Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0090.Seq
(499 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 134 6e-34
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 130 8e-33
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 56 2e-10
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.0
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.0
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.0
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 1.3
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 5.4
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 5.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.1
AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced prot... 21 9.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 134 bits (323), Expect = 6e-34
Identities = 66/79 (83%), Positives = 70/79 (88%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEK RR GK+TE NPKSIKSGDAAIV LVPSKP+C E+FQEFPPLGRFAVRDMRQTVA
Sbjct: 375 IKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAEAFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIKAV FK+A GKVTK
Sbjct: 435 VGVIKAVTFKDA-AGKVTK 452
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 130 bits (314), Expect = 8e-33
Identities = 64/79 (81%), Positives = 70/79 (88%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSKPLCVESFQEFPPLGRFAVRDMRQTVA 319
IKEK RRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+FQEFPPLGRFAVRDMRQTVA
Sbjct: 375 IKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEAFQEFPPLGRFAVRDMRQTVA 434
Query: 318 VGVIKAVNFKEAGGGKVTK 262
VGVIK+V FK+ GKVTK
Sbjct: 435 VGVIKSVTFKDT-QGKVTK 452
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 56.0 bits (129), Expect = 2e-10
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = -2
Query: 498 IKEKVXRRTGKSTEVNPKSIKSGDAAIVXLVPSK 397
IKEK RRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 86 IKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 186 KYRSCMKNCAVNSSSYFLPLVAF 254
K+ C+KN A SSYF+ + F
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYF 116
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 186 KYRSCMKNCAVNSSSYFLPLVAF 254
K+ C+KN A SSYF+ + F
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYF 121
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 23.8 bits (49), Expect = 1.0
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 186 KYRSCMKNCAVNSSSYFLPLVAF 254
K+ C+KN A SSYF+ + F
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYF 121
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 1.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 147 CSPFFLRNTFR*MKYRSCMKN 209
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.4 bits (43), Expect = 5.4
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -2
Query: 453 NPKSIKSGDAAIVXLVPSKPLC 388
NP+ G +V L PS P C
Sbjct: 66 NPEHKPPGPKDLVYLEPSPPFC 87
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.4 bits (43), Expect = 5.4
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = -2
Query: 453 NPKSIKSGDAAIVXLVPSKPLC 388
NP+ G +V L PS P C
Sbjct: 67 NPEHKPPGPKDLVYLEPSPPFC 88
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 7.1
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = -3
Query: 431 EMQPLSXWYLPSL 393
+ P+ WY+PSL
Sbjct: 589 DKNPVQLWYVPSL 601
>AB264335-1|BAF44090.1| 87|Apis mellifera ecdysone-induced protein
75 protein.
Length = 87
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +3
Query: 156 FFLRNTFR*MKYRSCMKN 209
FF R+ + ++YR C KN
Sbjct: 41 FFRRSIQQKIQYRPCTKN 58
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,509
Number of Sequences: 438
Number of extensions: 2480
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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