Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= msgV0075.Seq
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical ... 74 8e-14
Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical pr... 65 4e-11
Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical pr... 65 4e-11
Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical ... 56 1e-08
AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin (... 55 4e-08
Z66520-1|CAA91388.1| 655|Caenorhabditis elegans Hypothetical pr... 54 1e-07
U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 52 2e-07
U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical pr... 51 5e-07
U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical pr... 51 5e-07
U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical pr... 49 3e-06
U42833-1|AAA83575.1| 724|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z81486-2|CAB03984.1| 461|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z34799-3|CAA84316.3| 539|Caenorhabditis elegans Hypothetical pr... 29 3.2
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 29 3.2
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 29 3.2
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 29 3.2
AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical ... 28 4.2
U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defe... 27 7.3
U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defe... 27 7.3
AF098996-2|AAC68711.3| 431|Caenorhabditis elegans Hypothetical ... 27 7.3
AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-ty... 27 7.3
Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical pr... 27 9.6
>AF025463-7|AAB71007.1| 1210|Caenorhabditis elegans Hypothetical
protein K10B4.1 protein.
Length = 1210
Score = 73.7 bits (173), Expect = 8e-14
Identities = 36/105 (34%), Positives = 58/105 (55%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGY 441
IPPY Y C + ++ + I+ D + ++ ++YE+P D++L GI E+ + GG
Sbjct: 1078 IPPYNHYRSFCGLSRLTSFYSIFSDINQDGLTAIGKVYESPDDIDLFTGIVSEKTIPGGI 1137
Query: 442 VPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIRKAT 576
V PTAACII +Q K DR + D + ++QL E+RK +
Sbjct: 1138 VGPTAACIIAEQFRRLKKCDRFYYENGEDHSKFSASQLKEVRKTS 1182
Score = 50.0 bits (114), Expect = 1e-06
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVEL-LAGIWIERPMEGG 438
I Y + K C E+KT++D++ ID + ++SL+++Y DV+L L GI E P+ G
Sbjct: 402 IATYSQWRKECGGGELKTYEDLIDLIDSNILKSLRDLYPDVLDVDLILLGI-AENPVYGS 460
Query: 439 YVPPTAACIINKQLSLTMKADRH 507
+ PT CI+ Q T D +
Sbjct: 461 LLGPTFGCIMALQFQKTKFGDTY 483
>Z49130-8|CAA88973.1| 1490|Caenorhabditis elegans Hypothetical protein
T06D8.10 protein.
Length = 1490
Score = 64.9 bits (151), Expect = 4e-11
Identities = 35/103 (33%), Positives = 48/103 (46%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGY 441
+ PY D + C W D+ +D D I LQ +YE+ DV+L G+ ERP+ G
Sbjct: 1269 VQPYNDLREFCGLRRAVKWDDLKGEMDQDNINILQSLYESVDDVDLFPGLVSERPLRGAL 1328
Query: 442 VPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIRK 570
+ T +CII +Q K DR + QL EIRK
Sbjct: 1329 LGTTMSCIIAEQFGRLKKCDRFYYENDNSAAKFTPGQLNEIRK 1371
Score = 61.3 bits (142), Expect = 5e-10
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLK-FIDMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
IP Y C I ++ D+ + F+ + E + Y DV+LL G+ E+P++G
Sbjct: 552 IPGYTALRASCGLGRIASFNDLREIFLPEVKFEQVSSAYTRVEDVDLLVGVLAEKPLKGS 611
Query: 439 YVPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIR 567
V PT ACII KQ+ T +ADR + + AQL+EIR
Sbjct: 612 LVGPTMACIIGKQMQRTRRADRFWYENYFAQSGFNEAQLSEIR 654
>Z49129-3|CAA88963.1| 1490|Caenorhabditis elegans Hypothetical protein
T06D8.10 protein.
Length = 1490
Score = 64.9 bits (151), Expect = 4e-11
Identities = 35/103 (33%), Positives = 48/103 (46%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGY 441
+ PY D + C W D+ +D D I LQ +YE+ DV+L G+ ERP+ G
Sbjct: 1269 VQPYNDLREFCGLRRAVKWDDLKGEMDQDNINILQSLYESVDDVDLFPGLVSERPLRGAL 1328
Query: 442 VPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIRK 570
+ T +CII +Q K DR + QL EIRK
Sbjct: 1329 LGTTMSCIIAEQFGRLKKCDRFYYENDNSAAKFTPGQLNEIRK 1371
Score = 61.3 bits (142), Expect = 5e-10
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLK-FIDMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
IP Y C I ++ D+ + F+ + E + Y DV+LL G+ E+P++G
Sbjct: 552 IPGYTALRASCGLGRIASFNDLREIFLPEVKFEQVSSAYTRVEDVDLLVGVLAEKPLKGS 611
Query: 439 YVPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIR 567
V PT ACII KQ+ T +ADR + + AQL+EIR
Sbjct: 612 LVGPTMACIIGKQMQRTRRADRFWYENYFAQSGFNEAQLSEIR 654
>Z81056-3|CAB02910.1| 718|Caenorhabditis elegans Hypothetical
protein F09F3.5 protein.
Length = 718
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/104 (25%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Frame = +1
Query: 268 PYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGYVP 447
PY+ Y +L + ++ ++ + I++L+ +Y P D++L GI +E P+ GG +
Sbjct: 572 PYIQYRQLVGLPTVTSFNELNTTFSQENIQALRNVYSDPADIDLYVGIMLEEPLSGGQLG 631
Query: 448 PTAACIINKQLSLTMKADRHCMRDRTDPTLSMS-AQLAEIRKAT 576
PTA+ +I +Q + DR + T + + +++E+R T
Sbjct: 632 PTASFMIGEQFRALKRGDRFFYESIAEGTDNFTQEEISELRNKT 675
>AF003385-2|AAB54249.1| 773|Caenorhabditis elegans Hypothetical
protein R08F11.7 protein.
Length = 773
Score = 56.4 bits (130), Expect = 1e-08
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +1
Query: 268 PYVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGYVP 447
PYV Y L + TW D+ + +L+ +Y P D++L G+ +E P+ GG +
Sbjct: 629 PYVKYRTLVGLSPVDTWNDLSSTFTAANLAALKTVYADPADIDLYTGLVMETPLAGGQLG 688
Query: 448 PTAACIINKQLSLTMKADRHCMRDRTDPTLSMS-AQLAEIRK 570
PTA+ II +Q DR + T+ + Q+ IR+
Sbjct: 689 PTASWIIAEQFRALKTGDRFYYENGVANTVGFTPTQIDAIRR 730
>AF022977-1|ABF71715.1| 1285|Caenorhabditis elegans Peroxidasin
(drosophila peroxidase)homolog protein 1 protein.
Length = 1285
Score = 54.8 bits (126), Expect = 4e-08
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDR-IESLQEIYETPGDVELLAGIWIERPMEGG 438
+P Y +Y K C+ W+DM +I D I+ L+ +Y P +++L G +E +E G
Sbjct: 1066 LPSYTEYRKFCNLPVPVQWEDMKGYIKDDMIIQKLRGLYGVPQNIDLWVGGIVEEKLENG 1125
Query: 439 YVPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIRKAT 576
PT ACII +Q DR D + QL EI+K T
Sbjct: 1126 LFGPTFACIIGEQFRKIRDGDRFWY--EKDGVFT-PEQLREIKKIT 1168
>Z66520-1|CAA91388.1| 655|Caenorhabditis elegans Hypothetical
protein F49E12.1 protein.
Length = 655
Score = 53.6 bits (123), Expect = 1e-07
Identities = 30/102 (29%), Positives = 51/102 (50%)
Frame = +1
Query: 271 YVDYVKLCHDVEIKTWKDMLKFIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGYVPP 450
Y DY + C+ I ++ D + D + + + ++Y TP D++ G +E+P G +
Sbjct: 513 YNDYRRFCNLRPITSFNDWPEVPDENVRQRIGQLYRTPDDLDFYVGGILEQPAAGSLLGA 572
Query: 451 TAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIRKAT 576
T AC+I KQ DR +P + S QLAE+++ T
Sbjct: 573 TFACVIGKQFERLRDGDRFYYE---NPGVFTSPQLAELKRTT 611
>U61948-1|AAB03144.2| 1432|Caenorhabditis elegans Hypothetical
protein C46A5.4 protein.
Length = 1432
Score = 53.2 bits (122), Expect = 1e-07
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLK-FIDMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
+P Y+ + C + ++ + F I + +YE+P D+++ G E+P +G
Sbjct: 494 LPSYLQWRTFCKLDDFSSFLALQTIFKPSVNISDFERLYESPEDIDVFVGGLSEQPTKGS 553
Query: 439 YVPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIRKAT 576
+ PT AC+ Q++ T + DR + P+ Q+ EIRK T
Sbjct: 554 LLGPTFACLFAHQMAQTKRGDRFWYENFVSPSAFTVDQIDEIRKTT 599
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical protein
K09C8.5 protein.
Length = 1328
Score = 52.4 bits (120), Expect = 2e-07
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDR-IESLQEIYETPGDVELLAGIWIERPMEGG 438
+P + +Y K C+ KTW DM + D I LQ +Y +++L G E+
Sbjct: 1101 LPSWTEYRKFCNLTVPKTWSDMKNIVQNDTVISKLQSLYGVTENIDLWVGGVTEKRTADA 1160
Query: 439 YVPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIRKAT 576
+ PT ACII Q DR + + AQL +I+K T
Sbjct: 1161 LMGPTLACIIADQFKRLRDGDRFWYENE---EMFSKAQLRQIKKVT 1203
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical protein
K09C8.5 protein.
Length = 1328
Score = 52.4 bits (120), Expect = 2e-07
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 1/106 (0%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFIDMDR-IESLQEIYETPGDVELLAGIWIERPMEGG 438
+P + +Y K C+ KTW DM + D I LQ +Y +++L G E+
Sbjct: 1101 LPSWTEYRKFCNLTVPKTWSDMKNIVQNDTVISKLQSLYGVTENIDLWVGGVTEKRTADA 1160
Query: 439 YVPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIRKAT 576
+ PT ACII Q DR + + AQL +I+K T
Sbjct: 1161 LMGPTLACIIADQFKRLRDGDRFWYENE---EMFSKAQLRQIKKVT 1203
>U20864-7|AAK68357.1| 859|Caenorhabditis elegans Hypothetical protein
F32A5.2b protein.
Length = 859
Score = 51.2 bits (117), Expect = 5e-07
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +1
Query: 265 PPYVDYVKLCHDVEIKTWKDMLK-FIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGY 441
P YV Y +LC ++ + + ++ LQEIY + ++L G +E P+ G
Sbjct: 716 PAYVKYRELCGMGTAFNFEHLSREILNTGTRNKLQEIYGSVDKIDLWVGALLEDPIIRGL 775
Query: 442 VPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIRKAT 576
V PT ACII Q T DR +P + QL EIRK++
Sbjct: 776 VGPTVACIIGPQFKRTRDGDRFYYE---NPGVFSRRQLVEIRKSS 817
>U20864-6|AAK68356.1| 1000|Caenorhabditis elegans Hypothetical protein
F32A5.2a protein.
Length = 1000
Score = 51.2 bits (117), Expect = 5e-07
Identities = 34/105 (32%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +1
Query: 265 PPYVDYVKLCHDVEIKTWKDMLK-FIDMDRIESLQEIYETPGDVELLAGIWIERPMEGGY 441
P YV Y +LC ++ + + ++ LQEIY + ++L G +E P+ G
Sbjct: 857 PAYVKYRELCGMGTAFNFEHLSREILNTGTRNKLQEIYGSVDKIDLWVGALLEDPIIRGL 916
Query: 442 VPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIRKAT 576
V PT ACII Q T DR +P + QL EIRK++
Sbjct: 917 VGPTVACIIGPQFKRTRDGDRFYYE---NPGVFSRRQLVEIRKSS 958
>U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical
protein C16C8.2 protein.
Length = 729
Score = 48.8 bits (111), Expect = 3e-06
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFI-DMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
+PPY + K C E+K ++ + + I + I++L+ +Y+ +++ G +E P++
Sbjct: 577 VPPYTVWRKFCGLPEVKDFEGLKQVISNQVVIDNLKVVYKHVDAIDMYVGSLLEDPVKDA 636
Query: 439 YVPPTAACIINKQLSLTMKADR 504
V PT +CII +Q T DR
Sbjct: 637 LVGPTLSCIIGEQFKRTRNGDR 658
>U42833-1|AAA83575.1| 724|Caenorhabditis elegans Hypothetical
protein ZK430.8 protein.
Length = 724
Score = 44.4 bits (100), Expect = 6e-05
Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Frame = +1
Query: 262 IPPYVDYVKLCHDVEIKTWKDMLKFI-DMDRIESLQEIYETPGDVELLAGIWIERPMEGG 438
IP Y + C T+ D I D + L Y T DV+ G +E P+ GG
Sbjct: 578 IPSYNKMRQFCGLKSANTFDDFADMILDRNLRAGLARNYNTTNDVDFYVGSMLEDPVIGG 637
Query: 439 YVPPTAACIINKQLSLTMKADRHCMRDRTDPTLSMSAQLAEIRKAT 576
V T +C I +Q DR +P + +Q+ EI+K++
Sbjct: 638 LVGTTLSCAIGEQFKRARDGDRFYFE---NPGIFTRSQMEEIKKSS 680
>Z81486-2|CAB03984.1| 461|Caenorhabditis elegans Hypothetical
protein C53A5.3 protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +1
Query: 193 GIRNNAKSIRPYSSGFEEKSAFKIPPYVDYVKLCHDVEIKTW-KDMLKF 336
G+ N + RP+ + FE+ + F Y+ ++K + +K++ K MLKF
Sbjct: 50 GLYRNLEIFRPFPASFEDMTRFHSDEYMTFLKSANPDNLKSFNKQMLKF 98
>Z34799-3|CAA84316.3| 539|Caenorhabditis elegans Hypothetical
protein F34D10.6 protein.
Length = 539
Score = 28.7 bits (61), Expect = 3.2
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 4/91 (4%)
Frame = +2
Query: 65 VTDLSLHTDFLMRDKNLAKMTRGTYYQAGGDNDRAVDPAICDKGLGIMQKASDLT----A 232
V ++ H D + + L G + ++DR++ IC++ +G+++ T A
Sbjct: 143 VPNIPEHLDLIKKLSLLQSQVLGIWDAVAAEDDRSLKQLICERQMGLVRDRDGRTPLHHA 202
Query: 233 ADLRKNQLSKFHLTSTT*NCAMMSKLKHGKT 325
R+N+L ++ L + + K +HGKT
Sbjct: 203 YMKRRNELIEYLLYICPDSANI--KDRHGKT 231
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 336 EFQHVFPCFNFDIMAQFYVVDVRWNFES*FF 244
EF+HVF +FD++ + + + W F S FF
Sbjct: 241 EFEHVFSDLSFDVLFKRLLNFMCWRFPSQFF 271
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 336 EFQHVFPCFNFDIMAQFYVVDVRWNFES*FF 244
EF+HVF +FD++ + + + W F S FF
Sbjct: 241 EFEHVFSDLSFDVLFKRLLNFMCWRFPSQFF 271
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -3
Query: 336 EFQHVFPCFNFDIMAQFYVVDVRWNFES*FF 244
EF+HVF +FD++ + + + W F S FF
Sbjct: 241 EFEHVFSDLSFDVLFKRLLNFMCWRFPSQFF 271
>AL031635-1|CAA21039.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.1 protein.
