Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0089.Seq
(399 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U67955-1|AAB07585.1| 140|Caenorhabditis elegans Galectin protei... 37 0.005
AB038500-1|BAB11965.1| 140|Caenorhabditis elegans galectin LEC-... 37 0.005
Z48638-2|CAC42392.1| 285|Caenorhabditis elegans Hypothetical pr... 36 0.014
Z48638-1|CAA88570.2| 297|Caenorhabditis elegans Hypothetical pr... 36 0.014
AB038504-1|BAB11969.1| 297|Caenorhabditis elegans galectin LEC-... 36 0.014
Z81539-2|CAB04390.1| 221|Caenorhabditis elegans Hypothetical pr... 34 0.043
Z66512-6|CAC70097.1| 278|Caenorhabditis elegans Hypothetical pr... 33 0.057
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 33 0.057
AB038503-1|BAB11968.1| 278|Caenorhabditis elegans galectin LEC-... 33 0.057
Z48638-4|CAD57721.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.100
Z48638-3|CAD57720.1| 221|Caenorhabditis elegans Hypothetical pr... 33 0.100
Z82081-7|CAB04960.1| 285|Caenorhabditis elegans Hypothetical pr... 32 0.13
Z82081-6|CAB04959.1| 279|Caenorhabditis elegans Hypothetical pr... 32 0.13
Z49067-2|CAA88850.1| 283|Caenorhabditis elegans Hypothetical pr... 32 0.13
M94671-1|AAB87718.1| 279|Caenorhabditis elegans beta-galactosid... 32 0.13
AB000802-1|BAA22942.1| 279|Caenorhabditis elegans 32-kDa galect... 32 0.13
AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical ... 31 0.23
AB038505-1|BAB11970.1| 283|Caenorhabditis elegans galectin LEC-... 31 0.30
Z81583-7|CAB04668.1| 268|Caenorhabditis elegans Hypothetical pr... 30 0.53
Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical pr... 29 1.2
U29244-17|AAC71097.2| 314|Caenorhabditis elegans Galectin prote... 29 1.2
D63575-1|BAA09794.1| 146|Caenorhabditis elegans galectin protein. 29 1.2
AC024821-3|AAF60785.1| 146|Caenorhabditis elegans Galectin prot... 29 1.2
AB038506-1|BAB11971.1| 314|Caenorhabditis elegans galectin LEC-... 29 1.2
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 29 1.6
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 27 3.7
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 27 5.0
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z68217-6|CAE17833.1| 198|Caenorhabditis elegans Hypothetical pr... 27 6.5
AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily a... 27 6.5
U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical pr... 26 8.7
>U67955-1|AAB07585.1| 140|Caenorhabditis elegans Galectin protein 9
protein.
Length = 140
Score = 37.1 bits (82), Expect = 0.005
Identities = 25/64 (39%), Positives = 33/64 (51%)
Frame = +3
Query: 48 MAVPXIYNPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHL 227
MA P I NP +P +P G+ G + + G V + F +NL G N IALH+
Sbjct: 1 MAAP-ILNPSVPGTFALPFGVRSGLQIAVNGLVKH-KKDFVVNLISGGN------IALHV 52
Query: 228 NFRF 239
NFRF
Sbjct: 53 NFRF 56
>AB038500-1|BAB11965.1| 140|Caenorhabditis elegans galectin LEC-9
protein.
Length = 140
Score = 37.1 bits (82), Expect = 0.005
Identities = 25/64 (39%), Positives = 33/64 (51%)
Frame = +3
Query: 48 MAVPXIYNPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHL 227
MA P I NP +P +P G+ G + + G V + F +NL G N IALH+
Sbjct: 1 MAAP-ILNPSVPGTFALPFGVRSGLQIAVNGLVKH-KKDFVVNLISGGN------IALHV 52
Query: 228 NFRF 239
NFRF
Sbjct: 53 NFRF 56
>Z48638-2|CAC42392.1| 285|Caenorhabditis elegans Hypothetical
protein ZK892.1b protein.
