Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0076.Seq
(528 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase fa... 39 0.002
At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containi... 33 0.12
At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta... 33 0.12
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 32 0.21
At5g53570.1 68418.m06656 RabGAP/TBC domain-containing protein si... 32 0.27
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 32 0.27
At5g53930.1 68418.m06710 expressed protein 31 0.36
At3g28830.1 68416.m03597 expressed protein 31 0.36
At3g19150.2 68416.m02432 kip-related protein 6 (KRP6) / cyclin-d... 31 0.36
At3g19150.1 68416.m02431 kip-related protein 6 (KRP6) / cyclin-d... 31 0.36
At1g07490.1 68414.m00802 expressed protein 31 0.36
At2g14060.1 68415.m01564 S-adenosyl-L-methionine:carboxyl methyl... 31 0.48
At3g45630.1 68416.m04928 RNA recognition motif (RRM)-containing ... 31 0.63
At3g30190.1 68416.m03809 hypothetical protein 31 0.63
At3g05750.1 68416.m00646 expressed protein 30 1.1
At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911... 29 1.5
At5g55400.1 68418.m06902 fimbrin-like protein, putative similar ... 29 1.9
At4g15180.1 68417.m02328 SET domain-containing protein contains ... 29 1.9
At3g06630.1 68416.m00770 protein kinase family protein contains ... 29 1.9
At2g16480.1 68415.m01888 SWIB complex BAF60b domain-containing p... 29 2.6
At1g36230.1 68414.m04504 hypothetical protein 29 2.6
At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl methyl... 28 3.4
At5g59920.1 68418.m07514 DC1 domain-containing protein contains ... 28 3.4
At5g37080.1 68418.m04451 hypothetical protein includes At5g37080... 28 3.4
At5g16680.1 68418.m01951 PHD finger family protein contains Pfam... 28 3.4
At4g02720.1 68417.m00368 expressed protein temporary automated f... 28 3.4
At3g23700.1 68416.m02980 S1 RNA-binding domain-containing protei... 28 3.4
At1g80000.2 68414.m09359 expressed protein identical to unknown ... 28 3.4
At1g80000.1 68414.m09358 expressed protein identical to unknown ... 28 3.4
At1g19640.1 68414.m02448 S-adenosyl-L-methionine:jasmonic acid c... 28 3.4
At5g02030.1 68418.m00123 homeodomain protein (BELLRINGER) severa... 28 4.5
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 28 4.5
At4g21660.1 68417.m03138 proline-rich spliceosome-associated (PS... 28 4.5
At4g19610.1 68417.m02881 RNA recognition motif (RRM)-containing ... 28 4.5
At3g57980.1 68416.m06462 DNA-binding bromodomain-containing prot... 28 4.5
At3g28790.1 68416.m03593 expressed protein 28 4.5
At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contai... 28 4.5
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 27 5.9
At4g17620.1 68417.m02636 glycine-rich protein 27 5.9
At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1 GI... 27 5.9
At3g42790.1 68416.m04474 PHD finger family protein contains PHD-... 27 5.9
At3g26050.1 68416.m03244 expressed protein 27 5.9
At3g19750.1 68416.m02500 hypothetical protein 27 5.9
At2g44940.1 68415.m05594 AP2 domain-containing transcription fac... 27 5.9
At2g30690.1 68415.m03742 expressed protein contains Pfam profile... 27 5.9
At2g02480.1 68415.m00187 DNA polymerase-related weak similarity ... 27 5.9
At1g16400.1 68414.m01961 cytochrome P450 family protein similar ... 27 5.9
At5g52710.1 68418.m06543 heavy-metal-associated domain-containin... 27 7.8
At5g07700.1 68418.m00883 myb family transcription factor (MYB76)... 27 7.8
At3g28820.1 68416.m03596 expressed protein ; expression support... 27 7.8
At3g28810.1 68416.m03595 hypothetical protein 27 7.8
At2g30530.1 68415.m03718 expressed protein 27 7.8
At2g03470.2 68415.m00306 myb family transcription factor / ELM2 ... 27 7.8
At2g03470.1 68415.m00305 myb family transcription factor / ELM2 ... 27 7.8
At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1 pro... 27 7.8
>At2g43900.1 68415.m05457 endonuclease/exonuclease/phosphatase family
protein belongs to Pfam:PF03372:
Endonuclease/Exonuclease/phosphatase family; contains 3
WD-40 repeats (PF00400);similar to Type II
inositol-1,4,5-trisphosphate 5-phosphatase EC 3.1.3.56
(5PTASE) (INPP5B) (SP:P32019) [Homo sapiens]
Length = 1305
Score = 38.7 bits (86), Expect = 0.002
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Frame = -2
Query: 257 SAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDT 78
S S S G N KSS DG S+S +++KS S++ + SDG S S+ S D
Sbjct: 1122 SKSSKKSDGDSNSKSSK---KSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDG 1178
Query: 77 KS-SNSNVQSDALSEDSSEVDID 12
S S S+ +SD S S D
Sbjct: 1179 DSNSKSSKKSDGDSNSKSSKKSD 1201
Score = 37.5 bits (83), Expect = 0.006
Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -2
Query: 257 SAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDT 78
S S S G N KSS DG S+S +++KS S++ + SDG S S+ S D
Sbjct: 1146 SKSSKKSDGDSNSKSSK---KSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDG 1202
Query: 77 KS-SNSNVQSDALSEDSSE 24
S S S +SD + S+
Sbjct: 1203 DSCSKSQKKSDGDTNSKSQ 1221
Score = 36.7 bits (81), Expect = 0.010
Identities = 27/77 (35%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = -2
Query: 239 SRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKS-SNS 63
+ G N KSS DG S+S +++KS S++ + SDG S S+ S D S S S
Sbjct: 1116 NEGDSNSKSSK---KSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKS 1172
Query: 62 NVQSDALSEDSSEVDID 12
+ +SD S S D
Sbjct: 1173 SKKSDGDSNSKSSKKSD 1189
Score = 33.9 bits (74), Expect = 0.068
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = -2
Query: 254 AHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAED-T 78
++S S+ S S + DG ++S + +K SS+ + +DG S+S+ D
Sbjct: 1192 SNSKSSKKSDGDSCSKSQKKSDGDTNSKSQKKGDGDSSSKSHKKNDGDSSSKSHKKNDGD 1251
Query: 77 KSSNSNVQSDALSEDSS 27
SS S+ +SD S S
Sbjct: 1252 SSSKSHKKSDGDSSSKS 1268
Score = 33.5 bits (73), Expect = 0.090
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2
Query: 257 SAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASR-ESSAED 81
S S S G N KSS DG S+S +++KS S + + SDG + S+ + +
Sbjct: 1170 SKSSKKSDGDSNSKSSK---KSDGDSNSKSSKKSDGDSCSKSQKKSDGDTNSKSQKKGDG 1226
Query: 80 TKSSNSNVQSDALSEDSS 27
SS S+ ++D S S
Sbjct: 1227 DSSSKSHKKNDGDSSSKS 1244
Score = 31.1 bits (67), Expect = 0.48
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = -2
Query: 245 SGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSN 66
S +G + S S++ + DG SSS + +K+ SS+ + SDG S+S+ + SS
Sbjct: 1220 SQKKGDGDSSSKSHKKN-DGDSSSKSHKKNDGDSSSKSHKKSDGDSSSKSHKKSEGDSSL 1278
Query: 65 S 63
S
Sbjct: 1279 S 1279
Score = 30.7 bits (66), Expect = 0.63
Identities = 21/67 (31%), Positives = 36/67 (53%)
Frame = -2
Query: 224 NQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDA 45
N KS S + + +G S+S +++KS S++ + SDG S S+ S D SNS +
Sbjct: 1107 NSKSQSLKKN-EGDSNSKSSKKSDGDSNSKSSKKSDGDSNSKSSKKSD-GDSNSKSSKKS 1164
Query: 44 LSEDSSE 24
+ +S+
Sbjct: 1165 DGDSNSK 1171
>At3g13150.1 68416.m01645 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 551
Score = 33.1 bits (72), Expect = 0.12
Identities = 25/74 (33%), Positives = 36/74 (48%)
Frame = -2
Query: 248 SSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSS 69
SS S S SSS + D SSS ++ +SS +S ++S S+S SS+ + SS
Sbjct: 450 SSDSDSSSPDSSSSVSSSPDS-SSSVSSSPDSYSSFSSSPDSSSSVSSSLFSSSRENSSS 508
Query: 68 NSNVQSDALSEDSS 27
S + S D S
Sbjct: 509 PDYSNSVSSSLDYS 522
Score = 29.9 bits (64), Expect = 1.1
Identities = 25/80 (31%), Positives = 38/80 (47%)
Frame = -2
Query: 257 SAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDT 78
S SS S S SSS + D +SS +++ S S S+S+ S+SRE+S+
Sbjct: 457 SPDSSSSVSSSPDSSSSVSSSPDSYSSFSSSPDSSSSVSSSLF------SSSRENSSSPD 510
Query: 77 KSSNSNVQSDALSEDSSEVD 18
S++ + D SS D
Sbjct: 511 YSNSVSSSLDYSGSVSSSSD 530
>At1g05490.1 68414.m00559 C protein immunoglobulin-A-binding beta
antigen-related contains weak similarity to C protein
immunoglobulin-A-binding beta antigen [Streptococcus
agalactiae] gi|18028989|gb|AAL56250
Length = 731
Score = 33.1 bits (72), Expect = 0.12
Identities = 26/110 (23%), Positives = 50/110 (45%), Gaps = 1/110 (0%)
Frame = -2
Query: 344 CRPKLRSL*LCRFGPDQQELRQGLQ**KYSAHSSGSRGSQNQKSSSY-RADKDGFSSSTN 168
C P++R L L + P + E+ + + + ++ ++SS + DG SS+
Sbjct: 194 CSPEIRGLVLEKSVPGEIEILSDSESETEARRRASAKKKLFEESSRIVESISDGEDSSSE 253
Query: 167 TEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDSSEVD 18
T++ + + +S + S+ED SS+S+ S + S SS D
Sbjct: 254 TDEEEEENQDSEDNNTKDNVTVESLSSEDPSSSSSSSSSSSSSSSSSSSD 303
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 32.3 bits (70), Expect = 0.21
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 6/79 (7%)
Frame = -2
Query: 236 RGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSV--VETSDGA----SASRESSAEDTK 75
+G KS K G +SS+ + KSK S +V + SD SAS S+ ED +
Sbjct: 143 KGGNTAKSPPVAPKKSGLNSSSTSSKSKKEGSENVRIKKASDKEIALDSASMSSAQEDHQ 202
Query: 74 SSNSNVQSDALSEDSSEVD 18
V+SD L +++
Sbjct: 203 EEILKVESDHLQVSDHDIE 221
>At5g53570.1 68418.m06656 RabGAP/TBC domain-containing protein
similar to GTPase activating protein [Yarrowia
lipolytica] GI:2370595; contains Pfam profile PF00566:
TBC domain
Length = 550
Score = 31.9 bits (69), Expect = 0.27
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = -2
Query: 179 SSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDSSEVDI 15
S T+T SSS+S+ +S + S SS+ + +SNS S++ S SS + +
Sbjct: 7 SYTSTSSGNSSSSSSLPSSSSSSLPSSSSSSPPSSNSNSYSNSNSSSSSSSWIHL 61
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 31.9 bits (69), Expect = 0.27
Identities = 24/99 (24%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Frame = -2
Query: 305 GPDQQELRQGLQ**KYSAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSN-SVV 129
G DQ R+ K H SR N ++ + K G +SS K++ +
Sbjct: 283 GSDQDVYRKHASNGKGQTHKQQSRAKPNMRTPPAKVGKKGSTSSP--AKARIAKKPWQAK 340
Query: 128 ETSDGASASRESSAEDTKSSNSNVQSDALSEDSSEVDID 12
ET + E +E+T+ NV+ +++E D D
Sbjct: 341 ETFEEVEREEEEDSEETEEDRDNVEDGWRFGENNEDDDD 379
>At5g53930.1 68418.m06710 expressed protein
Length = 529
Score = 31.5 bits (68), Expect = 0.36
Identities = 18/75 (24%), Positives = 33/75 (44%)
Frame = -2
Query: 260 YSAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAED 81
YS S G S RAD +GF +E SK S +++ ++ D + ++ + E+
Sbjct: 229 YSEDSDEMDGESIDSYSRIRADDNGFGEYNKSETSKVSHTDNSLKDDDLEAILKKRALEN 288
Query: 80 TKSSNSNVQSDALSE 36
K Q +++
Sbjct: 289 LKRFRGVTQKSGIAK 303
>At3g28830.1 68416.m03597 expressed protein
Length = 539
Score = 31.5 bits (68), Expect = 0.36
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Frame = -2
Query: 257 SAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASA--SRES--- 93
S SSGS +++++SSS + G ++ + E S S++ E+S G++A S+ES
Sbjct: 211 SVSSSGSVSTKSKESSSSGSSASGSVATKSKESSGGSAATKSKESSGGSAATKSKESSGG 270
Query: 92 SAEDTKSSNSNVQSDALSEDSS 27
SA K+S S S S S
Sbjct: 271 SATTGKTSGSPSGSPKASPSGS 292
Score = 30.7 bits (66), Expect = 0.63
Identities = 27/72 (37%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = -2
Query: 233 GSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESS--AEDTKSSNSN 60
G+ + +SSS ++ S S +T KSK SSS+ + A+ S+ESS + TKS S+
Sbjct: 198 GAASSESSSTKSGSVSSSGSVST-KSKESSSSGSSASGSVATKSKESSGGSAATKSKESS 256
Query: 59 VQSDAL-SEDSS 27
S A S++SS
Sbjct: 257 GGSAATKSKESS 268
>At3g19150.2 68416.m02432 kip-related protein 6 (KRP6) /
cyclin-dependent kinase inhibitor 6 (ICK6) identical to
cyclin-dependent kinase inhibitor 6 (krp6) [Arabidopsis
thaliana] GI:14422295
Length = 176
Score = 31.5 bits (68), Expect = 0.36
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = -2
Query: 257 SAHSSGSRGSQNQK----SSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESS 90
S+ SSG S++++ SSS+ D + T TE S F +SN ETS + E++
Sbjct: 72 SSISSGCFTSESKEIAKNSSSFGVDLEDHQIETETETSTFITSNFRKETSPVSEGLGETT 131
Query: 89 AEDTKSSNSNVQSDALSEDSSEVDID 12
E SS + + + + + +I+
Sbjct: 132 TEMESSSATKRKQPGVRKTPTAAEIE 157
>At3g19150.1 68416.m02431 kip-related protein 6 (KRP6) /
cyclin-dependent kinase inhibitor 6 (ICK6) identical to
cyclin-dependent kinase inhibitor 6 (krp6) [Arabidopsis
thaliana] GI:14422295
Length = 196
Score = 31.5 bits (68), Expect = 0.36
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Frame = -2
Query: 257 SAHSSGSRGSQNQK----SSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESS 90
S+ SSG S++++ SSS+ D + T TE S F +SN ETS + E++
Sbjct: 72 SSISSGCFTSESKEIAKNSSSFGVDLEDHQIETETETSTFITSNFRKETSPVSEGLGETT 131
Query: 89 AEDTKSSNSNVQSDALSEDSSEVDID 12
E SS + + + + + +I+
Sbjct: 132 TEMESSSATKRKQPGVRKTPTAAEIE 157
>At1g07490.1 68414.m00802 expressed protein
Length = 107
Score = 31.5 bits (68), Expect = 0.36
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -2
Query: 182 SSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDSSE 24
SSS+ + KSKFS S S +S A A SS+ TK S + S ++S SS+
Sbjct: 18 SSSSTSSKSKFSRSFSTSASSSKAPAFVRSSS--TKCSVPSSSSSSISRSSSK 68
>At2g14060.1 68415.m01564 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 359
Score = 31.1 bits (67), Expect = 0.48
