Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0075.Seq
         (578 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    25   0.35 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.5  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.3  
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    21   5.7  

>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 25.4 bits (53), Expect = 0.35
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 106 ISHQEISM*REVCYHFFAHVLEILVEK 26
           I HQE+    + C  F  HV+ +L E+
Sbjct: 157 IYHQELEKYEQACNEFTTHVMNLLREQ 183


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 324 VFPCFNFDIMAQFYVVDVRWNFES*FFLKS 235
           VF C+N   +  FY V + +N    F L S
Sbjct: 47  VFKCYNLRRIYYFYCVSITFNVHLLFLLCS 76


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/38 (26%), Positives = 22/38 (57%)
 Frame = +1

Query: 205  NAKSIRPYSSGFEEKSAFKIPPYVDYVKLCHDVEIKTW 318
            NAK+  P  +G   ++A     ++ Y ++CH+++ + W
Sbjct: 1658 NAKAPGPGQAGEYTRAA----GFLAYYEICHNIKTQGW 1691


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 11/41 (26%), Positives = 16/41 (39%)
 Frame = -3

Query: 492 HSERQLFVYDTSCGWRNVTSLHRSFNPDSCQEFHVTRGFVN 370
           H+     V D   GW+N+ S      P   + FH     +N
Sbjct: 666 HNPNYAEVTDWYTGWKNMLSDELLAQPTIKENFHTALEIMN 706


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 13/45 (28%), Positives = 21/45 (46%)
 Frame = +1

Query: 442 VPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIRKAT 576
           VPP  + IIN Q  +T  ++ +     T+     S+ L  + K T
Sbjct: 409 VPPMQSQIINPQPQITSPSNTNTSTSSTNSNKPNSSDLNMLIKET 453


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 489 YES*QTLYERSDRPYAFN 542
           Y+  + +++ SDRP  FN
Sbjct: 23  YQELRDIFQDSDRPITFN 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,007
Number of Sequences: 336
Number of extensions: 3052
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14412858
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)