Length = 487
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = +1
Query: 307 IKTWKDMLKFIDMDR-IESLQEIYETPGD-VELLAGIWIERPMEG 435
+K W D++ F D+D + L +PGD +++L I+ E P G
Sbjct: 223 VKPWSDIVVFSDIDDFLLPLDPSTISPGDNLQILKNIFAEHPQAG 267
>U61951-3|AAB03158.4| 1783|Caenorhabditis elegans Egg laying defective
protein 19,isoform a protein.
Length = 1783
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -3
Query: 408 SCQEFHVTRGFVNFLQTFNSIHVNEFQHVFPCFNFDIMAQFYVVDVRWN 262
+C+ + +RGF +FL FN I F + + Y+ D RWN
Sbjct: 1135 ACKHYPSSRGFEDFLDVFNLIFTGVFAFEAVLKIVALNPKNYISD-RWN 1182
>U61951-2|AAM75372.1| 1877|Caenorhabditis elegans Egg laying defective
protein 19,isoform b protein.
Length = 1877
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -3
Query: 408 SCQEFHVTRGFVNFLQTFNSIHVNEFQHVFPCFNFDIMAQFYVVDVRWN 262
+C+ + +RGF +FL FN I F + + Y+ D RWN
Sbjct: 1135 ACKHYPSSRGFEDFLDVFNLIFTGVFAFEAVLKIVALNPKNYISD-RWN 1182
>AF098996-2|AAC68711.3| 431|Caenorhabditis elegans Hypothetical
protein T11F1.6 protein.
Length = 431
Score = 27.5 bits (58), Expect = 7.3
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 423 SFNPDSCQEFHVTRGFVNFLQTFNSIHVN 337
+ +PD C FH GF++ F +IH N
Sbjct: 300 NLHPDFCLTFHEMIGFLDAQVYFKNIHAN 328
>AF023602-1|AAC47755.1| 1783|Caenorhabditis elegans putative L-type
calcium channelalpha 1 subunit protein.
Length = 1783
Score = 27.5 bits (58), Expect = 7.3
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -3
Query: 408 SCQEFHVTRGFVNFLQTFNSIHVNEFQHVFPCFNFDIMAQFYVVDVRWN 262
+C+ + +RGF +FL FN I F + + Y+ D RWN
Sbjct: 1135 ACKHYPSSRGFEDFLDVFNLIFTGVFAFEAVLKIVALNPKNYISD-RWN 1182
>Z83127-5|CAB05628.2| 575|Caenorhabditis elegans Hypothetical
protein T23F6.5 protein.
Length = 575
Score = 27.1 bits (57), Expect = 9.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 474 FVYDTSCGWRNVTSLHRSFN 415
F DT CGW ++ L R FN
Sbjct: 443 FEKDTKCGWADLRMLSRHFN 462
>Z83118-1|CAB05575.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 188 HKWP-GLQLYHYLLQPDSKFLVSFLPSSYL 102
H W G+++ YLL P F + FLP++ L
Sbjct: 120 HTWSLGVEMQFYLLAPFIFFAIQFLPNTTL 149
>Z81552-6|CAB04489.1| 975|Caenorhabditis elegans Hypothetical
protein F56G4.1 protein.
Length = 975
Score = 27.1 bits (57), Expect = 9.6
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -1
Query: 188 HKWP-GLQLYHYLLQPDSKFLVSFLPSSYL 102
H W G+++ YLL P F + FLP++ L
Sbjct: 120 HTWSLGVEMQFYLLAPFIFFAIQFLPNTTL 149
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,814,320
Number of Sequences: 27780
Number of extensions: 296695
Number of successful extensions: 722
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 722
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -