Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= msgV0073.Seq
         (538 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    27   0.30 
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    23   6.5  
AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450 CY...    23   6.5  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    23   6.5  

>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 27.5 bits (58), Expect = 0.30
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 133 RVLSGRQRLGSAPGIAEVHGRR*P 62
           R  +GR R G  PG AE H RR P
Sbjct: 315 REAAGRLRTGPVPGAAERHRRRRP 338


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 47  PPDGEWLPSPMDFSNARG 100
           PPD  W P  + F+NA G
Sbjct: 104 PPDKVWKPDIVLFNNADG 121


>AY062206-1|AAL58567.1|  193|Anopheles gambiae cytochrome P450
           CYP4H24 protein.
          Length = 193

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +3

Query: 111 RCLPLNTLHKPRLKKDMS*RSGNTV 185
           R LP +T+H+ RLK D+  R   ++
Sbjct: 161 RILPGDTMHEIRLKTDLVLRPDKSI 185


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 6.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +2

Query: 53  DGEWLPSPMDFSNARGRAKP 112
           DGEW P  +D    +G  KP
Sbjct: 255 DGEWEPPMIDNPEYKGEWKP 274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 476,208
Number of Sequences: 2352
Number of extensions: 8230
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 49897362
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)