Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0078.Seq
         (598 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p pro...    30   2.1  
AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-P...    30   2.1  
AY119556-1|AAM50210.1| 1272|Drosophila melanogaster GH28840p pro...    29   3.6  
AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-P...    29   3.6  
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA...    29   4.8  
AE014297-3736|AAF56416.3|  993|Drosophila melanogaster CG13654-P...    28   8.4  
AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-P...    28   8.4  

>BT021372-1|AAX33520.1| 2286|Drosophila melanogaster LP05745p
           protein.
          Length = 2286

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = -1

Query: 577 TDDMLRKRVSITADAVHRQRGAQCNYELFNRNNFSIRYWSWNYRGCWHQTCP--PIVPR* 404
           TD    K   + +D + R+           R+ FS  +  WNY  CW   C   P+  R 
Sbjct: 297 TDSSGSKYSRLVSDNLKRRVFISSVSSFLLRHGFSGLHLDWNYPKCWQSDCSRGPVTDRP 356

Query: 403 NI*SVL 386
           N+  +L
Sbjct: 357 NLTKLL 362


>AE014134-3630|EAA46011.1| 2286|Drosophila melanogaster CG18140-PA
           protein.
          Length = 2286

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
 Frame = -1

Query: 577 TDDMLRKRVSITADAVHRQRGAQCNYELFNRNNFSIRYWSWNYRGCWHQTCP--PIVPR* 404
           TD    K   + +D + R+           R+ FS  +  WNY  CW   C   P+  R 
Sbjct: 297 TDSSGSKYSRLVSDNLKRRVFISSVSSFLLRHGFSGLHLDWNYPKCWQSDCSRGPVTDRP 356

Query: 403 NI*SVL 386
           N+  +L
Sbjct: 357 NLTKLL 362


>AY119556-1|AAM50210.1| 1272|Drosophila melanogaster GH28840p protein.
          Length = 1272

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = +3

Query: 144  WSSTGDASFKCLPYQLXXXXXXXXXXXXGNGE-SGFDSEREPEKRLPHPRKAAGAQITHS 320
            WSS+ D  F  L  +             G+ +  G  +E EPE+  P P K      T+ 
Sbjct: 1173 WSSSSDDEFGRLDDETEAADGESRGAGAGSEQRDGERTELEPEEASPSPGKHFEENETYQ 1232

Query: 321  RHGEVV 338
            +HG +V
Sbjct: 1233 KHGWIV 1238


>AE014298-1554|AAF48000.3| 3539|Drosophila melanogaster CG11122-PA
            protein.
          Length = 3539

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = +3

Query: 144  WSSTGDASFKCLPYQLXXXXXXXXXXXXGNGE-SGFDSEREPEKRLPHPRKAAGAQITHS 320
            WSS+ D  F  L  +             G+ +  G  +E EPE+  P P K      T+ 
Sbjct: 3440 WSSSSDDEFGRLDDETEAADGESRGAGAGSEQRDGERTELEPEEASPSPGKHFEENETYQ 3499

Query: 321  RHGEVV 338
            +HG +V
Sbjct: 3500 KHGWIV 3505


>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
            protein.
          Length = 4498

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -2

Query: 585  AGSPTICSANVSVSPRMRCTDSAAHNATTS 496
            +GSP   S NV  +PR R ++SA  N+T S
Sbjct: 3688 SGSPPTASGNVPYNPRNRPSNSANGNSTPS 3717


>AE014297-3736|AAF56416.3|  993|Drosophila melanogaster CG13654-PA
           protein.
          Length = 993

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
 Frame = +2

Query: 302 RAN-YPLPARGGSDEK*RYGTLTRPRNRNEYTLNI-LTRNNWRASL 433
           RAN YPL   GG+D    +GT+ RP    E ++   +  N+W  +L
Sbjct: 352 RANGYPL---GGTDHNHGHGTIIRPNQTTEISIQFGVQPNSWHYAL 394


>AE014296-1481|AAN12009.1|  804|Drosophila melanogaster CG32353-PA
           protein.
          Length = 804

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -2

Query: 129 VIQIHQN*RLRTRGPPSIGFDL 64
           ++QI  N +  TR PPSIG DL
Sbjct: 353 IVQIRDNIQAETRRPPSIGGDL 374


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,094,184
Number of Sequences: 53049
Number of extensions: 568581
Number of successful extensions: 1472
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1396
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1470
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2420893683
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)