Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0074.Seq
         (603 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7RAY7 Cluster: Putative uncharacterized protein PY0636...    40   0.045
UniRef50_UPI00004996D6 Cluster: protein kinase; n=2; Entamoeba h...    36   0.74 
UniRef50_A5DZJ3 Cluster: Putative uncharacterized protein; n=1; ...    35   1.3  
UniRef50_Q8IDL5 Cluster: Putative uncharacterized protein PF13_0...    34   2.3  
UniRef50_Q8I3P2 Cluster: Putative uncharacterized protein PFE110...    33   3.9  
UniRef50_Q8D281 Cluster: Undecaprenyl-diphosphatase; n=1; Wiggle...    33   5.2  
UniRef50_Q876N4 Cluster: Autophagy-related protein 9; n=1; Pichi...    33   6.9  

>UniRef50_Q7RAY7 Cluster: Putative uncharacterized protein PY06362;
            n=7; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY06362 - Plasmodium yoelii yoelii
          Length = 1422

 Score = 39.9 bits (89), Expect = 0.045
 Identities = 22/72 (30%), Positives = 37/72 (51%)
 Frame = -2

Query: 395  ILVL*NLKICFNLILSIREEHLKQIRKSLNTS*GYLKDNNVKRLFVIILYNIRNYVISIY 216
            ++VL  +K C N +LS+    +K +           ++NN+K   + IL  +  Y+ SIY
Sbjct: 1223 VIVLDLIKCCDNPLLSLSTMFIKNLTHLFFDILNKKQENNIKETCLFILRYMIKYIFSIY 1282

Query: 215  *YVFSSYLHYVY 180
             YV +S  H +Y
Sbjct: 1283 NYVNNSCFHLLY 1294


>UniRef50_UPI00004996D6 Cluster: protein kinase; n=2; Entamoeba
           histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
           histolytica HM-1:IMSS
          Length = 1726

 Score = 35.9 bits (79), Expect = 0.74
 Identities = 18/46 (39%), Positives = 25/46 (54%)
 Frame = -2

Query: 140 CILGTIYSILKTCVFEKLSTDAYLGNSILLTYIVEQSLIKNNSEYK 3
           CI+    +I +T VFEK  T+ YLGN I++    E+       EYK
Sbjct: 542 CIINITRTIEETVVFEKTETEVYLGNDIIILNEYEECTNLIFDEYK 587


>UniRef50_A5DZJ3 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 793

 Score = 35.1 bits (77), Expect = 1.3
 Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
 Frame = +2

Query: 17  YSLLNFVQQYMLIK*NFLNKH-LSTTFRTRM--SSKLNKLFPKYIFPFILEIINQ*NN-K 184
           + LLNF     +IK +FLN + L+ T  T +   + +  +  +YI P + EI N  NN  
Sbjct: 11  FILLNFTLFIQIIKVSFLNSNKLTATISTSLLVIASVYYISTQYIIPKLTEITNNNNNPN 70

Query: 185 HSANTN*RHINIL 223
           +S N+N +  NIL
Sbjct: 71  NSDNSNYQSNNIL 83


>UniRef50_Q8IDL5 Cluster: Putative uncharacterized protein PF13_0254;
            n=2; Plasmodium|Rep: Putative uncharacterized protein
            PF13_0254 - Plasmodium falciparum (isolate 3D7)
          Length = 3855

 Score = 34.3 bits (75), Expect = 2.3
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = -2

Query: 377  LKICFNLILSIREEHLKQIRKSLNTS*GYLKDNNVKRLFVIILYNIRNYVISIY*YVFSS 198
            +K C N   +I  + +K I            DNN+K   + +L  I  Y+ +IY Y+ + 
Sbjct: 1392 IKCCDNPRFNISSQFIKNIIHIFFDIINKKYDNNIKETCLYLLRYIFKYIFNIYNYINNF 1451

Query: 197  YLHYVYY 177
              H +YY
Sbjct: 1452 SYHMLYY 1458


>UniRef50_Q8I3P2 Cluster: Putative uncharacterized protein PFE1105c;
           n=4; Plasmodium|Rep: Putative uncharacterized protein
           PFE1105c - Plasmodium falciparum (isolate 3D7)
          Length = 763

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
 Frame = +2

Query: 77  HLSTTFRTRMSSKLNKLFPKYIFPFILEIINQ*N-NKHSANTN*RHINILKSHNYEYCI 250
           HL   F+  M SK    + + I+P     IN  N N    +   R  N+  SH ++YC+
Sbjct: 472 HLCNEFKNDMQSKNKLTYVEKIYPTNYHYINNYNKNNEDISIEQRRYNMNSSHIFDYCL 530


>UniRef50_Q8D281 Cluster: Undecaprenyl-diphosphatase; n=1;
           Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis|Rep: Undecaprenyl-diphosphatase -
           Wigglesworthia glossinidia brevipalpis
          Length = 267

 Score = 33.1 bits (72), Expect = 5.2
 Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 4/148 (2%)
 Frame = -2

Query: 461 NAQIQIIRYFICIKQSKIYLD*ILVL*NLKICFNLILSIREEHLKQIRKSLNTS*GYLKD 282
           N  + +I Y   I +  I    I+ +  +   F++IL  +E+    I+KS+     Y   
Sbjct: 25  NGHLILINYIFNIDKENIQN--IIKIIQIGPIFSIILLFKEK----IKKSITFF--YFNI 76

Query: 281 NNVKRLFVIILYNIRNYVISIY*YVFSSYLHYVYYSID*LFLK*KEI---CILGTIYSIL 111
           NN+K+  ++IL+N+    I I      S L +++Y     F   K I    ILG+I+ IL
Sbjct: 77  NNIKKKLILILFNLVLSCIPI------SILGFMFYKKLEEFYSPKYISYFLILGSIFFIL 130

Query: 110 KTCV-FEKLSTDAYLGNSILLTYIVEQS 30
              +  +K+  D +   S L  +I+  S
Sbjct: 131 SEFISLKKIKIDNFKKISFLKYFIIGSS 158


>UniRef50_Q876N4 Cluster: Autophagy-related protein 9; n=1; Pichia
           pastoris|Rep: Autophagy-related protein 9 - Pichia
           pastoris (Yeast)
          Length = 885

 Score = 32.7 bits (71), Expect = 6.9
 Identities = 15/37 (40%), Positives = 27/37 (72%)
 Frame = -2

Query: 431 ICIKQSKIYLD*ILVL*NLKICFNLILSIREEHLKQI 321
           +C+K  +I+LD  LVL ++K+ FNL+L + ++ L+ I
Sbjct: 286 LCLKLYQIFLD-YLVLKDMKLFFNLLLGLSDDELQTI 321


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,522,430
Number of Sequences: 1657284
Number of extensions: 8526902
Number of successful extensions: 15715
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15709
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 42732687689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)