Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0074.Seq
         (603 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical p...    27   7.8  
Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical p...    27   7.8  
Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical pr...    27   7.8  
Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical pr...    27   7.8  
AF016664-8|AAY44018.1|  397|Caenorhabditis elegans Hypothetical ...    27   7.8  

>Z92779-4|CAE11294.1| 1816|Caenorhabditis elegans Hypothetical protein
            ZK524.2e protein.
          Length = 1816

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +2

Query: 128  FPKYIFPFILEIINQ*NNKHSANTN*RHINILKSHNY 238
            FP +  PF+++ +N+ N++HS +      N+ K+ N+
Sbjct: 1261 FPAWFIPFVMDWLNE-NDEHSMDILRNAYNVDKADNF 1296


>Z92779-3|CAD90173.2| 2155|Caenorhabditis elegans Hypothetical protein
            ZK524.2d protein.
          Length = 2155

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +2

Query: 128  FPKYIFPFILEIINQ*NNKHSANTN*RHINILKSHNY 238
            FP +  PF+++ +N+ N++HS +      N+ K+ N+
Sbjct: 1600 FPAWFIPFVMDWLNE-NDEHSMDILRNAYNVDKADNF 1635


>Z92779-2|CAD56561.2| 1475|Caenorhabditis elegans Hypothetical protein
            ZK524.2c protein.
          Length = 1475

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +2

Query: 128  FPKYIFPFILEIINQ*NNKHSANTN*RHINILKSHNY 238
            FP +  PF+++ +N+ N++HS +      N+ K+ N+
Sbjct: 920  FPAWFIPFVMDWLNE-NDEHSMDILRNAYNVDKADNF 955


>Z92779-1|CAB07173.1| 1813|Caenorhabditis elegans Hypothetical protein
            ZK524.2a protein.
          Length = 1813

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +2

Query: 128  FPKYIFPFILEIINQ*NNKHSANTN*RHINILKSHNY 238
            FP +  PF+++ +N+ N++HS +      N+ K+ N+
Sbjct: 1258 FPAWFIPFVMDWLNE-NDEHSMDILRNAYNVDKADNF 1293


>Z79694-11|CAE11299.1| 1816|Caenorhabditis elegans Hypothetical
            protein ZK524.2e protein.
          Length = 1816

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +2

Query: 128  FPKYIFPFILEIINQ*NNKHSANTN*RHINILKSHNY 238
            FP +  PF+++ +N+ N++HS +      N+ K+ N+
Sbjct: 1261 FPAWFIPFVMDWLNE-NDEHSMDILRNAYNVDKADNF 1296


>Z79694-10|CAD90170.2| 2155|Caenorhabditis elegans Hypothetical
            protein ZK524.2d protein.
          Length = 2155

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +2

Query: 128  FPKYIFPFILEIINQ*NNKHSANTN*RHINILKSHNY 238
            FP +  PF+++ +N+ N++HS +      N+ K+ N+
Sbjct: 1600 FPAWFIPFVMDWLNE-NDEHSMDILRNAYNVDKADNF 1635


>Z79694-9|CAB01966.1| 1813|Caenorhabditis elegans Hypothetical protein
            ZK524.2a protein.
          Length = 1813

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +2

Query: 128  FPKYIFPFILEIINQ*NNKHSANTN*RHINILKSHNY 238
            FP +  PF+++ +N+ N++HS +      N+ K+ N+
Sbjct: 1258 FPAWFIPFVMDWLNE-NDEHSMDILRNAYNVDKADNF 1293


>Z73912-7|CAE11317.1| 1816|Caenorhabditis elegans Hypothetical protein
            ZK524.2e protein.
          Length = 1816

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +2

Query: 128  FPKYIFPFILEIINQ*NNKHSANTN*RHINILKSHNY 238
            FP +  PF+++ +N+ N++HS +      N+ K+ N+
Sbjct: 1261 FPAWFIPFVMDWLNE-NDEHSMDILRNAYNVDKADNF 1296


>Z73912-6|CAD90190.2| 2155|Caenorhabditis elegans Hypothetical protein
            ZK524.2d protein.
          Length = 2155

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +2

Query: 128  FPKYIFPFILEIINQ*NNKHSANTN*RHINILKSHNY 238
            FP +  PF+++ +N+ N++HS +      N+ K+ N+
Sbjct: 1600 FPAWFIPFVMDWLNE-NDEHSMDILRNAYNVDKADNF 1635


>Z73912-5|CAD56619.2| 1475|Caenorhabditis elegans Hypothetical protein
            ZK524.2c protein.
          Length = 1475

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +2

Query: 128  FPKYIFPFILEIINQ*NNKHSANTN*RHINILKSHNY 238
            FP +  PF+++ +N+ N++HS +      N+ K+ N+
Sbjct: 920  FPAWFIPFVMDWLNE-NDEHSMDILRNAYNVDKADNF 955


>Z73912-4|CAA98147.1| 1813|Caenorhabditis elegans Hypothetical protein
            ZK524.2a protein.
          Length = 1813

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +2

Query: 128  FPKYIFPFILEIINQ*NNKHSANTN*RHINILKSHNY 238
            FP +  PF+++ +N+ N++HS +      N+ K+ N+
Sbjct: 1258 FPAWFIPFVMDWLNE-NDEHSMDILRNAYNVDKADNF 1293


>AF016664-8|AAY44018.1|  397|Caenorhabditis elegans Hypothetical
           protein D2062.12 protein.
          Length = 397

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +3

Query: 456 SVILIVWASFAENKKQHTTISCFKSGKLQEI*SRDHKI 569
           +++L+ W  F+ N + HT  + F      EI S+  K+
Sbjct: 332 TIVLLAWKVFSINTRSHTVFTAFPEYFDDEITSKKEKL 369


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,853,556
Number of Sequences: 27780
Number of extensions: 222035
Number of successful extensions: 363
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)