Length = 285
Score = 35.5 bits (78), Expect = 0.014
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 48 MAVPXIYNPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHL 227
MA P +N IP + + PG+ L I+G+ ++RF INL +D+ LHL
Sbjct: 1 MAEPKSFN--IPYRSKLTERIEPGQTLIIRGKTIDESKRFNINLHKDSPDFSGNDVPLHL 58
Query: 228 NFRFVE 245
+ RF E
Sbjct: 59 SIRFDE 64
Score = 31.5 bits (68), Expect = 0.23
Identities = 20/50 (40%), Positives = 25/50 (50%)
Frame = +3
Query: 105 GMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVEMCV 254
G+ PG+ L + G A++F INL DIALH N RF E V
Sbjct: 158 GLVPGKTLVVYGTPEKKAKKFNINL-----LKKNGDIALHFNPRFDEKSV 202
>Z48638-1|CAA88570.2| 297|Caenorhabditis elegans Hypothetical
protein ZK892.1a protein.
Length = 297
Score = 35.5 bits (78), Expect = 0.014
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 48 MAVPXIYNPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHL 227
MA P +N IP + + PG+ L I+G+ ++RF INL +D+ LHL
Sbjct: 1 MAEPKSFN--IPYRSKLTERIEPGQTLIIRGKTIDESKRFNINLHKDSPDFSGNDVPLHL 58
Query: 228 NFRFVE 245
+ RF E
Sbjct: 59 SIRFDE 64
Score = 30.7 bits (66), Expect = 0.40
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 105 GMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
G+ PG+ L + G A++F INL DIALH N RF E
Sbjct: 158 GLVPGKTLVVYGTPEKKAKKFNINL-----LKKNGDIALHFNPRFDE 199
>AB038504-1|BAB11969.1| 297|Caenorhabditis elegans galectin LEC-3
protein.
Length = 297
Score = 35.5 bits (78), Expect = 0.014
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 48 MAVPXIYNPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHL 227
MA P +N IP + + PG+ L I+G+ ++RF INL +D+ LHL
Sbjct: 1 MAEPKSFN--IPYRSKLTERIEPGQTLIIRGKTIDESKRFNINLHKDSPDFSGNDVPLHL 58
Query: 228 NFRFVE 245
+ RF E
Sbjct: 59 SIRFDE 64
Score = 30.7 bits (66), Expect = 0.40
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 105 GMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
G+ PG+ L + G A++F INL DIALH N RF E
Sbjct: 158 GLVPGKTLVVYGTPEKKAKKFNINL-----LKKNGDIALHFNPRFDE 199
>Z81539-2|CAB04390.1| 221|Caenorhabditis elegans Hypothetical
protein F46A8.4 protein.
Length = 221
Score = 33.9 bits (74), Expect = 0.043
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 233 PLRGDVRLRNHLSXMSWGAEETXGGMPXHANGETFXALVLXEPRALKVALNGVHF 397
P +G V R + +W ET GG P A G F ++ +P +++ +NGV+F
Sbjct: 127 PTKGLVA-RTRFTNGAWEVGETYGGNPFRA-GAQFNVTMVNQPTHIEIHVNGVYF 179
>Z66512-6|CAC70097.1| 278|Caenorhabditis elegans Hypothetical
protein F52H3.7b protein.
Length = 278
Score = 33.5 bits (73), Expect = 0.057
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 66 YNPVIPCVHPIPG-GMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFV 242
Y PV P + G G+ PG+ L + G A+RF INL DIALHLN RF
Sbjct: 145 YYPV-PYESGLAGEGLAPGKTLTVFGIPEKKAKRFHINL-----LKKNGDIALHLNARFD 198
Query: 243 E 245
E
Sbjct: 199 E 199
Score = 31.9 bits (69), Expect = 0.17
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 254 LRNHLSXMSWGAEETXGGMPXHANGETFXALVLXEPRALKVALNGVHF 397
+RN L +WG EE G MP F + EP A V +NG F
Sbjct: 203 VRNSLINSAWGNEEREGKMPFE-KAVGFDLEIHNEPYAFAVTVNGERF 249
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 114 PGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
PG+ L ++G+ + RF +NL +D+ LH++ RF E
Sbjct: 21 PGQTLIVKGKTGEDSIRFTVNLHTNTADFSGNDVPLHVSVRFDE 64
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical protein
F52H3.7a protein.
Length = 1245
Score = 33.5 bits (73), Expect = 0.057
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 66 YNPVIPCVHPIPG-GMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFV 242
Y PV P + G G+ PG+ L + G A+RF INL DIALHLN RF
Sbjct: 1112 YYPV-PYESGLAGEGLAPGKTLTVFGIPEKKAKRFHINL-----LKKNGDIALHLNARFD 1165
Query: 243 E 245
E
Sbjct: 1166 E 1166
Score = 31.9 bits (69), Expect = 0.17
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 254 LRNHLSXMSWGAEETXGGMPXHANGETFXALVLXEPRALKVALNGVHF 397
+RN L +WG EE G MP F + EP A V +NG F
Sbjct: 1170 VRNSLINSAWGNEEREGKMPFE-KAVGFDLEIHNEPYAFAVTVNGERF 1216
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 114 PGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
PG+ L ++G+ + RF +NL +D+ LH++ RF E
Sbjct: 988 PGQTLIVKGKTGEDSIRFTVNLHTNTADFSGNDVPLHVSVRFDE 1031
>AB038503-1|BAB11968.1| 278|Caenorhabditis elegans galectin LEC-2
protein.
Length = 278
Score = 33.5 bits (73), Expect = 0.057
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 66 YNPVIPCVHPIPG-GMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFV 242
Y PV P + G G+ PG+ L + G A+RF INL DIALHLN RF
Sbjct: 145 YYPV-PYESGLAGEGLAPGKTLTVFGIPEKKAKRFHINL-----LKKNGDIALHLNARFD 198
Query: 243 E 245
E
Sbjct: 199 E 199
Score = 31.9 bits (69), Expect = 0.17
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +2
Query: 254 LRNHLSXMSWGAEETXGGMPXHANGETFXALVLXEPRALKVALNGVHF 397
+RN L +WG EE G MP F + EP A V +NG F
Sbjct: 203 VRNSLINSAWGNEEREGKMPFE-KAVGFDLEIHNEPYAFAVTVNGERF 249
Score = 31.5 bits (68), Expect = 0.23
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 114 PGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
PG+ L ++G+ + RF +NL +D+ LH++ RF E
Sbjct: 21 PGQTLIVKGKTGEDSIRFTVNLHTNTADFSGNDVPLHVSVRFDE 64
>Z48638-4|CAD57721.1| 312|Caenorhabditis elegans Hypothetical
protein ZK892.1d protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.100
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 114 PGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
PG+ L I+G+ ++RF INL +D+ LHL+ RF E
Sbjct: 25 PGQTLIIRGKTIDESKRFNINLHKDSPDFSGNDVPLHLSIRFDE 68
Score = 30.7 bits (66), Expect = 0.40
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 105 GMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
G+ PG+ L + G A++F INL DIALH N RF E
Sbjct: 162 GLVPGKTLVVYGTPEKKAKKFNINL-----LKKNGDIALHFNPRFDE 203
>Z48638-3|CAD57720.1| 221|Caenorhabditis elegans Hypothetical
protein ZK892.1c protein.
Length = 221
Score = 32.7 bits (71), Expect = 0.100
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 114 PGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
PG+ L I+G+ ++RF INL +D+ LHL+ RF E
Sbjct: 25 PGQTLIIRGKTIDESKRFNINLHKDSPDFSGNDVPLHLSIRFDE 68
Score = 30.7 bits (66), Expect = 0.40
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 105 GMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
G+ PG+ L + G A++F INL DIALH N RF E
Sbjct: 162 GLVPGKTLVVYGTPEKKAKKFNINL-----LKKNGDIALHFNPRFDE 203
>Z82081-7|CAB04960.1| 285|Caenorhabditis elegans Hypothetical
protein W09H1.6b protein.
Length = 285
Score = 32.3 bits (70), Expect = 0.13
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 114 PGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
PG+ L ++G +QRF INL +D+ LH++ RF E
Sbjct: 29 PGQTLIVKGSTIDESQRFTINLHSKTADFSGNDVPLHVSVRFDE 72
Score = 29.9 bits (64), Expect = 0.70
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 254 LRNHLSXMSWGAEETXGGMPXHANGETFXALVLXEPRALKVALNGVHF 397
+RN L+ WG EE G P G F ++ E A +V +NG +
Sbjct: 210 IRNSLAANEWGNEEREGKNPFE-KGVGFDLVIQNEEYAFQVFVNGERY 256
Score = 28.3 bits (60), Expect = 2.1
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +3
Query: 66 YNPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
Y PV P + G+ G+ L + G V A+RF +NL DI+ H N RF E
Sbjct: 153 YYPV-PYESGLANGLPVGKSLLVFGTVEKKAKRFHVNL-----LRKNGDISFHFNPRFDE 206
>Z82081-6|CAB04959.1| 279|Caenorhabditis elegans Hypothetical
protein W09H1.6a protein.
Length = 279
Score = 32.3 bits (70), Expect = 0.13
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 114 PGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
PG+ L ++G +QRF INL +D+ LH++ RF E
Sbjct: 23 PGQTLIVKGSTIDESQRFTINLHSKTADFSGNDVPLHVSVRFDE 66
Score = 29.9 bits (64), Expect = 0.70
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 254 LRNHLSXMSWGAEETXGGMPXHANGETFXALVLXEPRALKVALNGVHF 397
+RN L+ WG EE G P G F ++ E A +V +NG +
Sbjct: 204 IRNSLAANEWGNEEREGKNPFE-KGVGFDLVIQNEEYAFQVFVNGERY 250
Score = 28.3 bits (60), Expect = 2.1
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +3
Query: 66 YNPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
Y PV P + G+ G+ L + G V A+RF +NL DI+ H N RF E
Sbjct: 147 YYPV-PYESGLANGLPVGKSLLVFGTVEKKAKRFHVNL-----LRKNGDISFHFNPRFDE 200
>Z49067-2|CAA88850.1| 283|Caenorhabditis elegans Hypothetical
protein C44F1.3 protein.
Length = 283
Score = 32.3 bits (70), Expect = 0.13
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 117 GRMLRIQGRVPPGAQRFAIN-LQCGPNTDPRDDIALHLNFRFVE 245
G+ L + G++ GAQ IN LQ G P + LHL F E
Sbjct: 25 GQTLNVHGKINEGAQVAEINLLQGGGEIGPNTQVILHLKLNFKE 68
>M94671-1|AAB87718.1| 279|Caenorhabditis elegans beta-galactoside
binding protein protein.
Length = 279
Score = 32.3 bits (70), Expect = 0.13
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 114 PGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
PG+ L ++G +QRF INL +D+ LH++ RF E
Sbjct: 23 PGQTLIVKGSTIDESQRFTINLHSKTADFSGNDVPLHVSVRFDE 66
Score = 29.9 bits (64), Expect = 0.70
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 254 LRNHLSXMSWGAEETXGGMPXHANGETFXALVLXEPRALKVALNGVHF 397
+RN L+ WG EE G P G F ++ E A +V +NG +
Sbjct: 204 IRNSLAANEWGNEEREGKNPFE-KGVGFDLVIQNEEYAFQVFVNGERY 250
Score = 28.3 bits (60), Expect = 2.1
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +3
Query: 66 YNPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
Y PV P + G+ G+ L + G V A+RF +NL DI+ H N RF E
Sbjct: 147 YYPV-PYESGLANGLPVGKSLLVFGTVEKKAKRFHVNL-----LRKNGDISFHFNPRFDE 200
>AB000802-1|BAA22942.1| 279|Caenorhabditis elegans 32-kDa galectin
protein.
Length = 279
Score = 32.3 bits (70), Expect = 0.13
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +3
Query: 114 PGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
PG+ L ++G +QRF INL +D+ LH++ RF E
Sbjct: 23 PGQTLIVKGSTIDESQRFTINLHSKTADFSGNDVPLHVSVRFDE 66
Score = 29.9 bits (64), Expect = 0.70
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 254 LRNHLSXMSWGAEETXGGMPXHANGETFXALVLXEPRALKVALNGVHF 397
+RN L+ WG EE G P G F ++ E A +V +NG +
Sbjct: 204 IRNSLAANEWGNEEREGKNPFE-KGVGFDLVIQNEEYAFQVFVNGERY 250
Score = 28.3 bits (60), Expect = 2.1
Identities = 21/60 (35%), Positives = 28/60 (46%)
Frame = +3
Query: 66 YNPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
Y PV P + G+ G+ L + G V A+RF +NL DI+ H N RF E
Sbjct: 147 YYPV-PYESGLANGLPVGKSLLVFGTVEKKAKRFHVNL-----LRKNGDISFHFNPRFDE 200
>AC024200-6|AAF35998.1| 314|Caenorhabditis elegans Hypothetical
protein Y71F9AL.9 protein.
Length = 314
Score = 31.5 bits (68), Expect = 0.23
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = +2
Query: 32 RKKNKNGSTXDIQPGDTVRAPHPGRHVPRAHAPHPGQSAARRTEVRDQPAV 184
+KKNK+ T P T AP P + P P S+ ++ +P V
Sbjct: 73 KKKNKSKKTETAAPETTQSAPAPAKAAPAPTVAAPASSSVTKSAAAPKPVV 123
>AB038505-1|BAB11970.1| 283|Caenorhabditis elegans galectin LEC-4
protein.
Length = 283
Score = 31.1 bits (67), Expect = 0.30
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 117 GRMLRIQGRVPPGAQRFAIN-LQCGPNTDPRDDIALHLNFRFVE 245
G L + G++ GAQ IN LQ G P + LHL F E
Sbjct: 25 GLTLNVHGKINEGAQVAEINLLQGGGEIGPNTQVILHLKLNFKE 68
>Z81583-7|CAB04668.1| 268|Caenorhabditis elegans Hypothetical
protein T02G6.7 protein.
Length = 268
Score = 30.3 bits (65), Expect = 0.53
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +2
Query: 281 WGAEETXGGMPXHANGETFXALVLXEPRALKVALNGVHF 397
WGA E GG P N + F ++ + AL++ +N V F
Sbjct: 199 WGASEEDGGWPFTPNSQ-FNMTIVNQVAALQIHINQVFF 236
>Z72518-2|CAA96700.1| 613|Caenorhabditis elegans Hypothetical
protein ZC374.2 protein.
Length = 613
Score = 29.1 bits (62), Expect = 1.2
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 83 VRAPHPGRHVPRAHAPHPGQSAARRTEVRDQPAVRTQHGPAGRHRAAPQLPL 238
V+AP P H PHP Q ++T V QP QH G H+ Q P+
Sbjct: 132 VQAPAPAHHANHHVHPHPHQ---QQTPV--QPQTHGQHS-QGHHQVPAQSPI 177
>U29244-17|AAC71097.2| 314|Caenorhabditis elegans Galectin protein
5 protein.
Length = 314
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 254 LRNHLSXMSWGAEETXGGMPXHANGETFXALVLXEPRALKVALNGVHF 397
+RN ++ WG EE G MP + F ++ E + ++ LN F
Sbjct: 234 VRNAMTSNVWGKEEREGKMPLDKK-QVFDITIINEEYSFQIFLNNERF 280
>D63575-1|BAA09794.1| 146|Caenorhabditis elegans galectin protein.
Length = 146
Score = 29.1 bits (62), Expect = 1.2
Identities = 23/69 (33%), Positives = 30/69 (43%)
Frame = +3
Query: 66 YNPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
+NP P P+ G G LR+ RF INL+ DDI LH N RF E
Sbjct: 15 FNPQTPVNIPVQG-FSNGARLRLVLLPTSADSRFHINLRTP------DDIVLHFNARFDE 67
Query: 246 MCVCGTTSA 272
V +++
Sbjct: 68 GAVVNNSTS 76
>AC024821-3|AAF60785.1| 146|Caenorhabditis elegans Galectin protein
6 protein.
Length = 146
Score = 29.1 bits (62), Expect = 1.2
Identities = 23/69 (33%), Positives = 30/69 (43%)
Frame = +3
Query: 66 YNPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAINLQCGPNTDPRDDIALHLNFRFVE 245
+NP P P+ G G LR+ RF INL+ DDI LH N RF E
Sbjct: 15 FNPQTPVNIPVQG-FSNGARLRLVLLPTSADSRFHINLRTP------DDIVLHFNARFDE 67
Query: 246 MCVCGTTSA 272
V +++
Sbjct: 68 GAVVNNSTS 76
>AB038506-1|BAB11971.1| 314|Caenorhabditis elegans galectin LEC-5
protein.
Length = 314
Score = 29.1 bits (62), Expect = 1.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 254 LRNHLSXMSWGAEETXGGMPXHANGETFXALVLXEPRALKVALNGVHF 397
+RN ++ WG EE G MP + F ++ E + ++ LN F
Sbjct: 234 VRNAMTSNVWGKEEREGKMPLDKK-QVFDITIINEEYSFQIFLNNERF 280
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 28.7 bits (61), Expect = 1.6
Identities = 25/78 (32%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Frame = +2
Query: 5 KARPN-V*NSRKKNKNGSTXDIQPGDTVRAPHPGRHVPRAHAPHPGQSAARRTEVRDQPA 181
+ARP + + N+ T +P DT HP P A PH A R P
Sbjct: 393 QARPGMIGGAANNNRARPTHVTRPMDTQEFEHPV--APAAAPPHRVVDVAPH---RMTPE 447
Query: 182 VRTQHGPAGRHRAAPQLP 235
R + R RAAPQ P
Sbjct: 448 QRQELQQMNRQRAAPQFP 465
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 27.5 bits (58), Expect = 3.7
Identities = 9/17 (52%), Positives = 10/17 (58%)
Frame = +2
Query: 89 APHPGRHVPRAHAPHPG 139
+PH G H AH HPG
Sbjct: 75 SPHHGHHTHHAHGAHPG 91
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 27.1 bits (57), Expect = 5.0
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 68 QPGDTVRAPH-PGRHVPRAHAPHPGQS--AARRTEVRDQPAVRTQHGP 202
QP + PH P + +PR AP P Q+ +A + V Q +V+ P
Sbjct: 546 QPHQPNQQPHIPSQQLPRQQAPQPAQNRPSAAQQVVFQQGSVQATTAP 593
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 26.6 bits (56), Expect = 6.5
Identities = 17/67 (25%), Positives = 24/67 (35%)
Frame = +2
Query: 5 KARPNV*NSRKKNKNGSTXDIQPGDTVRAPHPGRHVPRAHAPHPGQSAARRTEVRDQPAV 184
K PN ++ K N + GD P+P P P G A + + D A
Sbjct: 86 KPGPNAGDTTKPNSQSGDPKPRGGDPAGKPNPPAGDPSKTKPQGGDPAKPKPQTGDPYAT 145
Query: 185 RTQHGPA 205
+ PA
Sbjct: 146 NSTVKPA 152
>Z68217-6|CAE17833.1| 198|Caenorhabditis elegans Hypothetical
protein F58G6.8 protein.
Length = 198
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +2
Query: 248 VRLRNHLSXMSWGAEETXGGMPXHANGETFXALVL 352
++ +NHL +WG T G+P A T A+++
Sbjct: 87 IQFKNHLK--NWGETATIHGVPHMAQAHTVIAIIV 119
>AC024857-1|AAK31566.2| 869|Caenorhabditis elegans Temporarily
assigned gene nameprotein 305 protein.
Length = 869
Score = 26.6 bits (56), Expect = 6.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 138 GRVPPGAQRFAINLQCGPNTDPRDDIALH 224
G+ PP A I+L C P+T D + H
Sbjct: 603 GKPPPPAAASTISLPCQPSTSKEPDSSAH 631
>U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical
protein T10E10.4 protein.
Length = 966
Score = 26.2 bits (55), Expect = 8.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 163 LCAPGGTLPWMRSMRPGYMPPGMGCT 86
LC GG MR R PPG GCT
Sbjct: 677 LCPNGGRAS-MRCYRGAECPPGYGCT 701
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.126 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,073,374
Number of Sequences: 27780
Number of extensions: 174870
Number of successful extensions: 606
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 551
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 619699724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -