Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0089.Seq
(399 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor... 25 0.24
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 1.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 1.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 2.2
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 22 3.0
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 22 3.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 3.0
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 5.2
DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor pro... 21 5.2
DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor pro... 21 5.2
AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled rec... 21 5.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 6.9
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 20 9.1
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 20 9.1
>U15956-1|AAA67444.1| 129|Apis mellifera hymenoptaecin precursor
protein.
Length = 129
Score = 25.4 bits (53), Expect = 0.24
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 3/86 (3%)
Frame = +2
Query: 5 KARPNV*NSRKK---NKNGSTXDIQPGDTVRAPHPGRHVPRAHAPHPGQSAARRTEVRDQ 175
K+RP++ K+ +KNG T D G +R P R HA + ++ Q
Sbjct: 51 KSRPSLDIDYKQRVYDKNGMTGDAYGGLNIRPGQPSRQ----HAGFEFGKEYKNGFIKGQ 106
Query: 176 PAVRTQHGPAGRHRAAPQLPLRGDVR 253
V Q GP G R +P + G R
Sbjct: 107 SEV--QRGPGG--RLSPYFGINGGFR 128
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 23.0 bits (47), Expect = 1.3
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 95 HPGRHVPRAHAPHPGQS 145
HP +H P + PH G S
Sbjct: 317 HPHQHHPSQYHPHRGSS 333
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 1.7
Identities = 9/34 (26%), Positives = 15/34 (44%)
Frame = -1
Query: 360 GSXSTSAXKVSPLACXGIPPXVSSAPQLMXLRWF 259
G+ TS +C +PP + + M + WF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWF 118
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 2.2
Identities = 9/34 (26%), Positives = 15/34 (44%)
Frame = -1
Query: 360 GSXSTSAXKVSPLACXGIPPXVSSAPQLMXLRWF 259
G+ TS +C +PP + + M + WF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWF 118
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 90 HPIPGGMYPGRMLR 131
HPIP G YP R
Sbjct: 288 HPIPTGYYPTMRFR 301
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.8 bits (44), Expect = 3.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +3
Query: 90 HPIPGGMYPGRMLR 131
HPIP G YP R
Sbjct: 288 HPIPTGYYPTMRFR 301
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 21.8 bits (44), Expect = 3.0
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +3
Query: 69 NPVIPCVHPIPGGMYPGRMLRIQGRVPPGAQRFAINLQCGPNTD 200
N C G+ P L+ + RVPPG + N +C + D
Sbjct: 441 NSKTKCCFAQDDGLCP-YTLKHKIRVPPGTPIYECNKRCNCDID 483
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/34 (23%), Positives = 15/34 (44%)
Frame = -1
Query: 360 GSXSTSAXKVSPLACXGIPPXVSSAPQLMXLRWF 259
G+ TS +C +PP + + + + WF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWF 118
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/34 (23%), Positives = 15/34 (44%)
Frame = -1
Query: 360 GSXSTSAXKVSPLACXGIPPXVSSAPQLMXLRWF 259
G+ TS +C +PP + + + + WF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWF 118
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 5.2
Identities = 8/34 (23%), Positives = 15/34 (44%)
Frame = -1
Query: 360 GSXSTSAXKVSPLACXGIPPXVSSAPQLMXLRWF 259
G+ TS +C +PP + + + + WF
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWF 118
>DQ863218-1|ABI94394.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +2
Query: 5 KARPNV*NSRKKNKNGSTXDIQPGDTVRAPHPGRHVPRAHA 127
+AR + N+ + ++ D + + H R PR+HA
Sbjct: 230 RARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSHA 270
>DQ863217-1|ABI94393.1| 399|Apis mellifera tyramine receptor
protein.
Length = 399
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +2
Query: 5 KARPNV*NSRKKNKNGSTXDIQPGDTVRAPHPGRHVPRAHA 127
+AR + N+ + ++ D + + H R PR+HA
Sbjct: 230 RARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSHA 270
>AJ245824-1|CAB76374.1| 399|Apis mellifera G-protein coupled
receptor protein.
Length = 399
Score = 21.0 bits (42), Expect = 5.2
Identities = 10/41 (24%), Positives = 19/41 (46%)
Frame = +2
Query: 5 KARPNV*NSRKKNKNGSTXDIQPGDTVRAPHPGRHVPRAHA 127
+AR + N+ + ++ D + + H R PR+HA
Sbjct: 230 RARQSRINAVQSTRHREADDAEESVSSETNHNERSTPRSHA 270
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 6.9
Identities = 8/34 (23%), Positives = 15/34 (44%)
Frame = -1
Query: 360 GSXSTSAXKVSPLACXGIPPXVSSAPQLMXLRWF 259
G+ TS +C +PP + + + + WF
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWF 118
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 20.6 bits (41), Expect = 6.9
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = -2
Query: 254 DAHLHEAEVEVQRDVVPRVRVGSALQVDREPLCAGRHSALD 132
+A L+ + +D+VP VR+G+ + D + G ++D
Sbjct: 147 EAMLYTLDKLNTQDIVPGVRIGAHILDDCDNDTYGLEMSVD 187
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 196 VLGPHCRLIANLCAPG 149
VLG C L + LC PG
Sbjct: 530 VLGWLCGLSSMLCIPG 545
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.2 bits (40), Expect = 9.1
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 196 VLGPHCRLIANLCAPG 149
VLG C L + LC PG
Sbjct: 583 VLGWLCGLSSMLCIPG 598
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.126 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,894
Number of Sequences: 438
Number of extensions: 1972
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 9885360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.3 bits)
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