Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0073.Seq
         (538 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   3.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   3.9  
AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    22   3.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   3.9  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    21   6.9  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    21   6.9  
AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esteras...    21   6.9  
AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esteras...    21   6.9  
AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esteras...    21   6.9  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   6.9  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   9.1  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 39  HTAHLMVSGYRRPWTSAMPGAEPS 110
           +T H+   G+  P+T  M G E S
Sbjct: 486 YTIHMGYHGFHNPFTCNMCGVECS 509


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1

Query: 274 FVMPDIISY*VRFXRSFLPRTIRLWNELPST 182
           F    +  + VRF +     T++LW++L ST
Sbjct: 74  FATKKLEQFIVRFMKYHFFGTLKLWSQLFST 104


>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +1

Query: 103 SQAAAYRLILSISLV*RRTCHSARETPWR 189
           SQ+     +  +SLV RR      E PWR
Sbjct: 219 SQSPEPESVRPLSLVVRRCEEPTEEKPWR 247


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -2

Query: 75  GDGNHSPSGGP 43
           G GN+ P GGP
Sbjct: 530 GSGNNQPPGGP 540


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 157 SFFKRGLWRVLSGRQRLGSAP 95
           +FF R +WR +    +  S P
Sbjct: 387 NFFLREIWRTVKYHNKTSSVP 407


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 157 SFFKRGLWRVLSGRQRLGSAP 95
           +FF R +WR +    +  S P
Sbjct: 387 NFFLREIWRTVKYHNKTSSVP 407


>AJ850289-1|CAH64509.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 157 SFFKRGLWRVLSGRQRLGSAP 95
           +FF R +WR +    +  S P
Sbjct: 387 NFFLREIWRTVKYHNKTSSVP 407


>AJ850288-1|CAH64508.1|  510|Tribolium castaneum putative esterase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 157 SFFKRGLWRVLSGRQRLGSAP 95
           +FF R +WR +    +  S P
Sbjct: 387 NFFLREIWRTVKYHNKTSSVP 407


>AJ850287-1|CAH64507.1|  509|Tribolium castaneum putative esterase
           protein.
          Length = 509

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 157 SFFKRGLWRVLSGRQRLGSAP 95
           +FF R +WR +    +  S P
Sbjct: 386 NFFLREIWRTVKYHNKTSSVP 406


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 6.9
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -2

Query: 219 HXPSGYGMSSPPRCFPSAMTCPSSN 145
           H P  Y    PP   PS    P SN
Sbjct: 24  HSPEPYPPRCPPIYEPSCQYSPVSN 48


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 90  MPGAEPSRCLPLNTLHKPRLKKDMS*RSGNT 182
           M G  PS   P N +  P+++   + ++G+T
Sbjct: 157 MHGYHPSSSYPANEISCPQVQWSATPQAGST 187


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,663
Number of Sequences: 336
Number of extensions: 1975
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13097125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)