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 23 PRKSLHLVHRSERYYWMIWYPPLMIRD*QKLHLKF 127
PRKSLH VH + +W+ P + + + +H+K+
Sbjct: 132 PRKSLHFVHSAFSIHWLSRIPDGLESNTKSIHIKY 166
>At3g45630.1 68416.m04928 RNA recognition motif (RRM)-containing
protein similar to SP|P34909 General negative regulator
of transcription subunit 4 {Saccharomyces cerevisiae};
contains InterPro entry IPR000504: RNA-binding region
RNP-1 (RNA recognition motif) (RRM)
Length = 989
Score = 30.7 bits (66), Expect = 0.63
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Frame = -2
Query: 212 SSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASAS---RESS-AEDTKSSNS-NVQSD 48
SS+ ++ G + + + SKFSSS S+++++ AS S RE+S D+K+ +S + SD
Sbjct: 539 SSFNNNRRGIAEAVSHSTSKFSSSISILDSNHLASRSFQNRETSCGMDSKTGSSFEIGSD 598
Query: 47 AL 42
L
Sbjct: 599 RL 600
>At3g30190.1 68416.m03809 hypothetical protein
Length = 263
Score = 30.7 bits (66), Expect = 0.63
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = -2
Query: 191 DGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSN 60
+G SSS+++ S SSS+S +S +S+S +S+ + SS S+
Sbjct: 25 NGSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSSSSSSFSS 68
Score = 29.1 bits (62), Expect = 1.9
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -2
Query: 257 SAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNS 135
S+ SS S S + SSS + SSS++T S SSS S
Sbjct: 27 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSSSSSSFS 67
Score = 28.7 bits (61), Expect = 2.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -2
Query: 215 SSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESS 90
SSS + SSS+++ S SSS+S TS +S+S SS
Sbjct: 27 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSSSSSSFSS 68
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -2
Query: 257 SAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSS 144
S+ SS S S + SSS + S+S+++ S FSS
Sbjct: 31 SSSSSSSSSSSSSSSSSSSSSSSSSSTSSSSSSSSFSS 68
Score = 27.1 bits (57), Expect = 7.8
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 257 SAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVV 129
S+ SS S S + SSS + SSST++ S S S+ V
Sbjct: 29 SSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSSSSSSFSSYFV 71
>At3g05750.1 68416.m00646 expressed protein
Length = 798
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/47 (27%), Positives = 29/47 (61%)
Frame = -2
Query: 167 TEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDSS 27
+ K FSSS+S + S+G+ ++++ +KS S ++ D + ++S+
Sbjct: 23 SRKKLFSSSSSSSKLSEGSKQEKQNAQNPSKSWPSLIEGDEIGKNST 69
>At1g19835.1 68414.m02487 expressed protein contains Pfam PF05911:
Plant protein of unknown function (DUF869)
Length = 982
Score = 29.5 bits (63), Expect = 1.5
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = -2
Query: 230 SQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQS 51
S +Q+ + +++ +++STN + SK SS + S S +S SNS+ S
Sbjct: 902 SPSQEQQALNPEEEEYATSTNPQDSKLSSPSDKDTPSMNTMKSPVASKHRHTKSNSSSSS 961
Query: 50 DALSED 33
L+ +
Sbjct: 962 SGLTPE 967
>At5g55400.1 68418.m06902 fimbrin-like protein, putative similar to
fimbrin-like protein (ATFIM1) [Arabidopsis thaliana]
GI:2905893; contains Pfam profile PF00307: Calponin
homology (CH) domain
Length = 714
Score = 29.1 bits (62), Expect = 1.9
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -2
Query: 227 QNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSD 48
Q Q SSS + SSST+ S ++ S ++D + A + ++ S N V S
Sbjct: 623 QQQSSSSESSSSSSDSSSTH---STTTTCTSTCTSTDASPAPSVTGEDEVSSLNGEVSSL 679
Query: 47 ALSEDS 30
+ ED+
Sbjct: 680 TIEEDN 685
>At4g15180.1 68417.m02328 SET domain-containing protein contains Pfam
profile PF00856: SET domain
Length = 2326
Score = 29.1 bits (62), Expect = 1.9
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Frame = -2
Query: 263 KYSAHSSGSRGSQNQKS-SSYRADKDGFSSSTNTEKSKFSS-SNSVVETSDGASASRESS 90
KY + +S + G Y +D++ + + FSS S++ E SD + SS
Sbjct: 1489 KYMSRTSDTFGVNGASDYGEYASDREIKRRLSKLNRKSFSSESDTSSELSDNGKSDNYSS 1548
Query: 89 AEDTKSSNSNVQSDALSED 33
A ++S S+++S+ S+D
Sbjct: 1549 ASASESE-SDIRSEGRSQD 1566
>At3g06630.1 68416.m00770 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain,
PF00989 PAS domain, and PF00785 PAC motif
Length = 671
Score = 29.1 bits (62), Expect = 1.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 326 NGVLVGIVRITLSVRSFRCPCLSKQRCRPVRP 421
NG +VGI+ IT + + P LS R +P P
Sbjct: 162 NGTVVGIISITSDIAPYLNPRLSLPRLKPQEP 193
>At2g16480.1 68415.m01888 SWIB complex BAF60b domain-containing
protein / plus-3 domain-containing protein contains Pfam
profiles PF02201: BAF60b domain of the SWIB complex,
PF03126: Plus-3 domain
Length = 383
Score = 28.7 bits (61), Expect = 2.6
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = -2
Query: 218 KSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALS 39
K A K G +S T+ S S+S + S S+ SAE SS SD
Sbjct: 84 KGHETNASKQGTASETDYVTDGGSDSDSSPKKRKTRSRSKSGSAEKILSSGDKNLSDETM 143
Query: 38 EDSSEVDIDL 9
E +S+ +DL
Sbjct: 144 EWASKELLDL 153
>At1g36230.1 68414.m04504 hypothetical protein
Length = 376
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -2
Query: 167 TEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDSSEVDIDLGN 3
T + S +VV+ + A+++ + AED SNSN D VD D+ +
Sbjct: 4 TRSYRRGHSCTVVDPAKFANSASDLDAEDLSCSNSNCNRDVSVSHEISVDSDVSS 58
>At5g66430.1 68418.m08378 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
SAM:salicylic acid carboxyl methyltransferase (SAMT)
[GI:6002712][Clarkia breweri] and to SAM:benzoic acid
carboxyl methyltransferase
(BAMT)[GI:9789277][Antirrhinum majus]
Length = 354
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 23 PRKSLHLVHRSERYYWMIWYP 85
PRKSLH VH S +W+ P
Sbjct: 130 PRKSLHFVHSSYSLHWLSKVP 150
>At5g59920.1 68418.m07514 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 710
Score = 28.3 bits (60), Expect = 3.4
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -2
Query: 158 SKFSSSNSVVETSDGASASRESS-AEDTKSSNSNVQSDALSEDSSEVDID 12
S+ S + + SD S + ++DT +S+V SD +S+D+S D D
Sbjct: 637 SEDGSDDGSDDVSDDVSDDPSNDVSDDTSDDDSDVVSDVVSDDASNDDSD 686
>At5g37080.1 68418.m04451 hypothetical protein includes At5g37080,
At5g37170, At2g05090
Length = 566
Score = 28.3 bits (60), Expect = 3.4
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Frame = -2
Query: 308 FGPDQQELRQGLQ**KYSAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVV 129
FG D + GL + + + + GS+ Q + S +TN E S SS
Sbjct: 434 FGTDIAKEESGLL--EDTQYDPSTIGSEEQGQLMLINSSENCSDATNNELSTPSSKRGSA 491
Query: 128 ETSDGASASRES----SAEDTKSSNSNVQSDALSEDSSEVDI 15
E SD A S + S ++++ + + ++ + E++ EV +
Sbjct: 492 ELSDMADQSSTTKKLCSRVNSENGDDEIGTNVIIENADEVKV 533
>At5g16680.1 68418.m01951 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1290
Score = 28.3 bits (60), Expect = 3.4
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = -2
Query: 200 ADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDSSEV 21
++K F + +K SV ++ ++ + + SSNS+ S++ S+DS V
Sbjct: 220 SEKGNFKEKSRPGGNKERQEPSVEGSTRSGENRKDGKSSKSSSSNSSAVSESESDDSEMV 279
Query: 20 DIDL 9
+ D+
Sbjct: 280 EHDV 283
>At4g02720.1 68417.m00368 expressed protein temporary automated
functional assignment
Length = 422
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/94 (21%), Positives = 36/94 (38%)
Frame = -2
Query: 299 DQQELRQGLQ**KYSAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETS 120
D++ R+ K S S R ++ + + +D D S + + SSS +T
Sbjct: 148 DRRRRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDESSDEDSKAEISASSSGEEEDTK 207
Query: 119 DGASASRESSAEDTKSSNSNVQSDALSEDSSEVD 18
+ ++SS +K S D +E D
Sbjct: 208 SKSKRRKKSSDSSSKRSKGEKTKSGSDSDGTEED 241
>At3g23700.1 68416.m02980 S1 RNA-binding domain-containing protein
contains Pfam domain, PF00575: S1 RNA binding domain
Length = 392
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -2
Query: 215 SSSYRADKDGFSSSTNTEKSKFSSSNSVV-ETSDGASASRESSAEDTKS 72
SSS AD D +S + S S+SNS++ +TSD ASA+ S + K+
Sbjct: 55 SSSATADTDR-NSDQSASSSVLSASNSLLRDTSDEASAAGPSDWKTAKA 102
>At1g80000.2 68414.m09359 expressed protein identical to unknown
protein GB:AAD55481 [Arabidopsis thaliana]
Length = 605
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -2
Query: 209 SYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDS 30
SY+ADK G SS + + SS+N E + +SN N Q SE S
Sbjct: 543 SYQADKPGLPSSAGSSSQENSSNNPNDEEPMERPEVTNNGNSQRSNSNPNKQPRRYSEMS 602
>At1g80000.1 68414.m09358 expressed protein identical to unknown
protein GB:AAD55481 [Arabidopsis thaliana]
Length = 605
Score = 28.3 bits (60), Expect = 3.4
Identities = 19/60 (31%), Positives = 25/60 (41%)
Frame = -2
Query: 209 SYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDS 30
SY+ADK G SS + + SS+N E + +SN N Q SE S
Sbjct: 543 SYQADKPGLPSSAGSSSQENSSNNPNDEEPMERPEVTNNGNSQRSNSNPNKQPRRYSEMS 602
>At1g19640.1 68414.m02448 S-adenosyl-L-methionine:jasmonic acid
carboxyl methyltransferase (JMT) nearly identical to
gi:13676829
Length = 389
Score = 28.3 bits (60), Expect = 3.4
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 23 PRKSLHLVHRSERYYWMIWYP 85
PR+SLH VH S +W+ P
Sbjct: 149 PRRSLHFVHSSSSLHWLSQVP 169
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 111 SSI*SFYDAIRRTKFGFFSIRTGGKTVLVSAVTRRF 218
+S+ FYD + K G R GG++ VSAV F
Sbjct: 108 ASLPEFYDRVNNNKEGLGFGRGGGESCFVSAVPGSF 143
>At5g02030.1 68418.m00123 homeodomain protein (BELLRINGER) several
homeodomain proteins;
Length = 575
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = -2
Query: 251 HSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKS 72
H +R SQ SSS+R ++ + + + SS+S + + +S R + +D
Sbjct: 415 HMLETRQSQRSSSSSWRDERTSTTVFPDNSNNN-PSSSSAQQRPNNSSPPRRARNDDVHG 473
Query: 71 SNSN 60
+N+N
Sbjct: 474 TNNN 477
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 27.9 bits (59), Expect = 4.5
Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -2
Query: 257 SAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFS-SSNSVVETSDGASASRESSAED 81
S+ G+ + +K SS K+ +S E+ + + SSN+ S+ S D
Sbjct: 399 SSSQEGNENKETEKKSSESQRKENTNSEKKIEQVESTDSSNTQKGDEQKTDESKRESGND 458
Query: 80 TKSSNSNVQSDALSEDSSE 24
T SN + D+ +S +
Sbjct: 459 T--SNKETEDDSSKTESEK 475
>At4g21660.1 68417.m03138 proline-rich spliceosome-associated (PSP)
family protein similar to SP|Q13435 Splicing factor 3B
subunit 2 (Spliceosome associated protein 145) (SAP 145)
(SF3b150) (Pre-mRNA splicing factor SF3b 145 kDa
subunit) {Homo sapiens}; contains Pfam profiles PF04046:
PSP, PF04037: Domain of unknown function (DUF382)
Length = 584
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/64 (23%), Positives = 25/64 (39%)
Frame = -2
Query: 194 KDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDSSEVDI 15
+DGF+ KF+ + DG E + K NS+ SD +D+ +
Sbjct: 91 EDGFNDEFKEIFEKFNFREPLASEEDGTKDESEEKEDVKKKVNSDSDSDDDEQDNQNKEK 150
Query: 14 DLGN 3
+ N
Sbjct: 151 GISN 154
>At4g19610.1 68417.m02881 RNA recognition motif (RRM)-containing
protein contains InterPro entry IPR000504: RNA-binding
region RNP-1 (RNA recognition motif) (RRM)
Length = 783
Score = 27.9 bits (59), Expect = 4.5
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = -2
Query: 176 STNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDSSE 24
S++TEK+K S VV SD S E K + S+ +SD SEDSSE
Sbjct: 150 SSDTEKTKKSK---VVAASDDVS-DMEYFKSRIKKNLSDSESDNESEDSSE 196
>At3g57980.1 68416.m06462 DNA-binding bromodomain-containing protein
contains bromodomain, INTERPRO:IPR001487
Length = 632
Score = 27.9 bits (59), Expect = 4.5
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = -2
Query: 149 SSSNSVVETSDGASASRESSAEDTKSSNSNVQSDAL 42
SSS +VVET S++ + AE KS++ + + DA+
Sbjct: 535 SSSETVVETVKAESSNGKRGAEQRKSNSKSEKVDAV 570
>At3g28790.1 68416.m03593 expressed protein
Length = 608
Score = 27.9 bits (59), Expect = 4.5
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -2
Query: 182 SSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDSS 27
S+ST+ + S S+++ S ASA +SAE++ +S + S SS
Sbjct: 386 STSTDGKASSKGSASASAGASASASAGASASAEESAASQKKESNSKSSSSSS 437
Score = 27.1 bits (57), Expect = 7.8
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Frame = -2
Query: 257 SAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGA---SASRESSA 87
S+ S GS S N+ SS+ ++ G SS + +E + S +ET+ G+ + S+ SS+
Sbjct: 196 SSGSDGSSSSDNESSSNTKSQ--GTSSKSGSESTAGS-----IETNTGSKTEAGSKSSSS 248
Query: 86 EDTK----SSNSNVQSDALSEDS 30
TK S+ N D S
Sbjct: 249 AKTKEVSGGSSGNTYKDTTGSSS 271
>At1g18950.1 68414.m02358 aminoacyl-tRNA synthetase family contains
aminoacyl-transfer RNA synthetases class-II signature 1,
PROSITE:PS00179
Length = 766
Score = 27.9 bits (59), Expect = 4.5
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = -2
Query: 248 SSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSV-VETSDGASASRESSAEDTK- 75
SSGS G + + Y+ D+D E+ + S S E SD +++ +TK
Sbjct: 557 SSGSEGDEEKGDEEYKWDEDNAEYEEEEEEEEEEDSLSASEEDSDEPRRAKKMPRRETKL 616
Query: 74 SSNSNVQSDALSEDSSEVDID 12
S SN L ID
Sbjct: 617 RSRSNDFRPGLRRSKRATRID 637
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 27.5 bits (58), Expect = 5.9
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = -2
Query: 224 NQKSSSYRADKDGFSSSTNTEKSKFSSSNS---VVETSDGASASRESSAEDTKSSNSNVQ 54
N++SSS + FSS +++ S SS N+ E G ++ S + +++
Sbjct: 23 NKRSSSSSSSSSSFSSLSSSSSSSSSSCNNNNIKWEMRPGGMLVQKRSEDSNTEDLISLR 82
Query: 53 SDALSEDSSEVDID 12
+S+ S E+ ID
Sbjct: 83 VSTVSQLSYEISID 96
>At4g17620.1 68417.m02636 glycine-rich protein
Length = 544
Score = 27.5 bits (58), Expect = 5.9
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = -2
Query: 239 SRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSN 60
SR S+++ SSS A SSS+++ S SSS++ +G +S + S S+
Sbjct: 22 SRSSRSKSSSSGNA-----SSSSSSSSSSSSSSSAAGGDGEGDGGGADSGSASDSGSGSS 76
Query: 59 VQSDALSEDSSE 24
+ +D E
Sbjct: 77 GGKEEHGDDKVE 88
>At3g50110.1 68416.m05478 phosphatase-related similar to PTEN1
GI:5566292 from [Drosophila melanogaster]; contains
prosite evidence: PS00383: Tyrosine specific protein
phosphatases active site
Length = 632
Score = 27.5 bits (58), Expect = 5.9
Identities = 17/73 (23%), Positives = 29/73 (39%)
Frame = -2
Query: 257 SAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDT 78
S+ + S+ N+K +D DG + S + S + T+ E D
Sbjct: 522 SSSADSSKLKSNEKDDDVFSDSDGEEEGNSQSYSTNEKTASSMHTTSKPHQINEPPKRDD 581
Query: 77 KSSNSNVQSDALS 39
S+N +V S + S
Sbjct: 582 PSANRSVTSSSSS 594
>At3g42790.1 68416.m04474 PHD finger family protein contains
PHD-finger domain, INTERPRO:IPR001965
Length = 250
Score = 27.5 bits (58), Expect = 5.9
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 182 SSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSD 48
SS+ N +K S SNS V TS+G S+ + E+ + + + + D
Sbjct: 148 SSAANQNGNK-SKSNSKVRTSEGKSSKTKQPKEEDEEIDEDDEDD 191
>At3g26050.1 68416.m03244 expressed protein
Length = 533
Score = 27.5 bits (58), Expect = 5.9
Identities = 24/71 (33%), Positives = 31/71 (43%)
Frame = -2
Query: 224 NQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDA 45
N++ SS D S S E K + SVV +G S S S SS S V S
Sbjct: 127 NREVSSNEVDSVVPSISVIDETGKVENLKSVVVPDEGNSTSL-SKERPPSSSGSKVSSSK 185
Query: 44 LSEDSSEVDID 12
L E S +++D
Sbjct: 186 L-ESSVVIELD 195
>At3g19750.1 68416.m02500 hypothetical protein
Length = 378
Score = 27.5 bits (58), Expect = 5.9
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -2
Query: 152 FSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDSSEVDID 12
F+ + SDG +A E+ E T S++ S A SE+ SE D
Sbjct: 260 FADDYNEESESDGENAEAEAD-ESTTESDAEEDSSAQSEEDSEAKAD 305
>At2g44940.1 68415.m05594 AP2 domain-containing transcription factor
TINY, putative similar to transcription factor TINY
(GI:1246403) [Arabidopsis thaliana]; contains pFAM
domain (PF00847)
Length = 295
Score = 27.5 bits (58), Expect = 5.9
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Frame = -2
Query: 176 STNTEKSKFSSSNSVVETSDG--ASASRESSAEDTKSSNSNVQSDALSEDSSE 24
S+ ++ + SS+ V +S ASAS SS + SS+S+ S+ + ED+S+
Sbjct: 9 SSVSQVTFISSAIPAVSSSSSITASASLSSSPTTSSSSSSSTNSNFIEEDNSK 61
>At2g30690.1 68415.m03742 expressed protein contains Pfam profile
PF04576: Protein of unknown function, DUF593; expression
supported by MPSS
Length = 788
Score = 27.5 bits (58), Expect = 5.9
Identities = 18/74 (24%), Positives = 33/74 (44%)
Frame = -2
Query: 233 GSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQ 54
G + + + ++ FS+ E + + + S+ S + E S+ED SN+
Sbjct: 480 GEEESEVNENNVAEEYFSNEEEDEVN--GHTEPLTSKSESGSFAEEQSSED--EDGSNIY 535
Query: 53 SDALSEDSSEVDID 12
S A S+E D+D
Sbjct: 536 SVAKDHSSNEEDVD 549
>At2g02480.1 68415.m00187 DNA polymerase-related weak similarity to
DNA polymerase III holoenzyme tau subunit [Thermus
thermophilus] GI:2583049
Length = 1218
Score = 27.5 bits (58), Expect = 5.9
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = -2
Query: 245 SGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSN 66
S S S +++ ++ + FS + K SSS+ ++E S+G+ AS E+S T N
Sbjct: 847 SASPASVIKRNGNHSHEAKPFSRVIDNNCYKSSSSSQMIE-SEGSIASHENSIASTMMLN 905
Query: 65 SNVQSDALSE 36
S+ L++
Sbjct: 906 QR-SSEKLND 914
>At1g16400.1 68414.m01961 cytochrome P450 family protein similar to
gb|AF069494 cytochrome P450 from Sinapis alba and is a
member of the PF|00067 Cytochrome P450 family; identical
to cytochrome P450 CYP79F2 (CYP79F2) GI:10946207
Length = 537
Score = 27.5 bits (58), Expect = 5.9
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +2
Query: 329 GVLVGIVRITLSVRSFRCPCLSKQRCRPVRP 421
G +V I ITL R F P +K RCR + P
Sbjct: 16 GFIVFIASITLLGRIFSRPSKTKDRCRQLPP 46
>At5g52710.1 68418.m06543 heavy-metal-associated domain-containing
protein contains Pfam profile PF00403:
Heavy-metal-associated domain
Length = 451
Score = 27.1 bits (57), Expect = 7.8
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = -2
Query: 248 SSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSS-NSVVETSDGASASRESSAEDTKS 72
SS +R + SS D +SS++ S +S++ NS +S S S E+ ++ +
Sbjct: 364 SSSTRNRSSFSRSSSAMDLSQTTSSSSVAYSSYSTTPNSSRNSSHSRSRSSENLSQFQSN 423
Query: 71 SNSNVQSDALSEDSS 27
S N + + S +S
Sbjct: 424 STGNSYTSSQSNTAS 438
>At5g07700.1 68418.m00883 myb family transcription factor (MYB76)
contains Pfam profile: PF00249 myb-like DNA-binding
domain
Length = 338
Score = 27.1 bits (57), Expect = 7.8
Identities = 18/75 (24%), Positives = 32/75 (42%)
Frame = -2
Query: 263 KYSAHSSGSRGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAE 84
K+ ++ + +SSS SS+ N+ KSK SS + +E+ + R +
Sbjct: 141 KFDFQKKSNQDEHSSQSSSTTPASLPLSSNLNSVKSKISSGETQIESGHVSCKKRFGRSS 200
Query: 83 DTKSSNSNVQSDALS 39
T + V + A S
Sbjct: 201 STSRLLNKVAARASS 215
>At3g28820.1 68416.m03596 expressed protein ; expression supported
by MPSS
Length = 434
Score = 27.1 bits (57), Expect = 7.8
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -2
Query: 230 SQNQKSSSYRADKDGFSSSTNTEKSKF-SSSNSVVETSDGASASRESSAEDTKSSNSNVQ 54
S+N KSS ++ S + K + +S+ ETS SA SS TK +S Q
Sbjct: 206 SENSKSSGKESESSAKGESETSAKGESKTSAKGESETSSSKSAG-GSSTSATKEESSASQ 264
Query: 53 SDALS 39
S ++
Sbjct: 265 SSGVT 269
>At3g28810.1 68416.m03595 hypothetical protein
Length = 434
Score = 27.1 bits (57), Expect = 7.8
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = -2
Query: 230 SQNQKSSSYRADKDGFSSSTNTEKSKF-SSSNSVVETSDGASASRESSAEDTKSSNSNVQ 54
S+N KSS ++ S + K + +S+ ETS SA SS TK +S Q
Sbjct: 206 SENSKSSGKESESSAKGESETSAKGESKTSAKGESETSSSKSAG-GSSTSATKEESSASQ 264
Query: 53 SDALS 39
S ++
Sbjct: 265 SSGVT 269
>At2g30530.1 68415.m03718 expressed protein
Length = 371
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = -2
Query: 197 DKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSEDSS 27
+KD T T + +SSS+S +S +SA+ +A+ ++S+++ S S SS
Sbjct: 20 EKDKERMMTPTTRMSYSSSSSPSPSSASSSAASSLAAKAIRASSAHRDSSLSSAYSS 76
>At2g03470.2 68415.m00306 myb family transcription factor / ELM2
domain-containing protein contains Pfam profile: PF00249
Myb-like DNA-binding domain; contains Pfam profile:
PF01448 ELM2 domain
Length = 449
Score = 27.1 bits (57), Expect = 7.8
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -2
Query: 236 RGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASAS--RESSAEDTKSSNS 63
RG QN+ + D D E + F+S+ S+ E + + S ++ E+ SSN
Sbjct: 278 RGIQNRFKA---LDVDSDDDEWQVEYNIFNSTKSLDEEDNNGNRSSYEDNEEEEETSSND 334
Query: 62 NVQSDALSEDSSEVD 18
+ + + +DSS D
Sbjct: 335 DDEEEEEEDDSSSND 349
>At2g03470.1 68415.m00305 myb family transcription factor / ELM2
domain-containing protein contains Pfam profile: PF00249
Myb-like DNA-binding domain; contains Pfam profile:
PF01448 ELM2 domain
Length = 450
Score = 27.1 bits (57), Expect = 7.8
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Frame = -2
Query: 236 RGSQNQKSSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASAS--RESSAEDTKSSNS 63
RG QN+ + D D E + F+S+ S+ E + + S ++ E+ SSN
Sbjct: 279 RGIQNRFKA---LDVDSDDDEWQVEYNIFNSTKSLDEEDNNGNRSSYEDNEEEEETSSND 335
Query: 62 NVQSDALSEDSSEVD 18
+ + + +DSS D
Sbjct: 336 DDEEEEEEDDSSSND 350
>At1g48920.1 68414.m05480 nucleolin, putative similar to nuM1
protein GI:1279562 from [Medicago sativa]
Length = 557
Score = 27.1 bits (57), Expect = 7.8
Identities = 17/64 (26%), Positives = 26/64 (40%)
Frame = -2
Query: 215 SSSYRADKDGFSSSTNTEKSKFSSSNSVVETSDGASASRESSAEDTKSSNSNVQSDALSE 36
S S D D S + K + S +SD +S S E +ED + + SD
Sbjct: 216 SDSSDEDSDEESEDEKPAQKKADTKASKKSSSDESSESEEDESEDEEETPKKKSSDVEMV 275
Query: 35 DSSE 24
D+ +
Sbjct: 276 DAEK 279
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,702,493
Number of Sequences: 28952
Number of extensions: 180030
Number of successful extensions: 1096
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 977150592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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