Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0079.Seq
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    24   0.94 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    24   0.94 
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    24   1.2  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    23   2.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   2.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.2  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   3.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   3.8  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    21   6.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    21   6.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    21   6.6  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   8.7  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    21   8.7  

>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -1

Query: 432 NKKYFTNMFFVSIYLYSQYFEIYHQLKLSILS*LIHRHKEVNFLNRRTV 286
           N +YF     + I LY  YF++   + +S    L   H EV  +NR+T+
Sbjct: 205 NFEYFQRKILLMIQLYYLYFDV---IVISTFLQLFLEHYEV--INRQTL 248


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 16/49 (32%), Positives = 25/49 (51%)
 Frame = -1

Query: 432 NKKYFTNMFFVSIYLYSQYFEIYHQLKLSILS*LIHRHKEVNFLNRRTV 286
           N +YF     + I LY  YF++   + +S    L   H EV  +NR+T+
Sbjct: 131 NFEYFQRKILLMIQLYYLYFDV---IVISTFLQLFLEHYEV--INRQTL 174


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -2

Query: 440 NFIIKNTLQICFLFLYIYTLSILKFTTNLN*AFYHSLYI 324
           NF+ +    I  L++  YT+ I    +NLN +  HS ++
Sbjct: 166 NFVNEYVQAIEVLYICSYTVLIRNKISNLNTSLIHSTHL 204


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 158 KTTHVHSTQTKYMCRLSLLR 217
           K   +HS +  Y C+L LLR
Sbjct: 95  KHLRIHSGEKPYECKLCLLR 114


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 158 KTTHVHSTQTKYMCRLSLLR 217
           K   +HS +  Y C+L LLR
Sbjct: 351 KHLRIHSGEKPYECKLCLLR 370


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 194 CILFVLNEHVLFCLEFLLLPVNV 126
           CI +    H+LFC  F++  +++
Sbjct: 257 CIYYFYYMHLLFCCAFIIFTMHL 279



 Score = 21.8 bits (44), Expect = 5.0
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -2

Query: 194 CILFVLNEHVLFCLEFLLLPVNV 126
           C   +   H+LFC  F+   +++
Sbjct: 171 CAFIIFTMHLLFCCAFIFFNMHL 193


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 5/13 (38%), Positives = 12/13 (92%)
 Frame = -3

Query: 412 YVFCFYIFILSVF 374
           +VFC++I++ +V+
Sbjct: 145 FVFCYFIYLFTVY 157


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = +2

Query: 182 QTKYMCRLSLLRHINKVTSIVYDKVYHCNLYRYHITVLRFKKFTSLC 322
           Q  Y     L   I  V SI Y K +H N     I ++ FK+ +  C
Sbjct: 32  QKFYAVAFFLALSIGVVVSI-YSKSFHRNEIHIKIVLMFFKEASLYC 77


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
 Frame = +1

Query: 136 GNNKN--SKQNNTCSFNTN 186
           GNN N  S  NN  +FN N
Sbjct: 126 GNNNNTPSATNNNTNFNNN 144


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
 Frame = +1

Query: 136 GNNKN--SKQNNTCSFNTN 186
           GNN N  S  NN  +FN N
Sbjct: 74  GNNNNTPSATNNNTNFNNN 92


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/19 (52%), Positives = 11/19 (57%), Gaps = 2/19 (10%)
 Frame = +1

Query: 136 GNNKN--SKQNNTCSFNTN 186
           GNN N  S  NN  +FN N
Sbjct: 257 GNNNNTPSATNNNTNFNNN 275


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = -2

Query: 158 CLEFLLLPVNV 126
           CL+FLLL +N+
Sbjct: 69  CLDFLLLALNI 79


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/34 (32%), Positives = 18/34 (52%)
 Frame = -1

Query: 393 YLYSQYFEIYHQLKLSILS*LIHRHKEVNFLNRR 292
           + YS+Y  I  + +L+    L  R  ++ F NRR
Sbjct: 175 FYYSRYITIRRKAELANSLGLSERQVKIWFQNRR 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,162
Number of Sequences: 336
Number of extensions: 3580
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)