|Drosophila melanogaster GM14559p
protein.
Length = 362
Score = 145 bits (352), Expect = 3e-35
Identities = 70/79 (88%), Positives = 74/79 (93%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEKV RR+GK+TE NPK IKSGDAAIV LVPSKPLCVE+FQEFPPLGRFAVRDMRQTVA
Sbjct: 274 IKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVA 333
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIKAVNFK+A GGKVTK
Sbjct: 334 VGVIKAVNFKDASGGKVTK 352
>AE013599-1358|AAM68698.1| 463|Drosophila melanogaster CG8280-PB,
isoform B protein.
Length = 463
Score = 145 bits (352), Expect = 3e-35
Identities = 70/79 (88%), Positives = 74/79 (93%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEKV RR+GK+TE NPK IKSGDAAIV LVPSKPLCVE+FQEFPPLGRFAVRDMRQTVA
Sbjct: 375 IKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIKAVNFK+A GGKVTK
Sbjct: 435 VGVIKAVNFKDASGGKVTK 453
>AE013599-1357|AAF58608.1| 463|Drosophila melanogaster CG8280-PA,
isoform A protein.
Length = 463
Score = 145 bits (352), Expect = 3e-35
Identities = 70/79 (88%), Positives = 74/79 (93%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEKV RR+GK+TE NPK IKSGDAAIV LVPSKPLCVE+FQEFPPLGRFAVRDMRQTVA
Sbjct: 375 IKEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIKAVNFK+A GGKVTK
Sbjct: 435 VGVIKAVNFKDASGGKVTK 453
>X06869-1|CAA29993.1| 463|Drosophila melanogaster EF-1-alpha
protein.
Length = 463
Score = 142 bits (345), Expect = 2e-34
Identities = 69/79 (87%), Positives = 73/79 (92%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
I EKV RR+GK+TE NPK IKSGDAAIV LVPSKPLCVE+FQEFPPLGRFAVRDMRQTVA
Sbjct: 375 ILEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIKAVNFK+A GGKVTK
Sbjct: 435 VGVIKAVNFKDASGGKVTK 453
>M11744-1|AAA28526.1| 463|Drosophila melanogaster protein (
D.melanogaster 50 kDaprotein F1 gene, complete cds. ).
Length = 463
Score = 142 bits (345), Expect = 2e-34
Identities = 69/79 (87%), Positives = 73/79 (92%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
I EKV RR+GK+TE NPK IKSGDAAIV LVPSKPLCVE+FQEFPPLGRFAVRDMRQTVA
Sbjct: 375 ILEKVDRRSGKTTEENPKFIKSGDAAIVNLVPSKPLCVEAFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIKAVNFK+A GGKVTK
Sbjct: 435 VGVIKAVNFKDASGGKVTK 453
>BT015202-1|AAT94431.1| 462|Drosophila melanogaster RE68984p
protein.
Length = 462
Score = 140 bits (340), Expect = 7e-34
Identities = 67/79 (84%), Positives = 71/79 (89%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEK RRTGK+TE PK+IKSGDAAI+ LVPSKPLCVESFQEFPPLGRFAVRDMRQTVA
Sbjct: 375 IKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIK+VNFKE GKVTK
Sbjct: 435 VGVIKSVNFKETTSGKVTK 453
>AE014297-4793|AAS65236.1| 462|Drosophila melanogaster CG1873-PD,
isoform D protein.
Length = 462
Score = 140 bits (340), Expect = 7e-34
Identities = 67/79 (84%), Positives = 71/79 (89%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEK RRTGK+TE PK+IKSGDAAI+ LVPSKPLCVESFQEFPPLGRFAVRDMRQTVA
Sbjct: 375 IKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIK+VNFKE GKVTK
Sbjct: 435 VGVIKSVNFKETTSGKVTK 453
>AE014297-4792|AAS65235.1| 462|Drosophila melanogaster CG1873-PC,
isoform C protein.
Length = 462
Score = 140 bits (340), Expect = 7e-34
Identities = 67/79 (84%), Positives = 71/79 (89%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEK RRTGK+TE PK+IKSGDAAI+ LVPSKPLCVESFQEFPPLGRFAVRDMRQTVA
Sbjct: 375 IKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIK+VNFKE GKVTK
Sbjct: 435 VGVIKSVNFKETTSGKVTK 453
>AE014297-4791|AAN14285.1| 462|Drosophila melanogaster CG1873-PB,
isoform B protein.
Length = 462
Score = 140 bits (340), Expect = 7e-34
Identities = 67/79 (84%), Positives = 71/79 (89%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEK RRTGK+TE PK+IKSGDAAI+ LVPSKPLCVESFQEFPPLGRFAVRDMRQTVA
Sbjct: 375 IKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIK+VNFKE GKVTK
Sbjct: 435 VGVIKSVNFKETTSGKVTK 453
>AE014297-4790|AAF57185.1| 462|Drosophila melanogaster CG1873-PA,
isoform A protein.
Length = 462
Score = 140 bits (340), Expect = 7e-34
Identities = 67/79 (84%), Positives = 71/79 (89%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEK RRTGK+TE PK+IKSGDAAI+ LVPSKPLCVESFQEFPPLGRFAVRDMRQTVA
Sbjct: 375 IKEKCDRRTGKTTETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIK+VNFKE GKVTK
Sbjct: 435 VGVIKSVNFKETTSGKVTK 453
>X06870-1|CAA29994.1| 462|Drosophila melanogaster EF-1-alpha
protein.
Length = 462
Score = 136 bits (330), Expect = 1e-32
Identities = 66/79 (83%), Positives = 70/79 (88%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEK RRTG +TE PK+IKSGDAAI+ LVPSKPLCVESFQEFPPLGRFAVRDMRQTVA
Sbjct: 375 IKEKYDRRTGGTTEDGPKAIKSGDAAIIVLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIK+VNFKE GKVTK
Sbjct: 435 VGVIKSVNFKETTSGKVTK 453
>U88868-1|AAC24943.1| 619|Drosophila melanogaster elongation factor
1 alpha-likefactor protein.
Length = 619
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -2
Query: 486 VXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-V 310
V +++G ++ P+ +K AI+ + S +C+E F+ FP +GRF +RD +T+A+G V
Sbjct: 555 VDKKSGDKSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKV 614
Query: 309 IKAV 298
+K V
Sbjct: 615 LKVV 618
>AY070979-1|AAL48601.1| 619|Drosophila melanogaster RE07731p
protein.
Length = 619
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -2
Query: 486 VXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-V 310
V +++G ++ P+ +K AI+ + S +C+E F+ FP +GRF +RD +T+A+G V
Sbjct: 555 VDKKSGDKSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKV 614
Query: 309 IKAV 298
+K V
Sbjct: 615 LKVV 618
>AE014134-2205|AAF53194.1| 619|Drosophila melanogaster CG6382-PA
protein.
Length = 619
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Frame = -2
Query: 486 VXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVG-V 310
V +++G ++ P+ +K AI+ + S +C+E F+ FP +GRF +RD +T+A+G V
Sbjct: 555 VDKKSGDKSKTRPRFVKQDQVAIMRIECSGMICLEQFKLFPQMGRFTLRDENKTIAIGKV 614
Query: 309 IKAV 298
+K V
Sbjct: 615 LKVV 618
>BT003766-1|AAO41445.1| 670|Drosophila melanogaster RE29053p
protein.
Length = 670
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = -2
Query: 486 VXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 307
+ + TG+ + P+ + + A+V L S+P+C+E + +F LGR +R T+A G++
Sbjct: 607 IHKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMV 666
Query: 306 KAV 298
+
Sbjct: 667 TKI 669
>AY060736-1|AAL28284.1| 194|Drosophila melanogaster GH18819p
protein.
Length = 194
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = -2
Query: 486 VXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 307
+ + TG+ + P+ + + A+V L S+P+C+E + +F LGR +R T+A G++
Sbjct: 131 IHKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMV 190
Query: 306 KAV 298
+
Sbjct: 191 TKI 193
>AE014296-376|AAF47584.2| 670|Drosophila melanogaster CG1898-PA
protein.
Length = 670
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = -2
Query: 486 VXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVAVGVI 307
+ + TG+ + P+ + + A+V L S+P+C+E + +F LGR +R T+A G++
Sbjct: 607 IHKSTGEVVKKKPRCLGNNSCALVELETSRPICIERYADFKELGRVMLRVAGVTIAAGMV 666
Query: 306 KAV 298
+
Sbjct: 667 TKI 669
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,577,656
Number of Sequences: 53049
Number of extensions: 361119
Number of successful extensions: 829
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1763278080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -