Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0078.Seq
(598 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n... 73 7e-12
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 40 0.044
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|... 36 0.72
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ... 35 1.7
UniRef50_Q81XZ5 Cluster: Prophage LambdaBa01, N-acetylmuramoyl-L... 34 2.9
UniRef50_A4FQV2 Cluster: Secreted trypsin-like serine protease; ... 33 3.9
UniRef50_UPI0000E4A253 Cluster: PREDICTED: similar to Vacuolar p... 33 6.7
UniRef50_Q9FPR2 Cluster: Lysine-rich arabinogalactan protein 18 ... 33 6.7
>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
Gallus gallus
Length = 103
Score = 72.5 bits (170), Expect = 7e-12
Identities = 40/68 (58%), Positives = 45/68 (66%)
Frame = -2
Query: 516 AHNATTSFLTATILVYXXXXXXXXXXXTRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSS 337
+ + TTSFLTA L+Y TRLALQ LVK FKV SF+L+GL RV Y YFSS
Sbjct: 36 SQDPTTSFLTAATLIYAIGAGITAAAGTRLALQWILVKGFKVDSFQLQGLERVLYCYFSS 95
Query: 336 LPPRAGSG 313
LPPR GSG
Sbjct: 96 LPPRVGSG 103
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 39.9 bits (89), Expect = 0.044
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -1
Query: 370 PRKSPVSLFFVTTSPCREW 314
PRKSPV LFFVTTSP REW
Sbjct: 24 PRKSPVLLFFVTTSPGREW 42
>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
tropicalis|Rep: Novel protein - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 118
Score = 35.9 bits (79), Expect = 0.72
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 173 MSALSTFDGSFCDYHG 220
MSALSTFDG+FC YHG
Sbjct: 1 MSALSTFDGTFCAYHG 16
>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 76
Score = 34.7 bits (76), Expect = 1.7
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -2
Query: 333 PPRAGSG*FARLLPSLDVVAVSQAPS 256
PP+ SG +RLL +D+VA+SQAPS
Sbjct: 46 PPKVSSGKVSRLLLPVDIVAISQAPS 71
Score = 34.3 bits (75), Expect = 2.2
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1
Query: 460 SWNYRGCWHQTCP 422
SWNYR CWHQT P
Sbjct: 7 SWNYRSCWHQTGP 19
>UniRef50_Q81XZ5 Cluster: Prophage LambdaBa01,
N-acetylmuramoyl-L-alanine amidase, family 2; n=9;
root|Rep: Prophage LambdaBa01,
N-acetylmuramoyl-L-alanine amidase, family 2 - Bacillus
anthracis
Length = 310
Score = 33.9 bits (74), Expect = 2.9
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 553 VSITADAVHRQRGAQCNYELFNRNNFSIRYWSWNYRGCWH 434
V+ITAD + ++G NY++ +Y SW YR W+
Sbjct: 254 VTITADVLRVRKGPGTNYDIVKNVYQGEQYQSWGYRDGWY 293
>UniRef50_A4FQV2 Cluster: Secreted trypsin-like serine protease;
n=1; Saccharopolyspora erythraea NRRL 2338|Rep: Secreted
trypsin-like serine protease - Saccharopolyspora
erythraea (strain NRRL 23338)
Length = 283
Score = 33.5 bits (73), Expect = 3.9
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = -1
Query: 457 WNYRGCWHQTCPPI--VPR*NI*SVLIPITRPRKSPVSLFFVTTSPCREWVICAPAAFLG 284
W + G W T PP +PR + ++ + RP P +L T + APA LG
Sbjct: 109 WKHPG-WQHTPPPPGELPRMHPDVAVVTLDRPMPFP-ALPLATVEDAALYRAGAPARILG 166
Query: 283 CGSRFSGSLSESNPDSPLPVTTMVVAETTI 194
G +P PLP T+ ++ + +
Sbjct: 167 WGVTDPDKTYPPDPGEPLPTTSRILQQAQL 196
>UniRef50_UPI0000E4A253 Cluster: PREDICTED: similar to Vacuolar
protein sorting protein 36 (ELL-associated protein of 45
kDa), partial; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Vacuolar protein sorting protein
36 (ELL-associated protein of 45 kDa), partial -
Strongylocentrotus purpuratus
Length = 349
Score = 32.7 bits (71), Expect = 6.7
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = -3
Query: 263 LPLGIEP*FPVTRDNHGSRRNYHRKLIRQTFERCVA 156
L LGI PVTR+ HGS YH +L +Q E +A
Sbjct: 183 LSLGIAN--PVTRETHGSGLKYHEELAKQLSEALIA 216
>UniRef50_Q9FPR2 Cluster: Lysine-rich arabinogalactan protein 18
precursor; n=3; Arabidopsis thaliana|Rep: Lysine-rich
arabinogalactan protein 18 precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 209
Score = 32.7 bits (71), Expect = 6.7
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -1
Query: 382 PITRPRKSPVSLFFVTTSPCREWVICAPAAFLGCGSRFSGSLSESNPDSPLPVT 221
PI+ P KSP + TTSP + + +P S S +P SP PV+
Sbjct: 24 PISSPTKSPTTPSAPTTSPTKSPAVTSPTTAPAKTPTASASSPVESPKSPAPVS 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,910,033
Number of Sequences: 1657284
Number of extensions: 12115301
Number of successful extensions: 28555
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28551
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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